Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30166
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.9  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 69  YLFCSRINFYNTF 31
           YLFC+ ++FY  F
Sbjct: 72  YLFCASLSFYKAF 84


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 455 CPSSNEACGEY*AVGSGLLC 514
           CP  + ACG+   +  GL C
Sbjct: 117 CPDGSLACGDGNCIERGLFC 136


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 209 NHVFNLHYIIFEVKLLRRVESKI 277
           NH F+LH   F V  + RV S +
Sbjct: 531 NHPFHLHGHSFRVVAMERVGSHV 553


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 538 GDGNHSPSGGPYARLA 585
           G GN+ P GGP + ++
Sbjct: 530 GSGNNQPPGGPSSHVS 545


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 574 HTAHLMVSGYRRPWTSAMPGAE 509
           +T H+   G+  P+T  M G E
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVE 507


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,598
Number of Sequences: 336
Number of extensions: 2688
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)