Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30184
         (565 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   3.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   5.2  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   6.9  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   9.1  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 237 HVMTHGLHLGYMEMLVRSPITLS 305
           HV+  G  L + + L+  PITLS
Sbjct: 613 HVLDGGFTLPFYKQLLNKPITLS 635


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 174 CLEAFLYLENVTHYQLKRIRQHVMTHGLHLGYMEML 281
           C    L +E +T+Y  K    HVM    H  +  ++
Sbjct: 65  CKGPRLIIERITNYNFKSYAGHVMLGPFHQRFSSII 100


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 511 NTH*FNTWF*DFSILLISLEQVL 443
           N H +NTWF   +I+  S+ ++L
Sbjct: 551 NKHVWNTWFVLLTIIFCSVYRIL 573


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 8   GSISSPPQHS*THKKRTRHVLDGHHNG*LSKSSRDFP 118
           G+ ++ PQ+   H  RT  V    H G  S  + DFP
Sbjct: 109 GNYTTLPQYFKQHGYRTHSVGKVFHPGASSNFTDDFP 145


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,074
Number of Sequences: 2352
Number of extensions: 11789
Number of successful extensions: 62
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)