Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30184
         (565 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104483-1|AAI04484.1|  495|Homo sapiens SUV420H1 protein protein.     29   8.5  
BC103498-1|AAI03499.1|  885|Homo sapiens suppressor of variegati...    29   8.5  
BC099714-1|AAH99714.1|  885|Homo sapiens suppressor of variegati...    29   8.5  
BC098121-1|AAH98121.1|  471|Homo sapiens SUV420H1 protein protein.     29   8.5  

>BC104483-1|AAI04484.1|  495|Homo sapiens SUV420H1 protein protein.
          Length = 495

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 393 EKVRKAAKPLLSKETLESTCSRL 461
           +K++K AKPLLSK  L + C RL
Sbjct: 49  KKLKKPAKPLLSKIKLRNHCKRL 71


>BC103498-1|AAI03499.1|  885|Homo sapiens suppressor of variegation
           4-20 homolog 1, isoform 1 protein.
          Length = 885

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 393 EKVRKAAKPLLSKETLESTCSRL 461
           +K++K AKPLLSK  L + C RL
Sbjct: 439 KKLKKPAKPLLSKIKLRNHCKRL 461


>BC099714-1|AAH99714.1|  885|Homo sapiens suppressor of variegation
           4-20 homolog 1 (Drosophila) protein.
          Length = 885

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 393 EKVRKAAKPLLSKETLESTCSRL 461
           +K++K AKPLLSK  L + C RL
Sbjct: 439 KKLKKPAKPLLSKIKLRNHCKRL 461


>BC098121-1|AAH98121.1|  471|Homo sapiens SUV420H1 protein protein.
          Length = 471

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 393 EKVRKAAKPLLSKETLESTCSRL 461
           +K++K AKPLLSK  L + C RL
Sbjct: 25  KKLKKPAKPLLSKIKLRNHCKRL 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,612,863
Number of Sequences: 237096
Number of extensions: 1778333
Number of successful extensions: 3142
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3135
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)