Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30170
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   2.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   3.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   3.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.1  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 226 SNCSGHGVCNPRVTVTVKPGSRRH 297
           S C    VC PRV+  +K   R H
Sbjct: 148 SACGLFSVCYPRVSAQMKADLRSH 171


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 519 LPXRALTQTDSRNAPASLRNLLSFKRNKN 605
           +P  + T+ ++ N P++  N  +F  N N
Sbjct: 118 IPDISSTRGNNNNTPSATNNNTNFNNNSN 146


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 440 VHEEHDEQNRRYDAEEDHVHRDHEVPL 360
           +H++H +QN  ++     V+R H + L
Sbjct: 313 MHQQHHQQNMSHEELSAMVNRCHPLSL 339


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 519 LPXRALTQTDSRNAPASLRNLLSFKRNKN 605
           +P  + T+ ++ N P++  N  +F  N N
Sbjct: 66  IPDISSTRGNNNNTPSATNNNTNFNNNSN 94


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 519 LPXRALTQTDSRNAPASLRNLLSFKRNKN 605
           +P  + T+ ++ N P++  N  +F  N N
Sbjct: 249 IPDISSTRGNNNNTPSATNNNTNFNNNSN 277


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +1

Query: 256 PRVTVTVKPGSRRHCVPCPALVAPWTPVRP 345
           P + + V   + + C P   L+  W P+ P
Sbjct: 480 PVMRICVSAWNPKDCDPLITLIETWMPLLP 509


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 396 LGIIPSVLLVMFLVYYSRH 452
           +G+I + ++V+F +YY  H
Sbjct: 252 IGLIKNCVIVIFELYYLSH 270


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 283 GSRRHCVPCPA 315
           G R+H +PCP+
Sbjct: 939 GERKHHMPCPS 949


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/39 (20%), Positives = 22/39 (56%)
 Frame = -2

Query: 476 FLPPVQHVVSRVVHEEHDEQNRRYDAEEDHVHRDHEVPL 360
           +LP ++++ S+ +HE      +   A +  + +D+ +P+
Sbjct: 445 YLPVLKNMPSQYIHEPWTAPEQVQRAAKCIIGKDYSLPM 483


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +3

Query: 387 VIFLGIIPSVLLVMFLVYYSRHNVLYWWKKPRKSYVD 497
           ++F+  +  VL + + VYY R     +W +   S+++
Sbjct: 103 LLFVINVLYVLTLCYAVYYWRQQYEDFWHRYTLSFIE 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,405
Number of Sequences: 336
Number of extensions: 2706
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)