Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30168
(648 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 82 1e-17
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 82 1e-17
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 82 1e-17
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 82 1e-17
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 24 4.8
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 8.3
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 82.2 bits (194), Expect = 1e-17
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+
Sbjct: 100 NEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 159
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF + +AP+ S + L+V E
Sbjct: 160 HFFMPGFAPLTSRGSQQYRALTVPE 184
Score = 58.8 bits (136), Expect = 1e-10
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK + C LQGF + H LL+ ++ +Y + +++ P+P+VS V
Sbjct: 16 VRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTV 75
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D + +D
Sbjct: 76 VEPYNATLSIHQLVENTDETYCID 99
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 82.2 bits (194), Expect = 1e-17
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+
Sbjct: 100 NEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 159
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF + +AP+ S + L+V E
Sbjct: 160 HFFMPGFAPLTSRGSQQYRALTVPE 184
Score = 58.8 bits (136), Expect = 1e-10
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK + C LQGF + H LL+ ++ +Y + +++ P+P+VS V
Sbjct: 16 VRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTV 75
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D + +D
Sbjct: 76 VEPYNATLSIHQLVENTDETYCID 99
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 82.2 bits (194), Expect = 1e-17
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+
Sbjct: 100 NEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 159
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF + +AP+ S + L+V E
Sbjct: 160 HFFMPGFAPLTSRGSQQYRALTVPE 184
Score = 58.8 bits (136), Expect = 1e-10
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK + C LQGF + H LL+ ++ +Y + +++ P+P+VS V
Sbjct: 16 VRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTV 75
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D + +D
Sbjct: 76 VEPYNATLSIHQLVENTDETYCID 99
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 82.2 bits (194), Expect = 1e-17
Identities = 36/85 (42%), Positives = 53/85 (62%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+
Sbjct: 100 NEALYDICFRTLKVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRL 159
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF + +AP+ S + L+V E
Sbjct: 160 HFFMPGFAPLTSRGSQQYRALTVPE 184
Score = 58.8 bits (136), Expect = 1e-10
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK + C LQGF + H LL+ ++ +Y + +++ P+P+VS V
Sbjct: 16 VRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTV 75
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D + +D
Sbjct: 76 VEPYNATLSIHQLVENTDETYCID 99
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 23.8 bits (49), Expect = 4.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1
Query: 624 VHILGYDVTTVQHTASHV 571
+H + Y ++TV HTAS++
Sbjct: 733 IHTIEYVLSTVSHTASYL 750
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.0 bits (47), Expect = 8.3
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -3
Query: 361 RSSDRGDNLSDETIQVGVGWALNVEITAADVIDGFMSTMKAQSECS 224
R + DN DE+ Q G G + ++ + D F + Q C+
Sbjct: 1567 RGGSQFDNFLDESCQEGEGASSPPKVIELTIGDPFPAIAAGQMACN 1612
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,997
Number of Sequences: 2352
Number of extensions: 16842
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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