BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS30162 (690 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ304411-1|CAC39104.1| 187|Anopheles gambiae LDL receptor protein. 38 4e-04 AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 2.3 AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 25 2.3 DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 24 5.2 AY176050-1|AAO19581.1| 522|Anopheles gambiae cytochrome P450 CY... 24 5.2 AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 23 9.1 >AJ304411-1|CAC39104.1| 187|Anopheles gambiae LDL receptor protein. Length = 187 Score = 37.5 bits (83), Expect = 4e-04 Identities = 19/54 (35%), Positives = 24/54 (44%) Frame = +3 Query: 405 CATNNGGCEQRCVNDPGSFHCECSPPLSLASDGKNVSHGYRWLLQNLFHLCAPP 566 CA NGGC C+ +P S+ C C + L +GK W LQ C P Sbjct: 4 CAHKNGGCSYICLLNPTSYSCACPIGIQLKDNGKTCK---SWPLQLSGVCCTVP 54 >AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. Length = 3320 Score = 25.0 bits (52), Expect = 2.3 Identities = 10/21 (47%), Positives = 17/21 (80%), Gaps = 2/21 (9%) Frame = +1 Query: 55 YHDDSGY--RAEEPHLTDTID 111 ++++ GY R E+P+LT+TID Sbjct: 2096 HYNEPGYLTRIEDPYLTETID 2116 >AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. Length = 3318 Score = 25.0 bits (52), Expect = 2.3 Identities = 10/21 (47%), Positives = 17/21 (80%), Gaps = 2/21 (9%) Frame = +1 Query: 55 YHDDSGY--RAEEPHLTDTID 111 ++++ GY R E+P+LT+TID Sbjct: 2097 HYNEPGYLTRIEDPYLTETID 2117 >DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 protein. Length = 961 Score = 23.8 bits (49), Expect = 5.2 Identities = 8/26 (30%), Positives = 15/26 (57%) Frame = +3 Query: 441 VNDPGSFHCECSPPLSLASDGKNVSH 518 VN G++ C +PP +GK +++ Sbjct: 544 VNSSGNYMCRSNPPAQSDHNGKIITY 569 >AY176050-1|AAO19581.1| 522|Anopheles gambiae cytochrome P450 CYP12F2 protein. Length = 522 Score = 23.8 bits (49), Expect = 5.2 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +2 Query: 278 EPV*ASMRSAGREYVVFLLPWVPVQRGKLLQAGAAVL 388 +PV +MR+AGR+ V L + +G + G+AVL Sbjct: 389 QPVAGNMRAAGRDLV---LQGYQIPKGTDIAMGSAVL 422 >AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. Length = 1009 Score = 23.0 bits (47), Expect = 9.1 Identities = 9/21 (42%), Positives = 11/21 (52%) Frame = -3 Query: 127 CCYL*RRWCQ*GAVPPLCIRC 65 CC + R +C A PPL C Sbjct: 74 CCEILRLYCDTSACPPLIEFC 94 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 811,295 Number of Sequences: 2352 Number of extensions: 19060 Number of successful extensions: 119 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 119 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 69831885 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -