Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30167
         (759 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   4.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   4.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 196 LTAYCMFTLKLFLSGLYIVVHKIILSH 116
           L  + + T   F+ G Y+ VH  ++SH
Sbjct: 457 LDGFALPTNGRFMIGQYVTVHGDVISH 483


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 196 LTAYCMFTLKLFLSGLYIVVHKIILSH 116
           L  + + T   F+ G Y+ VH  ++SH
Sbjct: 457 LDGFALPTNGRFMIGQYVTVHGDVISH 483


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 489 NNPSSLLNR*EKKKLFILSSL*GEDIPWV 575
           NN S+ L   ++  + I++S   +D+PWV
Sbjct: 307 NNDSNSLPFIDRTPIEIINSGDVQDVPWV 335


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 489 NNPSSLLNR*EKKKLFILSSL*GEDIPWV 575
           NN S+ L   ++  + I++S   +D+PWV
Sbjct: 307 NNDSNSLPFIDRTPIEIINSGDVQDVPWV 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,579
Number of Sequences: 438
Number of extensions: 3819
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)