Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30164
(661 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 25 0.85
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 25 0.85
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 25 0.85
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 1.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 4.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 4.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 4.5
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 21 7.9
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 7.9
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 7.9
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.6 bits (51), Expect = 0.85
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -1
Query: 400 TRHYLTVVN*EGYREYILSMVLESS 326
+++Y+T+++ G+R++I +M+ +S
Sbjct: 10 SKYYVTIIDAPGHRDFIKNMITGTS 34
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.6 bits (51), Expect = 0.85
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -1
Query: 400 TRHYLTVVN*EGYREYILSMVLESS 326
+++Y+T+++ G+R++I +M+ +S
Sbjct: 26 SKYYVTIIDAPGHRDFIKNMITGTS 50
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 0.85
Identities = 7/25 (28%), Positives = 20/25 (80%)
Frame = -1
Query: 400 TRHYLTVVN*EGYREYILSMVLESS 326
+++Y+T+++ G+R++I +M+ +S
Sbjct: 83 SKYYVTIIDAPGHRDFIKNMITGTS 107
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.1
Identities = 7/24 (29%), Positives = 19/24 (79%)
Frame = -1
Query: 397 RHYLTVVN*EGYREYILSMVLESS 326
++Y+T+++ G+R++I +M+ +S
Sbjct: 84 KYYVTIIDAPGHRDFIKNMITGTS 107
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 4.5
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 123 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDVVLSSDVITHFPVLGTRLC 293
I+SS +KT+ +K + NNY K+LY + ++I + + V ++ R
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPI--PVPVYYGNFPPRPM 138
Query: 294 VCGISLQARLP 326
IS+Q ++P
Sbjct: 139 GPWISMQEQIP 149
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 4.5
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 123 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDVVLSSDVITHFPVLGTRLC 293
I+SS +KT+ +K + NNY K+LY + ++I + + V ++ R
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPI--PVPVYYGNFPPRPM 138
Query: 294 VCGISLQARLP 326
IS+Q ++P
Sbjct: 139 GPWISMQEQIP 149
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 4.5
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 123 ILSSSRDKTLIV---WKLTRDENNYGIPQKRLYGHSHFISDVVLSSDVITHFPVLGTRLC 293
I+SS +KT+ +K + NNY K+LY + ++I + + V ++ R
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNINYIEQIPI--PVPVYYGNFPPRPM 138
Query: 294 VCGISLQARLP 326
IS+Q ++P
Sbjct: 139 GPWISMQEQIP 149
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 484 VMCQILTQYANPIIVSCG 537
V C +L Y PI +CG
Sbjct: 65 VSCPVLRAYTCPICGACG 82
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 7.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -2
Query: 462 SWMVYLHSARVFQSLIVLSREPDTI*RLSTEKATESTSLVW 340
SW + +F L++L+ +++ LS + ST+L W
Sbjct: 2 SWQRVFLAVGLFGVLLLLTNADNSVHILSKYQLITSTTLNW 42
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 513 GILGENLTHDTQSL 472
GILG L+H TQ+L
Sbjct: 249 GILGMALSHKTQNL 262
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,924
Number of Sequences: 438
Number of extensions: 4610
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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