Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30173
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    27   0.17 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   3.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.7  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 11/47 (23%), Positives = 24/47 (51%)
 Frame = +2

Query: 56  KSAKPYKRYDPLILKTAIEAYEIGNRSLVEIAKQFNISKSVLHRHVT 196
           +  KPY   DP +    ++A ++    L+E+ K   +  +  HR+++
Sbjct: 131 RQEKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYIS 177


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 269 IPTLKNINIYYVIFFCVHLEISLFLLHVCAKQT 171
           I   K    YY  FF VHL   + +++    QT
Sbjct: 107 IKKTKRYCYYYYAFFGVHLAYGVVIIYSICVQT 139


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 414 YCQFIVDCTH*GDICHVLLSVFQ 482
           YCQF+ +C H   +  ++LS +Q
Sbjct: 141 YCQFLYNCFH-STLLLMILSRYQ 162


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +2

Query: 299 IIMGLLXRVRIXIKRFTDNLPGVNYIET*SVIYLYXXXLLSI 424
           I +GL+    +  +   DN+   N I   S+I+L+   +L +
Sbjct: 148 ISVGLIRDTAVLYRLLADNVANFNKIFGWSLIFLFGRIVLQL 189


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 172 VCFAQTCNKNNEISRW 219
           +C  +  + NNE+ RW
Sbjct: 25  ICVPKITSTNNEVPRW 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,133
Number of Sequences: 336
Number of extensions: 2506
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)