Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30186
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   6.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   6.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   6.8  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.0  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 566 YKF*GSQYSYNGCS 525
           Y F G+ Y Y GCS
Sbjct: 17  YPFQGTTYKYTGCS 30


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 119 VANYSESHIPLLDVLPTKKNIYLQFYSFHSV 27
           +A+Y    + L D+L    N Y + YS +S+
Sbjct: 224 IAHYRVLWLSLSDLLQKMGNAYARTYSTYSL 254


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 119 VANYSESHIPLLDVLPTKKNIYLQFYSFHSV 27
           +A+Y    + L D+L    N Y + YS +S+
Sbjct: 224 IAHYRVLWLSLSDLLQKMGNAYARTYSTYSL 254


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 119 VANYSESHIPLLDVLPTKKNIYLQFYSFHSV 27
           +A+Y    + L D+L    N Y + YS +S+
Sbjct: 224 IAHYRVLWLSLSDLLQKMGNAYARTYSTYSL 254


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 560 TYISRWVAHLRWAPV 604
           T  S+W+AH  +AP+
Sbjct: 251 TIDSQWLAHWAFAPI 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,681
Number of Sequences: 336
Number of extensions: 3296
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)