Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30161
(718 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 94 7e-20
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 91 9e-19
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 90 1e-18
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 89 3e-18
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 89 4e-18
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 85 3e-17
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 85 4e-17
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 82 3e-16
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 77 9e-15
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 76 2e-14
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 76 2e-14
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 75 4e-14
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 74 8e-14
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 74 8e-14
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 73 2e-13
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 73 2e-13
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 73 3e-13
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 73 3e-13
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 53 2e-07
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 52 4e-07
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 52 4e-07
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 49 3e-06
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 43 2e-04
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 42 4e-04
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 39 0.003
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 39 0.003
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 39 0.003
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 39 0.003
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 38 0.005
At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase cyc... 30 1.8
At3g02610.1 68416.m00252 acyl-[acyl-carrier-protein] desaturase,... 27 9.4
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 94.3 bits (224), Expect = 7e-20
Identities = 43/63 (68%), Positives = 50/63 (79%)
Frame = +2
Query: 506 VSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDV 685
+SMANAG +TNGSQFFITTV TPWLD +H VFG+V++GMDVVQ IE T NDRP +DV
Sbjct: 562 LSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQGIEKVKTDKNDRPYQDV 621
Query: 686 VYL 694
L
Sbjct: 622 KIL 624
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 264 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXR 443
+G I + L+ + PKT ENF + Y FHRVI+ FMIQ +
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGY---YDNHLFHRVIRGFMIQ-TGDPLGDGTGGQ 539
Query: 444 SIYGERFEDENFK-LKH 491
SI+G FEDE K L+H
Sbjct: 540 SIWGREFEDEFHKSLRH 556
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 90.6 bits (215), Expect = 9e-19
Identities = 42/62 (67%), Positives = 50/62 (80%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 682
++SMANAG +TNGSQFFI T+KT WLDGRHVVFG+V+EGM+VV+ IE T DRP K
Sbjct: 186 VLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKK 245
Query: 683 VV 688
VV
Sbjct: 246 VV 247
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/79 (53%), Positives = 50/79 (63%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 446
G IVIGL+G VP+T ENF L +G GYKGS FHRVI++FMIQ +S
Sbjct: 107 GRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKS 166
Query: 447 IYGERFEDENFKLKHYGAG 503
+YG F+DENFKL H G G
Sbjct: 167 VYGRTFKDENFKLSHVGPG 185
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 90.2 bits (214), Expect = 1e-18
Identities = 44/79 (55%), Positives = 50/79 (63%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 446
G IV+GLFG+ VPKT ENF L + GYKGS FHR+IK+FMIQ S
Sbjct: 109 GRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGIS 168
Query: 447 IYGERFEDENFKLKHYGAG 503
IYG +FEDENF LKH G G
Sbjct: 169 IYGAKFEDENFTLKHTGPG 187
Score = 80.6 bits (190), Expect = 1e-15
Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 682
++SMANAG +TNGSQFFI TVKT WLD +HVVFG+V+EGM +V+ +E T A D P K
Sbjct: 188 ILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKG 247
Query: 683 V-VYLTRKLKL 712
+Y +L L
Sbjct: 248 CRIYACGELPL 258
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 89.0 bits (211), Expect = 3e-18
Identities = 51/103 (49%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 425
G IV+GLFGKTVPKT ENF L +G G YKGS FHR+I +FM+Q
Sbjct: 49 GRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHG 108
Query: 426 XXXXXRSIYGERFEDENFKLKHYGAGWFLWLMQAKTQMDLNFS 554
SIYGE+F DENFKLKH G G +L A D N S
Sbjct: 109 NGMGGESIYGEKFADENFKLKHTGPG---FLSMANAGQDTNGS 148
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +2
Query: 506 VSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 643
+SMANAG+DTNGSQFFITTV T WLDGRHVVFGKV+ GMDVV K+E
Sbjct: 136 LSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVE 181
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 88.6 bits (210), Expect = 4e-18
Identities = 46/86 (53%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 425
G +VIGLFGK VPKT ENF L +G G YKGSKFHR+I +FMIQ
Sbjct: 46 GRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHG 105
Query: 426 XXXXXRSIYGERFEDENFKLKHYGAG 503
SIYG++F DENFKLKH G G
Sbjct: 106 NGMGGESIYGQKFADENFKLKHTGPG 131
Score = 86.2 bits (204), Expect = 2e-17
Identities = 38/47 (80%), Positives = 44/47 (93%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 643
++SMAN+G+DTNGSQFFITTV T WLDGRHVVFGKV++GMDVV KIE
Sbjct: 132 VLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIE 178
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 85.4 bits (202), Expect = 3e-17
Identities = 40/62 (64%), Positives = 51/62 (82%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 682
++SMANAG +TNGSQFFI TVKT WLDG+HVVFG+V+EG+DVV+ IE V ++ +P K
Sbjct: 104 ILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIE-KVGSSSGKPTKP 162
Query: 683 VV 688
VV
Sbjct: 163 VV 164
Score = 70.9 bits (166), Expect = 8e-13
Identities = 39/86 (45%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 425
G IV+ L+ P+T ENF L +G G +KGSKFHRVI NFM Q
Sbjct: 18 GRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAG 77
Query: 426 XXXXXRSIYGERFEDENFKLKHYGAG 503
SIYG +FEDENF+ KH G G
Sbjct: 78 NGTGGESIYGSKFEDENFERKHTGPG 103
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/62 (62%), Positives = 51/62 (82%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 682
++SMANAG +TNGSQFFI TVKT WLDG+HVVFG+V+EG+DVV+ IE + ++ +P K
Sbjct: 105 ILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIE-KIGSSSGKPTKP 163
Query: 683 VV 688
VV
Sbjct: 164 VV 165
Score = 69.7 bits (163), Expect = 2e-12
Identities = 39/86 (45%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 425
G IV+ L+ PKT ENF L +G G +KGS FHRVI NFM Q
Sbjct: 19 GKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKG 78
Query: 426 XXXXXRSIYGERFEDENFKLKHYGAG 503
SIYG +FEDENF+ KH G G
Sbjct: 79 NGTGGESIYGAKFEDENFERKHTGPG 104
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 82.2 bits (194), Expect = 3e-16
Identities = 43/87 (49%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 425
G I+IGLFG VPKT ENF L +G G +KGS FHR+I FMIQ
Sbjct: 73 GRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRIIPGFMIQGGDFTRG 132
Query: 426 XXXXXRSIYGERFEDENFKLKHYGAGW 506
SIYG++F DENFKLKH G G+
Sbjct: 133 DGRGGESIYGDKFADENFKLKHTGPGF 159
Score = 81.0 bits (191), Expect = 7e-16
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +2
Query: 506 VSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 643
+SMAN+G D+NGSQFFITTV T WLDG HVVFGKVL GM+VV+KIE
Sbjct: 160 LSMANSGPDSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIE 205
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 77.4 bits (182), Expect = 9e-15
Identities = 36/60 (60%), Positives = 48/60 (80%), Gaps = 2/60 (3%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEM--TVTGANDRPV 676
++SMANAG +TNGSQFFI T KT WLDG+HVVFG+V+EG++VV+ IE + +G +PV
Sbjct: 105 ILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPV 164
Score = 66.9 bits (156), Expect = 1e-11
Identities = 38/86 (44%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 425
G IV+ L+ T P+T ENF L G G YKGS FHRVI FM Q
Sbjct: 19 GRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAG 78
Query: 426 XXXXXRSIYGERFEDENFKLKHYGAG 503
SIYG +F+DENF KH G G
Sbjct: 79 NGTGGESIYGSKFKDENFIKKHTGPG 104
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/65 (55%), Positives = 49/65 (75%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 682
++SMAN+G +TNGSQFFI T KT WLDG+HVVFG+V++G+DVV+ IE G++
Sbjct: 104 ILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEK--VGSDSGKTSK 161
Query: 683 VVYLT 697
VV +T
Sbjct: 162 VVTIT 166
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/87 (44%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +3
Query: 264 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXX 422
IG I + LF T P T ENF L +G G +KGS FHRVI FM Q
Sbjct: 17 IGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTA 76
Query: 423 XXXXXXRSIYGERFEDENFKLKHYGAG 503
SIYG +F+DENF KH GAG
Sbjct: 77 KNGTGGESIYGAKFKDENFIKKHTGAG 103
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 682
++SMANAG +TNGSQFFIT P LDG+H +FG+V GM+V++++ T DRP+ +
Sbjct: 95 ILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVCRGMEVIKRLGSVQTDNTDRPIHE 154
Query: 683 VVYLTRKL 706
V L K+
Sbjct: 155 VKILRTKV 162
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +3
Query: 255 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 434
+ ++G + ++ K P+T NF +L+++ Y FHR++K+F++Q
Sbjct: 15 ETSMGPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQ-GGDPTGTGR 70
Query: 435 XXRSIYGERFEDE-NFKLKHYGAG 503
SIYG +FEDE N +LKH GAG
Sbjct: 71 GGESIYGSKFEDEINKELKHTGAG 94
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 75.4 bits (177), Expect = 4e-14
Identities = 36/62 (58%), Positives = 44/62 (70%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 682
+V+MAN G D+NGSQFFITTVK WL+G HVV GKV++GMD V IE + +P K
Sbjct: 147 MVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKK 206
Query: 683 VV 688
VV
Sbjct: 207 VV 208
Score = 71.7 bits (168), Expect = 4e-13
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Frame = +3
Query: 264 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXX 422
+G IVIGL+G VPKT ENF L +G+ YKG+ FHR+I F+IQ
Sbjct: 60 LGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIH 119
Query: 423 XXXXXXRSIYGERFEDENFKLKHYGAG 503
SIYG F DENFK++H AG
Sbjct: 120 GDGKSSDSIYGGTFPDENFKIQHSHAG 146
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 74.1 bits (174), Expect = 8e-14
Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRPVK 679
L+SMAN+G +TNG QFFIT K WLD +HVVFG+VL +G+ V++KIE G N+RP
Sbjct: 130 LLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVMRKIENVAIGPNNRPKL 189
Query: 680 DVV 688
VV
Sbjct: 190 AVV 192
Score = 68.5 bits (160), Expect = 4e-12
Identities = 38/84 (45%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQ---KPEGE--GYKGSKFHRVIKNFMIQXXXXXXXXX 431
G I + LF PKT ENF Q + G+ GYK +FHRVIK+FM+Q
Sbjct: 46 GRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIKDFMVQSGDFLKNDG 105
Query: 432 XXXRSIYGERFEDENFKLKHYGAG 503
SIYG +FEDENF KH G G
Sbjct: 106 SGCMSIYGHKFEDENFTAKHTGPG 129
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 74.1 bits (174), Expect = 8e-14
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 682
++SMAN+G +TNGSQFFITT +T LDG+HVVFG+V +GM VV+ IE P +D
Sbjct: 105 MLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQD 164
Query: 683 VV 688
VV
Sbjct: 165 VV 166
Score = 72.1 bits (169), Expect = 3e-13
Identities = 41/87 (47%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQXXXXXX 422
G IVI L+ VPKT ENF L +G G YKG++FHRVIK FMIQ
Sbjct: 18 GRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISA 77
Query: 423 XXXXXXRSIYGERFEDENFKLKHYGAG 503
SIYG +F+DENF+LKH G
Sbjct: 78 NDGTGGESIYGLKFDDENFELKHERKG 104
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/47 (65%), Positives = 41/47 (87%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 643
++SMAN+G +TNGSQFFI T KT WLDG+HVVFGKV++G +VV+ +E
Sbjct: 104 ILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAME 150
Score = 70.5 bits (165), Expect = 1e-12
Identities = 38/86 (44%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 425
G +V+ LF P+T NF L G G YKGS FHR+I FM Q
Sbjct: 18 GRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRG 77
Query: 426 XXXXXRSIYGERFEDENFKLKHYGAG 503
SIYG +FEDENFKLKH G G
Sbjct: 78 NGTGGESIYGSKFEDENFKLKHTGPG 103
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/61 (50%), Positives = 45/61 (73%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 682
++SMAN+G +TNGSQFFIT K P L+G + +FGKV+ G +V+ +E T TG DRP+ +
Sbjct: 86 MLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHGFEVLDIMEKTQTGPGDRPLAE 145
Query: 683 V 685
+
Sbjct: 146 I 146
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/82 (39%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 261 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 440
N+G I +F VPK+ ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEIFCDEVPKSAENFLALCASGY---YDGTIFHRNIKGFMIQ-GGDPKGTGKGG 63
Query: 441 RSIYGERFEDE-NFKLKHYGAG 503
SI+G++F DE LKH G
Sbjct: 64 TSIWGKKFNDEIRDSLKHNARG 85
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 72.5 bits (170), Expect = 3e-13
Identities = 42/90 (46%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +3
Query: 258 DNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQXXX 413
D + IVI LF VPKT ENF L G G +KGS FHRVIK FM Q
Sbjct: 18 DPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGD 77
Query: 414 XXXXXXXXXRSIYGERFEDENFKLKHYGAG 503
SIYG +F DENF+L H GAG
Sbjct: 78 FSNGNGTGGESIYGGKFSDENFRLDHDGAG 107
Score = 71.3 bits (167), Expect = 6e-13
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEM--TVTGANDRPV 676
++SMAN G +TNGSQFFI + P LDG+HVVFGKV+EGM V++K+E+ T G PV
Sbjct: 108 VLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPV 167
Query: 677 K 679
K
Sbjct: 168 K 168
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 72.5 bits (170), Expect = 3e-13
Identities = 42/90 (46%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +3
Query: 258 DNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQXXX 413
D + IVI LF VPKT ENF L G G +KGS FHRVIK FM Q
Sbjct: 18 DPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGD 77
Query: 414 XXXXXXXXXRSIYGERFEDENFKLKHYGAG 503
SIYG +F DENF+L H GAG
Sbjct: 78 FSNGNGTGGESIYGGKFSDENFRLDHDGAG 107
Score = 71.3 bits (167), Expect = 6e-13
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEM--TVTGANDRPV 676
++SMAN G +TNGSQFFI + P LDG+HVVFGKV+EGM V++K+E+ T G PV
Sbjct: 108 VLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPV 167
Query: 677 K 679
K
Sbjct: 168 K 168
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/61 (39%), Positives = 38/61 (62%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 682
+VSMAN+G TNGSQFF+ L+ +H VFG V+ G+ + +E +DRP+++
Sbjct: 429 VVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEE 488
Query: 683 V 685
+
Sbjct: 489 I 489
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 446
G + I L P+ ENF L ++ Y G FHR I+NFMIQ S
Sbjct: 353 GDLNIELHCDIAPRACENFITLCERGY---YNGVAFHRSIRNFMIQ-GGDPTGTGKGGES 408
Query: 447 IYGERFEDE-NFKLKHYGAG 503
I+G+ F+DE N KL H G G
Sbjct: 409 IWGKPFKDEPNSKLLHSGRG 428
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Frame = +3
Query: 258 DNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQXXX 413
D T+V LF + PKT+ENF L +G G YKGS FHR++K Q
Sbjct: 18 DPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSFFHRIMKGSSAQAGD 77
Query: 414 XXXXXXXXXRSIYGERFEDENFKLKHYGAG 503
SIY +F DE+ KL+H G
Sbjct: 78 FVNRNGTAGESIYAGKFPDESPKLRHEETG 107
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 643
L+SM+ A +D GS F IT LD +VVFGK+++G ++++KIE
Sbjct: 108 LLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFGKLIQGKEILKKIE 154
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 506 VSMANAGKDTNGSQFFITTVKT-PWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKD 682
V+MA+ G++ N SQF+ T +LDG+H VFG++ EG D + +I +RP K+
Sbjct: 94 VAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRINEAYVDPKNRPYKN 153
Query: 683 V 685
+
Sbjct: 154 I 154
Score = 31.5 bits (68), Expect = 0.58
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = +3
Query: 261 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ---XXXXXXXXX 431
++G IVI L P T +NF +L + + Y G FH V K+F Q
Sbjct: 8 SLGDIVIDLHSDKCPLTCKNFLKLCKI---KYYNGCLFHTVQKDFTAQTGDPTGTGAGGD 64
Query: 432 XXXRSIYGER---FEDE-NFKLKHYGAG 503
+ +YGE+ ++DE + LKH G
Sbjct: 65 SIYKFLYGEQARFYKDEIHLDLKHSKTG 92
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +2
Query: 503 LVSMANAGK-DTNGSQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRPV 676
+V+MANA ++NGSQFF T K WLD +H +FGKV + + + ++ T +DRP+
Sbjct: 98 IVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKVTGDSIYNLLRLGEVDTSKDDRPL 157
Score = 37.5 bits (83), Expect = 0.009
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQXXXXXXXXXXXXR 443
G I + L+ K PK+ NF QL EGY + FHRVI F++Q
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL----EGYFDNTIFHRVIPGFLVQGGDPTGSGTGGD- 76
Query: 444 SIYGERFEDE 473
SIYG F DE
Sbjct: 77 SIYGGVFADE 86
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +2
Query: 503 LVSMANAGKDTNGSQFFITTVKTPW-LDGRHVVFGKVLEGMDVVQKIEMTVTGANDR-PV 676
++SMA D+NGSQF I +DG HVV GKV+EG+D+++ IE V R P
Sbjct: 101 IISMA----DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIEKEVITTTTRTPS 156
Query: 677 KDVV 688
K VV
Sbjct: 157 KPVV 160
Score = 36.7 bits (81), Expect = 0.015
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Frame = +3
Query: 267 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 425
G IVI LF P+T ENF L G G YKGS F ++ + M
Sbjct: 18 GRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIVPDLM----WCGGD 73
Query: 426 XXXXXRSIYGERFEDENFKLKH 491
I+ E +DE F L H
Sbjct: 74 IIFENEPIHSEELDDEYFILNH 95
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +2
Query: 536 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 655
NG++F IT V +P L+ +V GKVLEGM VV+K+ T
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKT 269
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 264 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 398
IG I+IGL+G VP T F + G Y+ F +++ ++
Sbjct: 105 IGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 545 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVYLTRKLKL 712
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + LKL
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGITGVVLKL 234
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 249 DWDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 404
D + + G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 84 DINTSKGLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 545 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVYLTRKLKL 712
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + LKL
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGITGVVLKL 234
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 249 DWDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 404
D + + G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 84 DINTSKGLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 545 QFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVYLTRKLKL 712
+ ITT P L+ + +VFG+VL+G DVVQ+IE T + +P + LKL
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIEEVDTDEHFQPKSPIGITGVVLKL 234
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 249 DWDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 404
D + + G I + LF + P+ + F L QK + +KG F RVIKN+++Q
Sbjct: 84 DINTSKGLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQ 132
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +2
Query: 500 WLVSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 673
++V A + G +FFI + + L+ + VFG+V +G DVVQ+IE T +P
Sbjct: 158 FMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIEEVETDDQYQP 215
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 255 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQ 404
D G++ I LF T P + F + Q +GY KG F RV+K+F+IQ
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFCQ----DGYFKGFLFSRVVKHFVIQ 129
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 530 DTNGSQFFITTVK--TPWLDGRHVVFGKVLEGMDVVQKIEMTVT 655
D +F ITT +P LDG ++VFG VLEG+DVV I T
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSIPT 234
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 264 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRV 383
+G +V+GL+G+ VP T F ++ YK + H++
Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTS-SSTSYKNTPVHKI 123
>At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 226
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 542 SQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 655
S F + P LD ++ VFGKV +G + + K+E T
Sbjct: 134 SSFSMLLGNAPHLDRQYAVFGKVTKGDETLSKLEEVPT 171
>At3g02610.1 68416.m00252 acyl-[acyl-carrier-protein] desaturase,
putative / stearoyl-ACP desaturase, putative similar to
Acyl-[acyl-carrier protein] desaturase from Spinacia
oleracea SP|P28645, Cucumis sativus SP|P32061, Ricinus
communis SP|P22337; contains Pfam profile PF03405 Fatty
acid desaturase
Length = 411
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 684 TSLTGRSFAPVTVISIFCTTSIPSKTLPKT 595
T+ G SF+P ++ + C + PSKT +T
Sbjct: 26 TTCLGSSFSPPRLLRVSCVATNPSKTSEET 55
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,293,035
Number of Sequences: 28952
Number of extensions: 313937
Number of successful extensions: 695
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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