Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30156
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.5  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   7.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   7.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 103 INQYVRTCRRS*TGKN 56
           IN Y+ TC+   TG N
Sbjct: 42  INSYICTCKPGFTGSN 57


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 265 CVSVKGWGSRCNLRP 221
           CV++ G G RC  +P
Sbjct: 44  CVNLPGVGHRCQCQP 58


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 155 WLLEPIDIYNVNAPSTLRYKV 217
           WL  P  + N   P +LR+K+
Sbjct: 7   WLTPPHSLGNTVTPVSLRFKL 27


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 400 QVSNRYTNWTH*ISDRIL 347
           +V++ YT W + +SD +L
Sbjct: 672 EVTDWYTGWKNMLSDELL 689


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,804
Number of Sequences: 336
Number of extensions: 3486
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)