Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30168
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 160 6e-40
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 160 6e-40
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 160 8e-40
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 160 8e-40
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 156 1e-38
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 156 1e-38
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 152 2e-37
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 86 2e-17
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 86 2e-17
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 84 7e-17
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 84 7e-17
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 83 1e-16
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 83 2e-16
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 83 2e-16
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 83 2e-16
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 83 2e-16
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 53 1e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 53 2e-07
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 36 0.031
At3g16350.1 68416.m02068 myb family transcription factor ; conta... 35 0.041
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.22
At4g04640.1 68417.m00679 ATP synthase gamma chain 1, chloroplast... 29 3.5
At2g27395.1 68415.m03308 cysteine protease-related contains simi... 29 3.5
At5g19610.1 68418.m02334 sec7 domain-containing protein similar ... 28 4.7
At3g01770.1 68416.m00116 DNA-binding bromodomain-containing prot... 27 8.1
At1g19920.1 68414.m02497 sulfate adenylyltransferase 2 / ATP-sul... 27 8.1
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 160 bits (389), Expect = 6e-40
Identities = 77/112 (68%), Positives = 90/112 (80%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI 265
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAESQTHASSPPTRW*NATPVMASTWLAVC 589
HF L +YAPVISAEKA+HEQLSVAE A P + P ++A C
Sbjct: 266 HFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
Score = 118 bits (284), Expect = 3e-27
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
IRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+V
Sbjct: 122 IRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSV 181
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYNS+L+TH+ LEH+D + ++D
Sbjct: 182 VEPYNSVLSTHSLLEHTDVSILLD 205
Score = 85.8 bits (203), Expect = 2e-17
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 633
+TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+
Sbjct: 291 ITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV 332
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 160 bits (389), Expect = 6e-40
Identities = 77/112 (68%), Positives = 90/112 (80%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI 265
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAESQTHASSPPTRW*NATPVMASTWLAVC 589
HF L +YAPVISAEKA+HEQLSVAE A P + P ++A C
Sbjct: 266 HFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
Score = 118 bits (284), Expect = 3e-27
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
IRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+V
Sbjct: 122 IRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSV 181
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYNS+L+TH+ LEH+D + ++D
Sbjct: 182 VEPYNSVLSTHSLLEHTDVSILLD 205
Score = 85.8 bits (203), Expect = 2e-17
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 633
+TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+
Sbjct: 291 ITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV 332
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 160 bits (388), Expect = 8e-40
Identities = 77/112 (68%), Positives = 89/112 (79%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI 265
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAESQTHASSPPTRW*NATPVMASTWLAVC 589
HF L +YAPVISAEKA+HEQLSVAE A P + P ++A C
Sbjct: 266 HFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
Score = 118 bits (284), Expect = 3e-27
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
IRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+V
Sbjct: 122 IRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSV 181
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYNS+L+TH+ LEH+D + ++D
Sbjct: 182 VEPYNSVLSTHSLLEHTDVSILLD 205
Score = 85.8 bits (203), Expect = 2e-17
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 633
+TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+
Sbjct: 291 ITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV 332
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 160 bits (388), Expect = 8e-40
Identities = 77/112 (68%), Positives = 89/112 (79%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRI 265
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAESQTHASSPPTRW*NATPVMASTWLAVC 589
HF L +YAPVISAEKA+HEQLSVAE A P + P ++A C
Sbjct: 266 HFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDP-RHGKYMACC 316
Score = 118 bits (284), Expect = 3e-27
Identities = 53/84 (63%), Positives = 66/84 (78%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
IRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+V
Sbjct: 122 IRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSV 181
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYNS+L+TH+ LEH+D + ++D
Sbjct: 182 VEPYNSVLSTHSLLEHTDVSILLD 205
Score = 85.8 bits (203), Expect = 2e-17
Identities = 33/42 (78%), Positives = 39/42 (92%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 633
+TN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+
Sbjct: 291 ITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV 332
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 156 bits (379), Expect = 1e-38
Identities = 76/112 (67%), Positives = 86/112 (76%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRI 265
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAESQTHASSPPTRW*NATPVMASTWLAVC 589
HF L +YAPVISA KAYHEQLSV E P + P ++A C
Sbjct: 266 HFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDP-RHGKYMACC 316
Score = 120 bits (289), Expect = 8e-28
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAV
Sbjct: 122 VRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAV 181
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYNS+L+TH+ LEH+D A ++D
Sbjct: 182 VEPYNSVLSTHSLLEHTDVAVLLD 205
Score = 86.6 bits (205), Expect = 1e-17
Identities = 34/42 (80%), Positives = 39/42 (92%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 633
+TNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+
Sbjct: 291 ITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV 332
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 156 bits (379), Expect = 1e-38
Identities = 76/112 (67%), Positives = 86/112 (76%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRI 265
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAESQTHASSPPTRW*NATPVMASTWLAVC 589
HF L +YAPVISA KAYHEQLSV E P + P ++A C
Sbjct: 266 HFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDP-RHGKYMACC 316
Score = 120 bits (289), Expect = 8e-28
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAV
Sbjct: 122 VRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAV 181
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYNS+L+TH+ LEH+D A ++D
Sbjct: 182 VEPYNSVLSTHSLLEHTDVAVLLD 205
Score = 86.6 bits (205), Expect = 1e-17
Identities = 34/42 (80%), Positives = 39/42 (92%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 633
+TNA FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+
Sbjct: 291 ITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV 332
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 152 bits (368), Expect = 2e-37
Identities = 70/93 (75%), Positives = 79/93 (84%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EAIYDICRR+LDIERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TEFQTNLVPYPRI
Sbjct: 206 NEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRI 265
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAESQTHASSP 532
HF L +YAPVIS+ KAYHEQ SV E T P
Sbjct: 266 HFMLSSYAPVISSAKAYHEQFSVPEITTSVFEP 298
Score = 116 bits (280), Expect = 1e-26
Identities = 53/84 (63%), Positives = 65/84 (77%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RKLAD CTGLQGFL+F+ LL+ERLSVD+GKKSKL F IYP+PQVSTAV
Sbjct: 122 LRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAV 181
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYNS+L+TH+ LEH+D ++D
Sbjct: 182 VEPYNSVLSTHSLLEHTDVVVLLD 205
Score = 83.8 bits (198), Expect = 9e-17
Identities = 32/43 (74%), Positives = 38/43 (88%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIA 636
+T + FEP+N M KCDPRHGKYMACC++YRGDVVPKDVN A+A
Sbjct: 291 ITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVA 333
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 85.8 bits (203), Expect = 2e-17
Identities = 39/85 (45%), Positives = 54/85 (63%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF +V +AP+ S + LSV E
Sbjct: 264 HFFMVGFAPLTSRGSQQYSALSVPE 288
Score = 61.3 bits (142), Expect = 5e-10
Identities = 27/84 (32%), Positives = 48/84 (57%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK A+ LQGF + H LL+ ++ +Y + + F+++P+P+VS V
Sbjct: 120 VRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTV 179
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D ++D
Sbjct: 180 VEPYNATLSVHQLVENADECMVLD 203
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAYHQN 648
+T ++ N M DPRHG+Y+ ++RG + K+V+ + QN
Sbjct: 289 LTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDEQMMNIQN 335
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 85.8 bits (203), Expect = 2e-17
Identities = 39/85 (45%), Positives = 54/85 (63%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF +V +AP+ S + LSV E
Sbjct: 264 HFFMVGFAPLTSRGSQQYSALSVPE 288
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK A+ C LQGF + H LL+ ++ +Y + + F+++P+P+VS V
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTV 179
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D ++D
Sbjct: 180 VEPYNATLSVHQLVENADECMVLD 203
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAYHQN 648
+T ++ N M DPRHG+Y+ ++RG + K+V+ + QN
Sbjct: 289 LTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQN 335
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+
Sbjct: 205 NEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRL 264
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF +V +AP+ S + L+V E
Sbjct: 265 HFFMVGFAPLTSRGSQQYISLTVPE 289
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS V
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D ++D
Sbjct: 181 VEPYNATLSVHQLVENADECMVLD 204
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAYHQN 648
+T ++ N M DPRHG+Y+ ++RG + K+V+ I QN
Sbjct: 290 LTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQN 336
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+
Sbjct: 205 NEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRL 264
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF +V +AP+ S + L+V E
Sbjct: 265 HFFMVGFAPLTSRGSQQYISLTVPE 289
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS V
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D ++D
Sbjct: 181 VEPYNATLSVHQLVENADECMVLD 204
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAYHQN 648
+T ++ N M DPRHG+Y+ ++RG + K+V+ I QN
Sbjct: 290 LTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQN 336
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF +V +AP+ S + L+V E
Sbjct: 264 HFFMVGFAPLTSRGSQQYRNLTVPE 288
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK A+ C LQGF + H LL+ ++ +Y + + F+++P+P+VS V
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTV 179
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D ++D
Sbjct: 180 VEPYNATLSVHQLVENADECMVLD 203
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAYHQN 648
+T ++ N M DPRHG+Y+ ++RG + K+V+ + QN
Sbjct: 289 LTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQN 335
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF +V +AP+ S + L+V E
Sbjct: 264 HFFMVGFAPLTSRGSQQYRSLTVPE 288
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS V
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D ++D
Sbjct: 180 VEPYNATLSVHQLVENADECMVLD 203
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAYHQN 648
+T ++ N M DPRHG+Y+ ++RG + K+V+ + QN
Sbjct: 289 LTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQN 335
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF +V +AP+ S + L+V E
Sbjct: 264 HFFMVGFAPLTSRGSQQYRSLTVPE 288
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS V
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D ++D
Sbjct: 180 VEPYNATLSVHQLVENADECMVLD 203
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAYHQN 648
+T ++ N M DPRHG+Y+ ++RG + K+V+ + QN
Sbjct: 289 LTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQN 335
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF +V +AP+ S + L+V E
Sbjct: 264 HFFMVGFAPLTSRGSQQYRALTVPE 288
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS V
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D ++D
Sbjct: 180 VEPYNATLSVHQLVENADECMVLD 203
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAYHQN 648
+T ++ N M DPRHG+Y+ ++RG + K+V+ + QN
Sbjct: 289 LTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQN 335
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 82.6 bits (195), Expect = 2e-16
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +2
Query: 254 HEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 433
+EA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + NL+P+PR+
Sbjct: 204 NEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRL 263
Query: 434 HFPLVTYAPVISAEKAYHEQLSVAE 508
HF +V +AP+ S + L+V E
Sbjct: 264 HFFMVGFAPLTSRGSQQYRALTVPE 288
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 182
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS V
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179
Query: 183 VEPYNSILTTHTTLEHSDCAFMVD 254
VEPYN+ L+ H +E++D ++D
Sbjct: 180 VEPYNATLSVHQLVENADECMVLD 203
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 508 VTNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAYHQN 648
+T ++ N M DPRHG+Y+ ++RG + K+V+ + QN
Sbjct: 289 LTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQN 335
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +2
Query: 260 AIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 439
A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF
Sbjct: 209 ALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 268
Query: 440 PLVTYAPVISAEKA 481
+ Y P+ +A
Sbjct: 269 LMTGYTPLTVERQA 282
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP-QVSTA 179
I + AD L+GF++ H L+E L+ Y KK ++++P + S
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 180 VVEPYNSILTTHTTLEHSDCAFMVD 254
VV+PYNS+LT ++DC ++D
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLD 206
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +2
Query: 260 AIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 439
A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF
Sbjct: 209 ALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 268
Query: 440 PLVTYAPVISAEKA 481
+ Y P+ +A
Sbjct: 269 LMTGYTPLTVERQA 282
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP-QVSTA 179
I + AD L+GF++ H L+E L+ Y KK ++++P + S
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 180 VVEPYNSILTTHTTLEHSDCAFMVD 254
VV+PYNS+LT ++DC ++D
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLD 206
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 35.5 bits (78), Expect = 0.031
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +1
Query: 346 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREG 480
L C RRR GP RV + L PP P+ + V + L REG
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
>At3g16350.1 68416.m02068 myb family transcription factor ; contains
Pfam profile: PF00249 Myb-like DNA-binding domain
Length = 387
Score = 35.1 bits (77), Expect = 0.041
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = -3
Query: 601 HHGTAYSKPCTCHDGGRISPSGWRARSMRL*LGDGKLFMVGL--LGRDDWRVRDQWEVDT 428
HH Y H G G R R + + +LF+VGL LG+ DWR + V +
Sbjct: 110 HHNEGYLSDDPAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTS 169
Query: 427 GVRHQVSLELGEVHIQ--SAVESQRSSDRGDNLSDETI 320
QV+ + I+ S+ +R S D ++DE +
Sbjct: 170 RTPTQVASHAQKYFIRHTSSSRRKRRSSLFDMVTDEMV 207
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 630 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 523
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At4g04640.1 68417.m00679 ATP synthase gamma chain 1, chloroplast
(ATPC1) identical to SP|Q01908 ATP synthase gamma chain
1, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}
Length = 373
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 446 VTYAPVISAEKAYHEQLSVAESQTHASSPPTRW*NATPVMAS 571
V+ P +SA+ + SV + T+ SSPP+R + +P+ AS
Sbjct: 11 VSSKPSLSADSSSLSFRSVLKCPTNTSSPPSRASSVSPLQAS 52
>At2g27395.1 68415.m03308 cysteine protease-related contains
similarity to senescence-specific cysteine protease
GI:5823018 from [Brassica napus]
Length = 86
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 591 QHTASHVLAMTGVAFHHLVGGLEACVCDSATESCSW 484
QH S + TG AF H GG+ C++ SC +
Sbjct: 13 QHPVSMGIEGTGAAFRHYSGGIFNGECETDFASCGY 48
>At5g19610.1 68418.m02334 sec7 domain-containing protein similar to
SP|Q42510 Pattern formation protein EMB30 (GNOM)
{Arabidopsis thaliana}; contains Pfam profile PF01369:
Sec7 domain
Length = 1375
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 192 YNSILTTHTTLEHSDCAFMVDMKPSMTSAAVIS 290
+ ++L +TT E + AF DMKP M + AV +
Sbjct: 777 FTTLLNPYTTPEETLFAFSHDMKPRMATLAVFT 809
>At3g01770.1 68416.m00116 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 620
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 254 VDHESTVRVLKGCVGGEDRVVGLDDGSGNLRRGVDG 147
+ H STVR K VGG +++ G +L G DG
Sbjct: 394 ISHISTVRTEKDSVGGLNQMEDASRGKLSLIEGADG 429
>At1g19920.1 68414.m02497 sulfate adenylyltransferase 2 /
ATP-sulfurylase 2 (ASA1) (MET3-1) (APS2) identical to
ATP sulfurylase (APS2) [Arabidopsis thaliana] GI:1575324
Length = 476
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -2
Query: 263 WLHVDHESTVRVLKGCVGGEDRVVGLDDGSGNLRRGVDGELQFRLLAVVNGETLHQ*GS 87
W+HV E LKG + ++ + L S L+ G + ++ ++ +T Q GS
Sbjct: 104 WVHVISEGWASPLKGFMREDEYLQSLHFNSLRLKNGTFVNMSLPIVLAIDDDTKEQIGS 162
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,899,195
Number of Sequences: 28952
Number of extensions: 327114
Number of successful extensions: 1015
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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