Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30158
         (354 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994096-1|AAX86009.1|   25|Anopheles gambiae 60s ribosomal prot...    27   0.21 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    22   5.9  

>AY994096-1|AAX86009.1|   25|Anopheles gambiae 60s ribosomal protein
           L41 protein.
          Length = 25

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 191 MRAXWRXKRMRQAKA*XEXDASRSK 265
           MRA WR KRMR+ K       +RSK
Sbjct: 1   MRAKWRKKRMRRLKRKRRKMRARSK 25


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 315 IHNCILLQVIKAPCTVYLDLDAS 247
           ++NCI+  V++  C V+    AS
Sbjct: 891 VYNCIVRSVLEYSCVVWSPTTAS 913


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,474
Number of Sequences: 2352
Number of extensions: 1029
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)