Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30183
(547 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64; Eukary... 130 2e-29
UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|R... 128 6e-29
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 103 4e-21
UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1; ... 99 6e-20
UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1; ... 87 3e-16
UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1; Encepha... 84 2e-15
UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=... 82 9e-15
UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lambl... 80 4e-14
UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089, ... 77 2e-13
UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiell... 71 2e-11
UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4; Archaea... 70 4e-11
UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal ... 58 1e-07
UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10; Thermo... 57 2e-07
UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2; Thermop... 54 3e-06
UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microsci... 46 4e-04
UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1; Caminiba... 46 8e-04
UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19; Bacteri... 44 0.002
UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2; Proteobacter... 42 0.007
UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidat... 42 0.009
UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1; ... 39 0.066
UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101; Bacter... 39 0.066
UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28; Bacteri... 38 0.11
UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8; Bacteria... 38 0.11
UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial... 37 0.26
UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3; Chlamydi... 37 0.26
UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellula... 36 0.81
UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22; Bacteri... 36 0.81
UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1; Planctom... 35 1.1
UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5; Firmicut... 35 1.1
UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n... 35 1.1
UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidat... 35 1.4
UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7; Eurotiom... 33 3.3
UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellul... 33 3.3
UniRef50_Q9Z753 Cluster: Putative uncharacterized protein; n=4; ... 33 4.3
UniRef50_A2Y5Y5 Cluster: Putative uncharacterized protein; n=3; ... 32 7.5
UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66; Bacteri... 32 7.5
UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella a... 32 9.9
>UniRef50_P62249 Cluster: 40S ribosomal protein S16; n=64;
Eukaryota|Rep: 40S ribosomal protein S16 - Homo sapiens
(Human)
Length = 146
Score = 130 bits (315), Expect = 2e-29
Identities = 59/81 (72%), Positives = 71/81 (87%)
Frame = +1
Query: 13 PIQAVQVXGRXKTATAVAYCKRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFSM 192
P+Q+VQV GR KTATAVA+CKRG+G+++VNGRPL + EP LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 193 XDIRVTVKGGGHVAQVYAIRQ 255
DIRV VKGGGHVAQ+YAIRQ
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQ 86
Score = 120 bits (288), Expect = 3e-26
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ISKAL+A+YQKYVDEASKKEIKDIL+QYDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 87 SISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>UniRef50_Q4PM67 Cluster: Ribosomal protein S16; n=5; Eukaryota|Rep:
Ribosomal protein S16 - Ixodes scapularis (Black-legged
tick) (Deer tick)
Length = 148
Score = 128 bits (310), Expect = 6e-29
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +1
Query: 1 ARREPIQAVQVXGRXKTATAVAYCKRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKE 180
A +E IQ+VQV GR KTATAVAYCKRG+G+L+VNGRPL EP L+YKL EPILLLGKE
Sbjct: 4 AAKEAIQSVQVLGRKKTATAVAYCKRGNGLLKVNGRPLENIEPLTLRYKLLEPILLLGKE 63
Query: 181 KFSMXDIRVTVKGGGHVAQVYAIRQ 255
+F+ DIR+ VKGGG+VAQ+YAIRQ
Sbjct: 64 RFAGVDIRIRVKGGGNVAQIYAIRQ 88
Score = 120 bits (289), Expect = 2e-26
Identities = 54/60 (90%), Positives = 58/60 (96%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AISKAL+A+YQKYVDE SKKEIKD L+QYDR+LLVADPRRCEPKKFGGPGARARYQKSYR
Sbjct: 89 AISKALVAYYQKYVDEQSKKEIKDTLIQYDRTLLVADPRRCEPKKFGGPGARARYQKSYR 148
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 103 bits (246), Expect = 4e-21
Identities = 46/80 (57%), Positives = 63/80 (78%)
Frame = +1
Query: 16 IQAVQVXGRXKTATAVAYCKRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFSMX 195
+ +VQ G+ K+ATAVA+ K G G+++VNG P+ L EP +L++K+ EP+LL+G +KFS
Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNI 63
Query: 196 DIRVTVKGGGHVAQVYAIRQ 255
DIRV V GGGHV+QVYAIRQ
Sbjct: 64 DIRVRVTGGGHVSQVYAIRQ 83
Score = 90.6 bits (215), Expect = 2e-17
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AI+K L+A++QKYVDE SK E+K YDR+LL+AD RR EPKKFGG GAR+R+QKSYR
Sbjct: 84 AIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKSYR 143
>UniRef50_Q5AQG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 155
Score = 99.1 bits (236), Expect = 6e-20
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AI+K+L+A+YQKYVDE SK ++K VQYDR+LLVAD RR EPKKFGG GARARYQKSYR
Sbjct: 96 AIAKSLVAYYQKYVDEHSKNQLKQAFVQYDRTLLVADNRRAEPKKFGGRGARARYQKSYR 155
Score = 52.0 bits (119), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 154 EPILLLGKEKFSMXDIRVTVKGGGHVAQVYAIRQ 255
EP+L++G +KF+ DIRV V GGGH +QVYAIRQ
Sbjct: 62 EPVLIVGADKFAGVDIRVRVTGGGHTSQVYAIRQ 95
>UniRef50_Q4PHH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 199
Score = 86.6 bits (205), Expect = 3e-16
Identities = 41/73 (56%), Positives = 52/73 (71%)
Frame = +3
Query: 216 GXWSCSTSLRYQTAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFG 395
G + S + AI+K+L+A+Y KY D AS E++ + V YDR+LL+AD RR EPKKFG
Sbjct: 127 GGGATSQIYAIRQAIAKSLVAYYAKYYDAASALELRQLFVAYDRTLLIADTRRSEPKKFG 186
Query: 396 GPGARARYQKSYR 434
G GARAR QKSYR
Sbjct: 187 GHGARARRQKSYR 199
Score = 71.3 bits (167), Expect = 1e-11
Identities = 28/56 (50%), Positives = 46/56 (82%)
Frame = +1
Query: 22 AVQVXGRXKTATAVAYCKRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFS 189
+V G+ KTATAVA+CK G G++R+NG+P+ L +P +L++K+ EP+L++G++KFS
Sbjct: 5 SVSCFGKKKTATAVAHCKEGKGLIRLNGQPISLVQPEILRWKVFEPVLVVGEDKFS 60
Score = 32.7 bits (71), Expect = 5.7
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 187 SMXDIRVTVKGGGHVAQVYAIRQ 255
S DIR+ V GGG +Q+YAIRQ
Sbjct: 117 STVDIRLRVSGGGATSQIYAIRQ 139
>UniRef50_Q8SSC2 Cluster: 40S RIBOSOMAL PROTEIN S16; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S16
- Encephalitozoon cuniculi
Length = 145
Score = 83.8 bits (198), Expect = 2e-15
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
A +KA++AFY Y DE K+EI+ L+ +DR LVAD R+ EPKKFGGPGARARYQKSYR
Sbjct: 86 AFAKAILAFYGTYFDEWKKQEIQKRLLDFDRFSLVADSRKREPKKFGGPGARARYQKSYR 145
Score = 46.8 bits (106), Expect = 3e-04
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 16 IQAVQVXGRXKTATAVAYCKR-GHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFSM 192
+++V G+ K A A C + G +R+N P L L+ KL+E I ++ +
Sbjct: 5 VKSVTTQGKKKRAVATCVCTQTGEFSIRINKVPFKLITNTLMIAKLKEIICIVEQANIKD 64
Query: 193 XDIRVTVKGGGHVAQVYAIRQLFRR 267
+T K GG V++VYA+R F +
Sbjct: 65 LSFDITCKIGGDVSRVYAVRMAFAK 89
>UniRef50_Q4Q9A5 Cluster: 40S ribosomal protein S16, putative; n=7;
Trypanosomatidae|Rep: 40S ribosomal protein S16,
putative - Leishmania major
Length = 149
Score = 81.8 bits (193), Expect = 9e-15
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +3
Query: 177 GKILYGRHQSDS--QGXWSCSTSLRYQTAISKALIAFYQKYVDEASKKEIKDILVQYDRS 350
G Y R + D G S + + AI+K LIAF+QKY +E K +KD + YD+
Sbjct: 62 GSKYYSRLRIDVAVHGGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKF 121
Query: 351 LLVADPRRCEPKKFGGPGARARYQKSYR 434
LL+ADPRRCEPKK+G AR R+ KSYR
Sbjct: 122 LLIADPRRCEPKKWGRHSARTRFTKSYR 149
Score = 59.7 bits (138), Expect = 4e-08
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 16 IQAVQVXGRXKTATAVA-YCKRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFSM 192
++ VQ G+ KTA AVA K ++VNG PL P L+ K+ E I ++G + +S
Sbjct: 9 LKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVVGSKYYSR 68
Query: 193 XDIRVTVKGGGHVAQVYAIRQ 255
I V V GGG V+Q YA RQ
Sbjct: 69 LRIDVAVHGGGQVSQAYAARQ 89
>UniRef50_Q7R487 Cluster: GLP_480_84573_84097; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_84573_84097 - Giardia lamblia
ATCC 50803
Length = 158
Score = 79.8 bits (188), Expect = 4e-14
Identities = 36/81 (44%), Positives = 51/81 (62%)
Frame = +1
Query: 25 VQVXGRXKTATAVAYCKRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFSMXDIR 204
V G+ K + AVA+ K G G + VN PL L P +L+ K+ EPI++LG+ F D+
Sbjct: 25 VHTLGKKKNSVAVAFVKAGKGDILVNNVPLALVRPEILRTKVSEPIMILGESLFKGLDMN 84
Query: 205 VTVKGGGHVAQVYAIRQLFRR 267
+ V GGGHV+Q+YA+RQ R
Sbjct: 85 IKVAGGGHVSQIYAVRQAISR 105
Score = 73.3 bits (172), Expect = 3e-12
Identities = 36/60 (60%), Positives = 46/60 (76%)
Frame = +3
Query: 255 AISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
AIS+ ++A + DEA++ E++ LV YDR L+V+DPRRCE KKFGG GARAR QKSYR
Sbjct: 102 AISRGVLASVK---DEAARSELRAKLVSYDRQLVVSDPRRCEAKKFGGRGARARRQKSYR 158
>UniRef50_Q6ZWL6 Cluster: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16; n=2;
Homo sapiens|Rep: CDNA FLJ40618 fis, clone THYMU2013089,
moderately similar to 40S RIBOSOMAL PROTEIN S16 - Homo
sapiens (Human)
Length = 178
Score = 77.4 bits (182), Expect = 2e-13
Identities = 49/145 (33%), Positives = 64/145 (44%)
Frame = +1
Query: 16 IQAVQVXGRXKTATAVAYCKRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFSMX 195
+Q+VQ+ + A AV C+ G G +R+N PL + LQYKL E LLL KE+ +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 196 DIRVTVKGGGHVAQVYAIRQLFRRL*SPSTRNM*TKPQRRKSKTS*FNTIGVCWWLTXXX 375
DI V VKG GHV Q+YA+ Q + P + T CWW T
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEASEEIKDT----LTRPCWWFTPVA 133
Query: 376 XXXXXXXXXXXXXDTRNLTVKPSTK 450
TRN + KP K
Sbjct: 134 MNPRNLQALVPVLTTRNHSSKPIKK 158
>UniRef50_Q3LWA6 Cluster: Ribosomal protein S16; n=1; Bigelowiella
natans|Rep: Ribosomal protein S16 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +3
Query: 210 SQGXWSCSTSLRYQTAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK 389
S+G S + +ISK L+ +Y KY+ + +K + YD+ LL++D R EPKK
Sbjct: 65 SKGGGKVSQIYAIRQSISKCLVFYYYKYISASKSNLLKIKYLTYDKKLLISDVSRIEPKK 124
Query: 390 FGGPGARARYQKSYR 434
+GG GARAR+QKSYR
Sbjct: 125 YGGLGARARFQKSYR 139
Score = 65.7 bits (153), Expect = 7e-10
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +1
Query: 25 VQVXGRXKTATAVAYCKRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFSMXDIR 204
+Q G+ K A A+ K+G G +++NG P+ L P ++ K+ EP +LG + +
Sbjct: 3 IQCFGKKKNAIAITTAKKGSGKIKINGVPINLVHPLDIKNKILEPFFILGSNERLNLNFD 62
Query: 205 VTVKGGGHVAQVYAIRQ 255
+ KGGG V+Q+YAIRQ
Sbjct: 63 IFSKGGGKVSQIYAIRQ 79
>UniRef50_O59299 Cluster: 30S ribosomal protein S9P; n=4;
Archaea|Rep: 30S ribosomal protein S9P - Pyrococcus
horikoshii
Length = 135
Score = 69.7 bits (163), Expect = 4e-11
Identities = 30/79 (37%), Positives = 51/79 (64%)
Frame = +1
Query: 16 IQAVQVXGRXKTATAVAYCKRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFSMX 195
++ +Q G+ KTA A A + G G +R+NG+P+ + EP + ++ + EP++L G+E ++
Sbjct: 1 MRIIQTTGKRKTAIARAVIREGRGRVRINGKPVEIIEPEIARFTILEPLILAGEEIWNSV 60
Query: 196 DIRVTVKGGGHVAQVYAIR 252
DI V V+GGG + Q A R
Sbjct: 61 DIDVKVQGGGFMGQAEAAR 79
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 267 ALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKK--FGGPGARARYQKSYR 434
A IA + V+ +K+ ++YDR++LV DPRR EP K G RA+ QKSYR
Sbjct: 78 ARIAIARALVEWTGDMNLKEKFIKYDRTMLVGDPRRTEPHKPNRSTKGPRAKRQKSYR 135
>UniRef50_UPI0000DA28A7 Cluster: PREDICTED: similar to ribosomal
protein S16; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S16 - Rattus norvegicus
Length = 102
Score = 58.0 bits (134), Expect = 1e-07
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 13 PIQAVQVXGRXKTATAVAYCKRGHGMLRVNG-RPLXLXEPXLLQYKLQEPILLLGKEKFS 189
P+Q+ QV G K A +A +G +++V L + EP QY+L +PIL LGKE+F+
Sbjct: 25 PLQSKQVFGCKKKA--IAMHAKGKWLIKVTDVHLLEMTEPVKQQYQLLDPILPLGKERFA 82
Query: 190 MXDIRVTVKGGGHVAQVYAI 249
I V V G G VAQ+YAI
Sbjct: 83 RVGIWVRVNGVGRVAQIYAI 102
>UniRef50_Q9YB48 Cluster: 30S ribosomal protein S9P; n=10;
Thermoprotei|Rep: 30S ribosomal protein S9P - Aeropyrum
pernix
Length = 151
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/77 (37%), Positives = 44/77 (57%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFSMXDIRVTVK 216
G+ K A A A + G G + +NG PL + + + K+ EP+L+ G+ S+ DIRV V+
Sbjct: 11 GKRKRAIARAVIRPGRGRVWINGVPLEIYPIEMARIKMMEPLLIAGEGVRSLVDIRVRVE 70
Query: 217 GGGHVAQVYAIRQLFRR 267
GGG + Q A+R R
Sbjct: 71 GGGVMGQADAVRMAIAR 87
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/49 (42%), Positives = 36/49 (73%)
Frame = +3
Query: 288 KYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGARARYQKSYR 434
+ +D+ S+ +++ +++DR++LV DPRR EP+K+ AR R+QKSYR
Sbjct: 104 RMMDKISR-DLRTAFLEHDRTMLVGDPRRTEPEKYMRYSARRRWQKSYR 151
>UniRef50_A0RXP4 Cluster: 30S ribosomal protein S9P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S9P -
Cenarchaeum symbiosum
Length = 149
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Frame = +3
Query: 252 TAISKALIAFYQKY-------VDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGGPGAR 410
T IS+ALI + + + + ++++++ + +D+ L+ D RR EPKKFGGPGAR
Sbjct: 82 TGISRALIGWTKSRREPRNHPLTKTAREDLRKRIGDFDKYLISGDARRKEPKKFGGPGAR 141
Query: 411 ARYQKSYR 434
R QKSYR
Sbjct: 142 RRKQKSYR 149
>UniRef50_A1ZN19 Cluster: 30S ribosomal protein S9; n=1; Microscilla
marina ATCC 23134|Rep: 30S ribosomal protein S9 -
Microscilla marina ATCC 23134
Length = 172
Score = 46.4 bits (105), Expect = 4e-04
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +1
Query: 16 IQAVQVXGRXKTATAVAYCKRGHGMLRVNGRPLXLXEPX-LLQYKLQEPILLL-GKEKFS 189
++ + GR KT+ A Y + G G + VN R P +LQ +++PI+ + EKF
Sbjct: 7 VKIINTIGRRKTSIARVYLQEGSGQITVNKRDFAEYFPTDVLQTIVKQPIVAVDANEKF- 65
Query: 190 MXDIRVTVKGGGHVAQVYAIRQLFRR 267
DIR V GGG Q A+R R
Sbjct: 66 --DIRANVTGGGVAGQAEALRHAIAR 89
>UniRef50_A6DDR0 Cluster: 30S ribosomal protein S9; n=1;
Caminibacter mediatlanticus TB-2|Rep: 30S ribosomal
protein S9 - Caminibacter mediatlanticus TB-2
Length = 144
Score = 45.6 bits (103), Expect = 8e-04
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 25 VQVXGRXKTATAVAYCKRGHGMLRVNGRPL--XLXEPXLLQYKLQEPILLLGKEKFSMXD 198
+ G+ K A A + K G G + VNG+PL L L+ +++ P++L+ +E D
Sbjct: 7 IYATGKRKEAVAKVWLKNGSGNITVNGKPLDEFLGGREALKLRVRWPLMLVKQE--GNFD 64
Query: 199 IRVTVKGGGHVAQVYAIR 252
I V V GGG AQ AI+
Sbjct: 65 IEVKVLGGGFAAQADAIK 82
>UniRef50_Q6F0X3 Cluster: 30S ribosomal protein S9; n=19;
Bacteria|Rep: 30S ribosomal protein S9 - Mesoplasma
florum (Acholeplasma florum)
Length = 131
Score = 44.4 bits (100), Expect = 0.002
Identities = 31/74 (41%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRPLX--LXEPXLLQYKLQEPILLLGKEKFSMXDIRVT 210
GR KT+ A G G + VNG P P L+Q L++P++ G EK DI VT
Sbjct: 11 GRRKTSVAQVILTPGKGNIIVNGVPALEFFPYPTLVQ-DLEQPLVATGTEKD--FDITVT 67
Query: 211 VKGGGHVAQVYAIR 252
VKGGG Q A R
Sbjct: 68 VKGGGFTGQAGATR 81
>UniRef50_A5WDK8 Cluster: Ribosomal protein S9; n=2;
Proteobacteria|Rep: Ribosomal protein S9 - Psychrobacter
sp. PRwf-1
Length = 128
Score = 42.3 bits (95), Expect = 0.007
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRPL-XLXEPXLLQYKLQEPILLLGKEKFSMXDIRVTV 213
GR KT+TA + +G G + VNG+PL + +++P+ LL + DI TV
Sbjct: 8 GRRKTSTARVFLSKGTGNIVVNGKPLDEYFGRETSRMVVRQPLELL--DSAETYDIYATV 65
Query: 214 KGGGHVAQVYAIR 252
KGGG Q AIR
Sbjct: 66 KGGGINGQAGAIR 78
>UniRef50_Q1NYV6 Cluster: 30S ribosomal protein S9; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: 30S
ribosomal protein S9 - Candidatus Sulcia muelleri str.
Hc (Homalodisca coagulata)
Length = 132
Score = 41.9 bits (94), Expect = 0.009
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 25 VQVXGRXKTATAVAYCKRGHGMLRVNGRPL-XLXEPXLLQYKLQEPILL-LGKEKFSMXD 198
+ GR KTA A Y K G G+++VN P LL K+ +P+LL + KF D
Sbjct: 8 IHTIGRRKTAVARMYMKIGSGLIKVNNIPYKNYFNNNLLFNKISKPLLLTYNQNKF---D 64
Query: 199 IRVTVKGGGHVAQVYAI 249
+ V GGG +Q AI
Sbjct: 65 FYIKVSGGGINSQAEAI 81
>UniRef50_A3CEI4 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 61
Score = 39.1 bits (87), Expect = 0.066
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 7 REPIQAVQVXGRXKTATAVAYCKRGHGMLRV 99
R P VQ GR KTA AV+YCK G G+++V
Sbjct: 7 RPPPGTVQCFGRKKTAVAVSYCKPGRGLIKV 37
>UniRef50_Q83AX9 Cluster: 30S ribosomal protein S9; n=101;
Bacteria|Rep: 30S ribosomal protein S9 - Coxiella
burnetii
Length = 139
Score = 39.1 bits (87), Expect = 0.066
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRPLX-LXEPXLLQYKLQEPILLLGKEKFSMXDIRVTV 213
GR KT++A + + G G + +NG PL + +++P++ L + S D+ TV
Sbjct: 13 GRRKTSSARVFLRSGTGQIIINGLPLDEYFGRETARMVVRQPLVKLDVQ--SRFDVYATV 70
Query: 214 KGGGHVAQVYAIR 252
+GGG Q AIR
Sbjct: 71 QGGGDSGQAGAIR 83
>UniRef50_Q5R0K5 Cluster: 30S ribosomal protein S9; n=28;
Bacteria|Rep: 30S ribosomal protein S9 - Idiomarina
loihiensis
Length = 130
Score = 38.3 bits (85), Expect = 0.11
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRPLX-LXEPXLLQYKLQEPILLLGK-EKFSMXDIRVT 210
GR K +TA + + G G +++N R L Q +++P+ L+ EKF D+ +T
Sbjct: 10 GRRKNSTARVFLRPGSGNIKINNRELNEYFGRETAQMVVRQPLELVEMTEKF---DMYIT 66
Query: 211 VKGGGHVAQVYAIR 252
V GGG Q AIR
Sbjct: 67 VSGGGTTGQAGAIR 80
>UniRef50_Q8F0T3 Cluster: 30S ribosomal protein S9; n=8;
Bacteria|Rep: 30S ribosomal protein S9 - Leptospira
interrogans
Length = 139
Score = 38.3 bits (85), Expect = 0.11
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +1
Query: 13 PIQAVQVXGRXKTATAVAYCKRGHGMLRVNGRPLX--LXEPXLLQYKLQEPILLLGKEKF 186
P + + GR KT+ A A K G G + VN + + L + + P+ LL +
Sbjct: 10 PAKEIWAVGRRKTSVARAKIKEGSGKITVNHKDIKDYLQNRKAIIEEAIRPLSLLNVQ-- 67
Query: 187 SMXDIRVTVKGGGHVAQVYAIRQLFRR 267
D+ + V GGG QV AIR R
Sbjct: 68 DKYDLNLNVTGGGTTGQVGAIRHALAR 94
>UniRef50_P82933 Cluster: 28S ribosomal protein S9, mitochondrial
precursor; n=29; Euteleostomi|Rep: 28S ribosomal protein
S9, mitochondrial precursor - Homo sapiens (Human)
Length = 396
Score = 37.1 bits (82), Expect = 0.26
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRXKTATAVAYC-KRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFSMXDIRVTV 213
G+ KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 214 KGGGHVAQVYAIR 252
GGG AQ AIR
Sbjct: 333 SGGGRSAQAGAIR 345
>UniRef50_Q9PKR2 Cluster: 30S ribosomal protein S9; n=3;
Chlamydia|Rep: 30S ribosomal protein S9 - Chlamydia
muridarum
Length = 133
Score = 37.1 bits (82), Expect = 0.26
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 REPIQAVQVXGRXKTATAVAYCKRGHGMLRVNGRPLXLXEPXLLQ-YKLQEPILLLGKEK 183
+ IQ GR K A + + G+G + VNG+ L P +Q + P+ +LG
Sbjct: 3 KNTIQESVATGRRKQAVSSVRLRSGNGKIDVNGKTLEQYFPLEVQRATILAPLKMLG--D 60
Query: 184 FSMXDIRVTVKGGGHVAQVYAIR 252
+ D+ + V GGG QV A R
Sbjct: 61 VNSFDLIIRVSGGGVQGQVIATR 83
>UniRef50_Q11J66 Cluster: 30S ribosomal protein S9; n=11; cellular
organisms|Rep: 30S ribosomal protein S9 - Mesorhizobium
sp. (strain BNC1)
Length = 160
Score = 35.5 bits (78), Expect = 0.81
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRPLX-LXEPXLLQYKLQEPILLLGKEKFSMXDIRVTV 213
G+ K A A + K G G + VN + +LQ LQ+PI+ + DI TV
Sbjct: 40 GKRKNAIARVWVKPGSGKILVNDKEFTQYFARPVLQMILQQPIVATNRN--GQYDIVATV 97
Query: 214 KGGGHVAQVYAIR 252
GGG Q A+R
Sbjct: 98 VGGGLSGQAGAVR 110
>UniRef50_Q9KGD4 Cluster: 30S ribosomal protein S9; n=22;
Bacteria|Rep: 30S ribosomal protein S9 - Bacillus
halodurans
Length = 130
Score = 35.5 bits (78), Expect = 0.81
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRPLX-LXEPXLLQYKLQEPILLLGKEKFSMXDIRVTV 213
GR K + A G G + +NGR L L+ +++P++ G E D+RV V
Sbjct: 10 GRRKHSVARVRLVPGDGNIVINGRSLDEYFGLETLKLIVKQPLVETGTE--GQYDVRVNV 67
Query: 214 KGGGHVAQVYAIR 252
GGG Q AIR
Sbjct: 68 DGGGFTGQAGAIR 80
>UniRef50_A6C0N9 Cluster: 30S ribosomal protein S9; n=1;
Planctomyces maris DSM 8797|Rep: 30S ribosomal protein
S9 - Planctomyces maris DSM 8797
Length = 201
Score = 35.1 bits (77), Expect = 1.1
Identities = 26/71 (36%), Positives = 31/71 (43%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFSMXDIRVTVK 216
GR KTA A K G G L +NG+ L ++ E L E F D+ V V
Sbjct: 81 GRRKTAVARVRIKAGSGSLTINGQSLNDYLRVERDRQMVE-APLKATETFGKVDVWVRVT 139
Query: 217 GGGHVAQVYAI 249
GGG Q AI
Sbjct: 140 GGGTTGQTGAI 150
>UniRef50_P47656 Cluster: 30S ribosomal protein S9; n=5;
Firmicutes|Rep: 30S ribosomal protein S9 - Mycoplasma
genitalium
Length = 132
Score = 35.1 bits (77), Expect = 1.1
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 37 GRXKTATAVAYC--KRGHGMLRVNGR-PLXLXEPXLLQYKLQEPILLLG-KEKFSMXDIR 204
GR K++TA Y + G + +N R P L+ +++P+ L K+ F DI
Sbjct: 10 GRRKSSTAKVYLYQSKDKGKITINHRNPSDYFPNKLVIQDMEQPLELTKLKDNF---DIN 66
Query: 205 VTVKGGGHVAQVYAIR 252
V VKGGG Q AIR
Sbjct: 67 VVVKGGGFTGQAGAIR 82
>UniRef50_Q3ZJ40 Cluster: Chloroplast 30S ribosomal protein S9; n=2;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S9 -
Pseudendoclonium akinetum (Green alga)
Length = 141
Score = 35.1 bits (77), Expect = 1.1
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRP--LXLXEPXLLQYKLQEPILLLG-KEKFSMXDIRV 207
GR KT+ A G+G +NG + + L + +QEP+ L K +F++ +
Sbjct: 20 GRRKTSIATVQLFPGNGEFTINGISGIEYMQQKEELIFAIQEPLHFLKLKNEFNLI---I 76
Query: 208 TVKGGGHVAQVYAIR 252
VKGGG V QV AI+
Sbjct: 77 KVKGGGLVGQVNAIK 91
>UniRef50_Q1UZ81 Cluster: 30S ribosomal protein S9; n=2; Candidatus
Pelagibacter ubique|Rep: 30S ribosomal protein S9 -
Candidatus Pelagibacter ubique HTCC1002
Length = 149
Score = 34.7 bits (76), Expect = 1.4
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRPL-XLXEPXLLQYKLQEPILLLGKEKFSMXDIRVTV 213
GR K + A + K+G G + VNGR + + ++ P ++ + + D+R +V
Sbjct: 29 GRRKKSIAKIWVKKGTGKIYVNGRTMDEYFTSGSHKMQITRPFEIINQA--TDYDVRCSV 86
Query: 214 KGGGHVAQVYAI 249
GGGH Q A+
Sbjct: 87 AGGGHTGQAGAM 98
>UniRef50_A1CMA0 Cluster: 37S ribosomal protein S9; n=7;
Eurotiomycetidae|Rep: 37S ribosomal protein S9 -
Aspergillus clavatus
Length = 315
Score = 33.5 bits (73), Expect = 3.3
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRPLXLXEPXLLQYKLQEPILLLGKEKFSMXDIRVTVK 216
G+ KT++AV + G G + VNG+ L P L + L + ++ TV+
Sbjct: 195 GKRKTSSAVVHLVEGEGEVMVNGKTLGEAFPR-LHDRESATWALRCTSRLDKYNVWATVR 253
Query: 217 GGGHVAQVYAI 249
GGG Q A+
Sbjct: 254 GGGVTGQAEAV 264
>UniRef50_Q982W9 Cluster: 30S ribosomal protein S9; n=190; cellular
organisms|Rep: 30S ribosomal protein S9 - Rhizobium loti
(Mesorhizobium loti)
Length = 160
Score = 33.5 bits (73), Expect = 3.3
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRPLXLX-EPXLLQYKLQEPILLLGKEKFSMXDIRVTV 213
G+ K A A + K G G + VN + +LQ L +PI+ + DI TV
Sbjct: 40 GKRKNAIARVWVKPGSGKIVVNDKEFATYFARPVLQMILNQPII--ASNRSGQYDIVATV 97
Query: 214 KGGGHVAQVYAIR 252
GGG Q A+R
Sbjct: 98 VGGGLSGQAGAVR 110
>UniRef50_Q9Z753 Cluster: Putative uncharacterized protein; n=4;
Chlamydophila|Rep: Putative uncharacterized protein -
Chlamydia pneumoniae (Chlamydophila pneumoniae)
Length = 389
Score = 33.1 bits (72), Expect = 4.3
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +3
Query: 144 QTSGTYPFARQGKILYGRHQSD-SQGXWSCSTSLRYQTAISKALIAFYQKY-VDEASKKE 317
QTSGT FA +++ R+ ++ SQ +++++ + A++ + + +A KK+
Sbjct: 194 QTSGTANFAYGYEMILSRYNNEVSQCRLDIASTVKAKAALANMSASVKANVSLTDAQKKQ 253
Query: 318 IKDILVQYDRSL 353
I+DI+ Y +SL
Sbjct: 254 IEDIIASYTKSL 265
>UniRef50_A2Y5Y5 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 524
Score = 32.3 bits (70), Expect = 7.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 369 RRCEPKKFGGPGARARYQKSYR*AFNETIGWYRRGGLLSLRY 494
R C P+ G R R ++ A+N + W+ R GLL L++
Sbjct: 46 RSCFPRPISTLGRRRRIRRDEGKAYNREMSWFSRFGLLRLKH 87
>UniRef50_Q98Q72 Cluster: 30S ribosomal protein S9; n=66;
Bacteria|Rep: 30S ribosomal protein S9 - Mycoplasma
pulmonis
Length = 136
Score = 32.3 bits (70), Expect = 7.5
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +1
Query: 37 GRXKTATAVAYCKRGHGMLRVNGRPLX--LXEPXLLQYKLQEPILLLGKEKFSMXDIRVT 210
GR K++ A +G G +N R L ++ LQ L F DIRVT
Sbjct: 16 GRRKSSVARVILLKGSGKFTINKREAKEYLKSDIYIKDALQPFDLTQTNNTF---DIRVT 72
Query: 211 VKGGGHVAQVYAIR 252
V+GGG Q AIR
Sbjct: 73 VRGGGLAGQAGAIR 86
>UniRef50_Q08PN8 Cluster: Polyketide synthase; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Polyketide synthase -
Stigmatella aurantiaca DW4/3-1
Length = 535
Score = 31.9 bits (69), Expect = 9.9
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 345 RSLLVADPRRCEPKKFGGPGARARY 419
RSLL P EP+ + GPGAR RY
Sbjct: 229 RSLLTEAPAPAEPEPWTGPGARVRY 253
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,803,558
Number of Sequences: 1657284
Number of extensions: 8816580
Number of successful extensions: 21217
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 20759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21209
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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