Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30160
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   2.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   3.1  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    24   5.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.4  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.2  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   9.5  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 483  QLLLGHFCDTSDIGRFNRSS 542
            Q+L GH C  S + RFNR+S
Sbjct: 948  QVLSGHGCFRSYLHRFNRAS 967


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 491  KKLEPHVNALVFELCCNDDDGNDVE 417
            KKL P  N  +     ND +GND+E
Sbjct: 1044 KKLVPQGNGHLILRTTNDQEGNDME 1068


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 603 SPCCLKVCACFIRSSCPKPSGWND*TCQ 520
           SP C   C C  R +CP   G  +  C+
Sbjct: 14  SPNCGAGCGCESRCTCPCKDGAKEGCCK 41


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +1

Query: 310 IEPSLRSGNYYFSA 351
           +E +L+SGNY+F+A
Sbjct: 836 MEKALKSGNYFFTA 849


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 554 GHEERIKHAHTLRQHGD 604
           G EE++ H  T  +HGD
Sbjct: 737 GEEEKLSHEPTPTEHGD 753


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 393  QSVFYIRDLHIIPVIIIA 446
            +  +Y+ D+ I+PVII A
Sbjct: 1148 KQTWYLEDIRIVPVIISA 1165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,127
Number of Sequences: 2352
Number of extensions: 12985
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)