Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30166
         (591 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    57   4e-07
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    35   1.2  
UniRef50_A2R848 Cluster: Putative uncharacterized protein; n=1; ...    35   1.6  
UniRef50_Q6F990 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_A5E2X9 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 56.8 bits (131), Expect = 4e-07
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +1

Query: 433  MFPERYDMSFFKRGLWRVLSGRQRL 507
            +FPERYDMSFFKRGLWRVLSGRQRL
Sbjct: 949  VFPERYDMSFFKRGLWRVLSGRQRL 973


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = +1

Query: 535 MGDGNHSPSGGPYARL 582
           MGDGNHSPSG PYA L
Sbjct: 1   MGDGNHSPSGRPYASL 16


>UniRef50_A2R848 Cluster: Putative uncharacterized protein; n=1;
           Aspergillus niger|Rep: Putative uncharacterized protein
           - Aspergillus niger
          Length = 262

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = -2

Query: 503 RCLPLNTLHKPRLKKDMS*RSGNISISV*EXRPHSFCLF 387
           R LPL+TL +P L K  S R  N+S S    +PH  C+F
Sbjct: 36  RLLPLDTLAEPALDKFNSGRPCNLSSSPGVSKPHGHCIF 74


>UniRef50_Q6F990 Cluster: Putative uncharacterized protein; n=1;
           Acinetobacter sp. ADP1|Rep: Putative uncharacterized
           protein - Acinetobacter sp. (strain ADP1)
          Length = 211

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -3

Query: 247 HFKNNIMKIKNVIFKP*NDFYLSKIVYNTFIIIKTRLIYW 128
           HF+++I K+   +F P N   L   +  TF+I+ + L++W
Sbjct: 104 HFEDDINKLSKEVFSPTNHQKLKSTLVATFLILVSILVWW 143


>UniRef50_A5E2X9 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 428

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = -3

Query: 280 LNFTLNAPKKFHFKNNIMKIKNVIFKP*NDFYLSKIVYNTFIIIKTRLIYWENMK 116
           L+FT +A KK ++  +I  ++          Y++ IVY T  +I   +I+W NMK
Sbjct: 333 LSFTTDAEKKLNYYTDICYLQTP--------YINIIVYLTLAVISAIIIFWMNMK 379


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,762,583
Number of Sequences: 1657284
Number of extensions: 9726651
Number of successful extensions: 24100
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24085
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)