Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30184
(565 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 23 2.4
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 22 4.2
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 22 4.2
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 22 4.2
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 22 4.2
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 22 4.2
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 5.5
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 21 7.3
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 9.6
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 21 9.6
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 21 9.6
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 21 9.6
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 310 RHIQTCNEFP*GIFEATCK 366
+H +C P GIF++TCK
Sbjct: 111 KHNGSCLYVPPGIFKSTCK 129
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 198 QDIRMLPNKLFYLDI 154
+D+R+ PNKL+ D+
Sbjct: 76 KDLRITPNKLWKPDV 90
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 310 RHIQTCNEFP*GIFEATCK 366
+H +C P GIF++TCK
Sbjct: 111 KHNGSCLYVPPGIFKSTCK 129
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 198 QDIRMLPNKLFYLDI 154
+D+R+ PNKL+ D+
Sbjct: 76 KDLRITPNKLWKPDV 90
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 310 RHIQTCNEFP*GIFEATCK 366
+H +C P GIF++TCK
Sbjct: 111 KHGGSCLYVPPGIFKSTCK 129
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 198 QDIRMLPNKLFYLDI 154
+D+R+ PNKL+ D+
Sbjct: 76 KDLRITPNKLWKPDV 90
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 310 RHIQTCNEFP*GIFEATCK 366
+H +C P GIF++TCK
Sbjct: 111 KHGGSCLYVPPGIFKSTCK 129
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 198 QDIRMLPNKLFYLDI 154
+D+R+ PNKL+ D+
Sbjct: 76 KDLRITPNKLWKPDV 90
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 310 RHIQTCNEFP*GIFEATCK 366
+H +C P GIF++TCK
Sbjct: 111 KHGGSCLYVPPGIFKSTCK 129
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 198 QDIRMLPNKLFYLDI 154
+D+R+ PNKL+ D+
Sbjct: 76 KDLRITPNKLWKPDV 90
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 22.6 bits (46), Expect = 2.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 320 KHATNFLKEYLKQHANSPKDVQPSGEGKK 406
K ATN L+ +L QH P PS + KK
Sbjct: 343 KVATNILRAWLFQHLTHP---YPSEDQKK 368
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +2
Query: 326 ATNFLKEYLKQHANSPKDVQPSGEG 400
A F+K+Y++ +P + G+G
Sbjct: 175 ALKFIKKYIQHFGGTPDSITLFGDG 199
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +2
Query: 326 ATNFLKEYLKQHANSPKDVQPSGEG 400
A F+K+Y++ +P + G+G
Sbjct: 175 ALKFIKKYIQHFGGTPDSITLFGDG 199
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +2
Query: 326 ATNFLKEYLKQHANSPKDVQPSGEG 400
A F+K+Y++ +P + G+G
Sbjct: 175 ALKFIKKYIQHFGGTPDSITLFGDG 199
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +2
Query: 326 ATNFLKEYLKQHANSPKDVQPSGEG 400
A F+K+Y++ +P + G+G
Sbjct: 175 ALKFIKKYIQHFGGTPDSITLFGDG 199
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +2
Query: 326 ATNFLKEYLKQHANSPKDVQPSGEG 400
A F+K+Y++ +P + G+G
Sbjct: 175 ALKFIKKYIQHFGGTPDSITLFGDG 199
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 320 KHATNFLKEYLKQHANSP 373
K ATN L+ +L QH P
Sbjct: 187 KVATNILRAWLFQHLTHP 204
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 469 VWRNLRTR 492
VWRNLRT+
Sbjct: 122 VWRNLRTK 129
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/34 (23%), Positives = 15/34 (44%)
Frame = +2
Query: 266 IHGNVGKKPYNTFTLDIYKHATNFLKEYLKQHAN 367
+ + G KP+ D + L ++K H+N
Sbjct: 250 LRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSN 283
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/34 (23%), Positives = 15/34 (44%)
Frame = +2
Query: 266 IHGNVGKKPYNTFTLDIYKHATNFLKEYLKQHAN 367
+ + G KP+ D + L ++K H+N
Sbjct: 8 LRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSN 41
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 293 YNTFTLDIYKHATNFLK 343
Y T+ L+ Y H NF +
Sbjct: 346 YTTYFLNTYPHLFNFFE 362
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 20.6 bits (41), Expect = 9.6
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -3
Query: 296 YRASYQHFHVS*VQTMGHHMLPDTF*LIVCHIF 198
Y Y + H+S +Q + ++L + L H+F
Sbjct: 52 YERRYMNAHLSGIQLVVRNLLDISLYLNAYHVF 84
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,473
Number of Sequences: 336
Number of extensions: 3078
Number of successful extensions: 22
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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