Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30168
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.94 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   5.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +3

Query: 387  WTSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMNSFPS 503
            W+S ++   W  T    +  +R   +S   RPT  ++P+
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPT 1081



 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 426  PVSTSHWSRTRQSSLPRRPT 485
            P +T+HW     +S   RPT
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPT 1196


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 257 EAIYDICRRNLDIERPTYTNLNRLIGQIV 343
           E I DIC R+ D       ++NR+ G I+
Sbjct: 510 EQIVDICIRSHDKLCDVCDSVNRIFGFII 538


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 575 WLAVCCTVVTSYPRM 619
           W  VC  VV  YPR+
Sbjct: 166 WREVCTFVVQVYPRL 180


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 595 GTAYSKPCTCHDGGRISPSG 536
           G A++ P   HD G  SP G
Sbjct: 50  GNAHTGPTGTHDAGFPSPRG 69


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/33 (21%), Positives = 18/33 (54%)
 Frame = +2

Query: 275 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 373
           C +     RPT+T L++ +  ++ ++   L+ +
Sbjct: 730 CWKECPKNRPTFTELSKSLEGLLENVAQYLQIE 762


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -3

Query: 628 PRSHPWVRRHHGTAYSKPCTCHDGGRISPSGWRARSMRL 512
           PRS    RR+ G A      C +  R+ P+G   R   +
Sbjct: 279 PRSQ---RRYTGRATCDCPNCQEAERLGPAGVHLRKKNI 314


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,240
Number of Sequences: 336
Number of extensions: 3340
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)