BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30168
(648 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 25 0.63
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 23 2.5
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 23 2.5
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 3.4
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 21 7.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 7.8
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 25.0 bits (52), Expect = 0.63
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP S P P H R+ R +P+ E
Sbjct: 101 RPVYISQPRPPHPRLRREAEPEAE 124
Score = 25.0 bits (52), Expect = 0.63
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP S P P H R+ R +P+ E
Sbjct: 157 RPVYISQPRPPHPRLRREAEPEAE 180
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P+ E
Sbjct: 45 RPVYIPQPRPPHPRLRREAEPEAE 68
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P+ E
Sbjct: 185 RPVYIPQPRPPHPRLRREAEPEAE 208
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P+ E
Sbjct: 213 RPVYIPQPRPPHPRLRREAEPEAE 236
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P+ E
Sbjct: 46 RPVYIPQPRPPHPRLRREAEPEAE 69
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P+ E
Sbjct: 74 RPVYIPQPRPPHPRLRREAEPEAE 97
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P+ E
Sbjct: 102 RPVYIPQPRPPHPRLRREAEPEAE 125
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P+ E
Sbjct: 17 RPVYIPQPRPPHPRLRREAEPEAE 40
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P+ E
Sbjct: 45 RPVYIPQPRPPHPRLRREAEPEAE 68
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P+ E
Sbjct: 73 RPVYIPQPRPPHPRLRREAEPEAE 96
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P+ E
Sbjct: 101 RPVYIPQPRPPHPRLRREAEPEAE 124
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P+ E
Sbjct: 157 RPVYIPQPRPPHPRLRREAEPEAE 180
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P+ E
Sbjct: 129 RPVYIPQPRPPHPRLRREAKPEAE 152
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 551 HFTIWLAGSKHAFVTRRRKAVHG 483
H T+W+AG++ R +HG
Sbjct: 89 HTTVWVAGAQRGNEQRCTVTMHG 111
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +3
Query: 477 RPTMNSFPSPSHKRMLRARQPDGE 548
RP P P H R+ R +P E
Sbjct: 46 RPIYIPQPRPPHPRLRREAEPKAE 69
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 ESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WS 105
+S SS V ++S SS+PS+++ G L WS
Sbjct: 357 QSQSSPKFVARREESNSSSPSLDLGKEGGLEAQWS 391
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,600
Number of Sequences: 438
Number of extensions: 4022
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -