Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30186
         (664 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_51627| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.017)         32   0.36 
SB_59101| Best HMM Match : PT (HMM E-Value=0.026)                      28   7.8  

>SB_51627| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.017)
          Length = 340

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
 Frame = +1

Query: 121 FIFVIKGPFYLLILSTIRCF*LSLPIQISEEDV--LLSYFFQILN-FN---GALVKLQKW 282
           FI VI+ PF  +    IR   L   I+ S+  +    S  F+IL  FN   G  V ++KW
Sbjct: 199 FIHVIRNPFDNISTMLIRTKKLRHDIERSKGKINDTESLEFEILRYFNLAAGNEVLIEKW 258

Query: 283 RLNVIAFHSSILKQRLGSTLR 345
           R N++  HS  L  +   T+R
Sbjct: 259 RENILEIHSKDLISKPRDTIR 279


>SB_59101| Best HMM Match : PT (HMM E-Value=0.026)
          Length = 386

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +3

Query: 222 VIIFFPNFKL*WRSCKIAKMALKRNSFSFLNIKATAGEHSKIQRFTNHLF 371
           VI F P F   W +C  A     R   + LNI  T+  H  +    +H F
Sbjct: 71  VIPFSPQFNSYW-NCMAATSNATRTEDASLNITVTSYNHPPVATVVSHAF 119


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,245,854
Number of Sequences: 59808
Number of extensions: 370340
Number of successful extensions: 581
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)