Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30170
(606 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-15|CAJ14166.1| 271|Anopheles gambiae predicted protein... 27 0.36
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 25 1.9
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 3.3
AY604021-1|AAT38515.1| 118|Anopheles gambiae LZ9988P protein. 24 3.3
AY146735-1|AAO12095.1| 149|Anopheles gambiae odorant-binding pr... 24 3.3
U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein. 23 5.8
AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein. 23 5.8
AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein. 23 5.8
AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein. 23 5.8
AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein. 23 5.8
AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding pr... 23 5.8
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 23 5.8
AY146756-1|AAO12071.1| 282|Anopheles gambiae odorant-binding pr... 23 7.7
>CR954257-15|CAJ14166.1| 271|Anopheles gambiae predicted protein
protein.
Length = 271
Score = 27.5 bits (58), Expect = 0.36
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 348 DPTIQRNFMVAMYVIFLGIIPSVLLVMFLVYYSRHNVLYWWKK 476
D + RN +A V+ L ++P L+ + V Y +LYWW +
Sbjct: 220 DGSPARNDAMANKVVLLLVLP--LIAVLGVAYGAICILYWWNR 260
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 25.0 bits (52), Expect = 1.9
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Frame = +1
Query: 232 CSGHGVC---NPRVTVTVKPG--SRRHCVPCP 312
CSGHG C R TVT + G + R+C CP
Sbjct: 645 CSGHGTCECGTCRCTVT-EDGRYTGRYCEKCP 675
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 24.2 bits (50), Expect = 3.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -3
Query: 352 GSVAGPESTEPPGPGKAHSGGANP 281
G + GP + PP P GGA P
Sbjct: 601 GPLGGPAGSRPPLPNLLGFGGAAP 624
>AY604021-1|AAT38515.1| 118|Anopheles gambiae LZ9988P protein.
Length = 118
Score = 24.2 bits (50), Expect = 3.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 4 MDSVAAVSAVFINNNGTIIPC 66
+DS+AA+SA ++ NG+ I C
Sbjct: 29 LDSLAALSAKELDTNGSKIKC 49
>AY146735-1|AAO12095.1| 149|Anopheles gambiae odorant-binding
protein AgamOBP25 protein.
Length = 149
Score = 24.2 bits (50), Expect = 3.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 4 MDSVAAVSAVFINNNGTIIPC 66
+DS+AA+SA ++ NG+ I C
Sbjct: 53 LDSLAALSAKELDTNGSKIKC 73
>U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein.
Length = 280
Score = 23.4 bits (48), Expect = 5.8
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 386 VHRDHEVPLDGRVGGRTGVHGATRAGQGTQWRREP 282
V R+ DG RTG G G TQW P
Sbjct: 129 VGRNLSDTFDGTFTMRTGADGLESMGFLTQWNGSP 163
>AY334004-1|AAR01129.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.4 bits (48), Expect = 5.8
Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 3/14 (21%)
Frame = +1
Query: 223 PSN---CSGHGVCN 255
PSN CSGHG CN
Sbjct: 30 PSNDAVCSGHGQCN 43
>AY334003-1|AAR01128.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.4 bits (48), Expect = 5.8
Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 3/14 (21%)
Frame = +1
Query: 223 PSN---CSGHGVCN 255
PSN CSGHG CN
Sbjct: 30 PSNDAVCSGHGQCN 43
>AY334002-1|AAR01127.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.4 bits (48), Expect = 5.8
Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 3/14 (21%)
Frame = +1
Query: 223 PSN---CSGHGVCN 255
PSN CSGHG CN
Sbjct: 30 PSNDAVCSGHGQCN 43
>AY334001-1|AAR01126.1| 194|Anopheles gambiae integrin protein.
Length = 194
Score = 23.4 bits (48), Expect = 5.8
Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 3/14 (21%)
Frame = +1
Query: 223 PSN---CSGHGVCN 255
PSN CSGHG CN
Sbjct: 30 PSNDAVCSGHGQCN 43
>AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding
protein AgamOBP45 protein.
Length = 356
Score = 23.4 bits (48), Expect = 5.8
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -2
Query: 296 WRREPGFTVTVTLGLQTPCP--EQLDGQIDECLLTIVSRTDSTD 171
W G V G P P E + + ECL +S D+TD
Sbjct: 87 WNDTTGMQTAVIEGFFHPDPLDELYENRTAECLRKELSHADTTD 130
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 23.4 bits (48), Expect = 5.8
Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 3/14 (21%)
Frame = +1
Query: 223 PSN---CSGHGVCN 255
PSN CSGHG CN
Sbjct: 606 PSNDAVCSGHGQCN 619
>AY146756-1|AAO12071.1| 282|Anopheles gambiae odorant-binding
protein AgamOBP40 protein.
Length = 282
Score = 23.0 bits (47), Expect = 7.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 284 PGFTVTVTLGLQTPCPE 234
P F ++T G+ T CPE
Sbjct: 147 PSFLTSLTKGIITDCPE 163
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,178
Number of Sequences: 2352
Number of extensions: 13142
Number of successful extensions: 47
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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