Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30186
         (664 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    44   0.003
UniRef50_A5K763 Cluster: Putative uncharacterized protein; n=4; ...    36   0.66 
UniRef50_A6EDD2 Cluster: Sensor protein; n=1; Pedobacter sp. BAL...    36   1.1  
UniRef50_Q483D3 Cluster: Glucose-6-phosphate isomerase 2; n=1; C...    35   1.5  
UniRef50_A0E2Z8 Cluster: Chromosome undetermined scaffold_75, wh...    34   2.7  
UniRef50_Q23CS0 Cluster: Putative uncharacterized protein; n=1; ...    33   8.1  
UniRef50_A5K8C1 Cluster: Putative uncharacterized protein; n=1; ...    33   8.1  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = -1

Query: 658 FLMLR*VDELTAHLVLRGYWSP 593
           FL+LR VDELTAHLVL GYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A5K763 Cluster: Putative uncharacterized protein; n=4;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 2726

 Score = 36.3 bits (80), Expect = 0.66
 Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
 Frame = +3

Query: 48   LKIYIFFSR*NIEEWN-VRFRIIRDIYLCN*RSLLFVNTINNSVFLIEFTHSNI*RRCFV 224
            L + ++ S   +E+ N + F++I  +Y+    SLL++ ++NN VF+ E+      R  + 
Sbjct: 1373 LSVCLYCSFKKLEKKNEINFKLINHVYVNTFSSLLYITSLNNLVFIYEYGSGRFLRSLYD 1432

Query: 225  IIFFPNFKL*WRSCKIAKMALKRNSFSFLN-IKATAGEHSKIQR 353
              F     +   +C + K+ +   S   LN ++A  GE ++  R
Sbjct: 1433 SDFAGMSVVPTETCHM-KLGVDVTSVRILNRVRAGGGEVTRAVR 1475


>UniRef50_A6EDD2 Cluster: Sensor protein; n=1; Pedobacter sp.
           BAL39|Rep: Sensor protein - Pedobacter sp. BAL39
          Length = 815

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -2

Query: 150 IKGTFNYKDKCRELFGISHSTP 85
           IKGT ++ D+CR LFGISH  P
Sbjct: 485 IKGTMDWDDRCRLLFGISHHEP 506


>UniRef50_Q483D3 Cluster: Glucose-6-phosphate isomerase 2; n=1;
           Colwellia psychrerythraea 34H|Rep: Glucose-6-phosphate
           isomerase 2 - Colwellia psychrerythraea (strain 34H /
           ATCC BAA-681) (Vibriopsychroerythus)
          Length = 551

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 23/74 (31%), Positives = 36/74 (48%)
 Frame = -1

Query: 412 ILDKLFIHLTTSLANK*LVNLWILECSPAVALILRNEKLLRLSAIFAILQERH*SLKFGK 233
           ++ K F    T L  K  V  W+L C+    L L N  L+     FA+      + +FG 
Sbjct: 195 VISKTFTTQETMLNAK-AVKQWMLSCASVKDLELNNVPLIIEKQWFAVSSNIEAAKEFGI 253

Query: 232 NMITKHLLQIFEWV 191
           N+  KH+L +++WV
Sbjct: 254 NI--KHILPMWDWV 265


>UniRef50_A0E2Z8 Cluster: Chromosome undetermined scaffold_75, whole
            genome shotgun sequence; n=27; Eukaryota|Rep: Chromosome
            undetermined scaffold_75, whole genome shotgun sequence -
            Paramecium tetraurelia
          Length = 2818

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = -1

Query: 412  ILDKLFIHLTTSLANK*LVNLWILECSPAVALILRNEKLLRL 287
            IL   F    TS   K L+ LWI E    V  +L+NEKL+R+
Sbjct: 1138 ILSNCFSGSLTSFCQKVLIQLWIQEKDLKVRNLLKNEKLMRI 1179


>UniRef50_Q23CS0 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2072

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +1

Query: 229  YFFQILNFNGALVKLQK-WRLNVIAFHSSILKQ 324
            +FF IL FN ++V+L K W LNV+A +  +L Q
Sbjct: 1445 FFFFILLFNTSIVQLVKVWNLNVLAGYDVVLNQ 1477


>UniRef50_A5K8C1 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3459

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +3

Query: 219  FVIIFFPNFKL*WRSCKIAKMALKRNSFSFLNIKATAGEHSKIQRFTNH 365
            F + F P+ KL  RS KI    L+++S++F+N  A   +H       NH
Sbjct: 2936 FCLCFSPDMKLKCRSEKIINCILEKDSYNFVNGLAECLQHMLFYLIENH 2984


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,152,547
Number of Sequences: 1657284
Number of extensions: 11781485
Number of successful extensions: 22245
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22241
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)