Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30167
         (759 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089227-1|AAL89965.1|  293|Drosophila melanogaster AT02326p pro...    29   5.2  
AE013599-696|AAF59057.2|  293|Drosophila melanogaster CG8584-PA ...    29   5.2  
AE013599-2588|AAM68478.1|  614|Drosophila melanogaster CG30110-P...    29   6.9  

>AY089227-1|AAL89965.1|  293|Drosophila melanogaster AT02326p
           protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 623 PDHXDNVGVSTIPNNANPRYI 561
           PD  DNVG S +P +A P Y+
Sbjct: 114 PDTHDNVGCSQLPEHAQPDYV 134


>AE013599-696|AAF59057.2|  293|Drosophila melanogaster CG8584-PA
           protein.
          Length = 293

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 623 PDHXDNVGVSTIPNNANPRYI 561
           PD  DNVG S +P +A P Y+
Sbjct: 114 PDTHDNVGCSQLPEHAQPDYV 134


>AE013599-2588|AAM68478.1|  614|Drosophila melanogaster CG30110-PA
           protein.
          Length = 614

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 318 ITPFR*SGTTREPSHRFHLPPDR-VSGRFCEXGSC 419
           + P + S  ++E     HLPP + +  +FC  GSC
Sbjct: 428 VKPVKRSAKSKEKKVILHLPPRKQIKNKFCTTGSC 462


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,457,532
Number of Sequences: 53049
Number of extensions: 604201
Number of successful extensions: 1001
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)