Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30147
(392 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074402-1|BAB85071.1| 1336|Homo sapiens protein ( Homo sapiens ... 29 4.1
AC104650-2|AAY40932.1| 1336|Homo sapiens unknown protein. 29 4.1
BC131785-1|AAI31786.1| 101|Homo sapiens SH3TC1 protein protein. 29 5.5
BC098390-1|AAH98390.1| 1083|Homo sapiens solute carrier family 1... 29 5.5
AK024497-1|BAB15787.1| 721|Homo sapiens FLJ00105 protein protein. 29 5.5
AK024493-1|BAB15783.1| 780|Homo sapiens FLJ00098 protein protein. 29 5.5
AF105365-1|AAD39741.1| 1083|Homo sapiens K-Cl cotransporter KCC4... 29 5.5
DQ001411-1|AAY17216.1| 696|Homo sapiens neuregulin-3 protein. 28 9.5
BX537919-1|CAD97902.1| 621|Homo sapiens hypothetical protein pr... 28 9.5
AL589782-1|CAI17213.1| 713|Homo sapiens neuregulin 3 protein. 28 9.5
AL513204-1|CAH73645.1| 713|Homo sapiens neuregulin 3 protein. 28 9.5
AL391478-1|CAI15622.1| 713|Homo sapiens neuregulin 3 protein. 28 9.5
AL354749-1|CAH70641.1| 713|Homo sapiens neuregulin 3 protein. 28 9.5
AL136085-1|CAH71050.1| 713|Homo sapiens neuregulin 3 protein. 28 9.5
AL096706-1|CAI22410.1| 713|Homo sapiens neuregulin 3 protein. 28 9.5
>AK074402-1|BAB85071.1| 1336|Homo sapiens protein ( Homo sapiens
cDNA FLJ23822 fis, clone HUV00387. ).
Length = 1336
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = -3
Query: 267 GGGSHFDIMLPAIKFP*YDWAEAAMLPAIIP---DALKPSRGATIGIKNPPMQRDAPPTM 97
GGGS D + + P W +A A P D P+R A PP Q PT
Sbjct: 24 GGGSTRDQVRTVVMRPSVSWEKAGPEEAKAPVRGDEAPPARVAGPAAGTPPCQMGVYPTD 83
Query: 96 LTIR 85
LT++
Sbjct: 84 LTLQ 87
>AC104650-2|AAY40932.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = -3
Query: 267 GGGSHFDIMLPAIKFP*YDWAEAAMLPAIIP---DALKPSRGATIGIKNPPMQRDAPPTM 97
GGGS D + + P W +A A P D P+R A PP Q PT
Sbjct: 24 GGGSTRDQVRTVVMRPSVSWEKAGPEEAKAPVRGDEAPPARVAGPAAGTPPCQMGVYPTD 83
Query: 96 LTIR 85
LT++
Sbjct: 84 LTLQ 87
>BC131785-1|AAI31786.1| 101|Homo sapiens SH3TC1 protein protein.
Length = 101
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = -3
Query: 267 GGGSHFDIMLPAIKFP*YDWAEAAMLPAIIP---DALKPSRGATIGIKNPPMQRDAPPTM 97
GGGS D + + P W +A A P D P+R A PP Q PT
Sbjct: 24 GGGSTRDQVRTVVMRPSVSWEKAGPEEAKAPVRGDEAPPARVAGPAAGTPPCQMGVYPTD 83
Query: 96 LTI 88
LT+
Sbjct: 84 LTL 86
>BC098390-1|AAH98390.1| 1083|Homo sapiens solute carrier family 12
(potassium/chloride transporters), member 7 protein.
Length = 1083
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = -3
Query: 333 IQNVLTSSSYLFLTNLWSWCYHGGGSHFDIMLPAIKFP*YDWAEAAMLPAIIPDALKPSR 154
IQ + ++S +FL NLWS H G +P++ P + + A+ LP ++ D + S
Sbjct: 364 IQGIPGAASGVFLENLWSTYAHAGAFVEKKGVPSV--PVAEESRASALPYVLTD-IAASF 420
Query: 153 GATIGIKNP 127
+GI P
Sbjct: 421 TLLVGIYFP 429
>AK024497-1|BAB15787.1| 721|Homo sapiens FLJ00105 protein protein.
Length = 721
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = -3
Query: 333 IQNVLTSSSYLFLTNLWSWCYHGGGSHFDIMLPAIKFP*YDWAEAAMLPAIIPDALKPSR 154
IQ + ++S +FL NLWS H G +P++ P + + A+ LP ++ D + S
Sbjct: 2 IQGIPGAASGVFLENLWSTYAHAGAFVEKKGVPSV--PVAEESRASALPYVLTD-IAASF 58
Query: 153 GATIGIKNP 127
+GI P
Sbjct: 59 TLLVGIYFP 67
>AK024493-1|BAB15783.1| 780|Homo sapiens FLJ00098 protein protein.
Length = 780
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = -3
Query: 333 IQNVLTSSSYLFLTNLWSWCYHGGGSHFDIMLPAIKFP*YDWAEAAMLPAIIPDALKPSR 154
IQ + ++S +FL NLWS H G +P++ P + + A+ LP ++ D + S
Sbjct: 61 IQGIPGAASGVFLENLWSTYAHAGAFVEKKGVPSV--PVAEESRASALPYVLTD-IAASF 117
Query: 153 GATIGIKNP 127
+GI P
Sbjct: 118 TLLVGIYFP 126
>AF105365-1|AAD39741.1| 1083|Homo sapiens K-Cl cotransporter KCC4
protein.
Length = 1083
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = -3
Query: 333 IQNVLTSSSYLFLTNLWSWCYHGGGSHFDIMLPAIKFP*YDWAEAAMLPAIIPDALKPSR 154
IQ + ++S +FL NLWS H G +P++ P + + A+ LP ++ D + S
Sbjct: 364 IQGIPGAASGVFLENLWSTYAHAGAFVEKKGVPSV--PVAEESRASTLPYVLTD-IAASF 420
Query: 153 GATIGIKNP 127
+GI P
Sbjct: 421 TLLVGIYFP 429
>DQ001411-1|AAY17216.1| 696|Homo sapiens neuregulin-3 protein.
Length = 696
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 231 WPEALYQSDCRRHDSTNSISLSKTDNCCSSIHS 329
WP A Y + HDST S +LS + SS S
Sbjct: 224 WPTAAYATSSYLHDSTPSWTLSPFQDAASSSSS 256
>BX537919-1|CAD97902.1| 621|Homo sapiens hypothetical protein
protein.
Length = 621
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 236 RPLNSRNTTGLKLQCFPPLFPMR*SRAEVPRLGSKTLPCKET 111
+P+NS+ TG Q PP+ R P SKT+ E+
Sbjct: 121 KPINSKAVTGQTTQVSPPVIAGRVLSQSTPGTPSKTITISES 162
>AL589782-1|CAI17213.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 231 WPEALYQSDCRRHDSTNSISLSKTDNCCSSIHS 329
WP A Y + HDST S +LS + SS S
Sbjct: 224 WPTAAYATSSYLHDSTPSWTLSPFQDAASSSSS 256
>AL513204-1|CAH73645.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 231 WPEALYQSDCRRHDSTNSISLSKTDNCCSSIHS 329
WP A Y + HDST S +LS + SS S
Sbjct: 224 WPTAAYATSSYLHDSTPSWTLSPFQDAASSSSS 256
>AL391478-1|CAI15622.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 231 WPEALYQSDCRRHDSTNSISLSKTDNCCSSIHS 329
WP A Y + HDST S +LS + SS S
Sbjct: 224 WPTAAYATSSYLHDSTPSWTLSPFQDAASSSSS 256
>AL354749-1|CAH70641.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 231 WPEALYQSDCRRHDSTNSISLSKTDNCCSSIHS 329
WP A Y + HDST S +LS + SS S
Sbjct: 224 WPTAAYATSSYLHDSTPSWTLSPFQDAASSSSS 256
>AL136085-1|CAH71050.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 231 WPEALYQSDCRRHDSTNSISLSKTDNCCSSIHS 329
WP A Y + HDST S +LS + SS S
Sbjct: 224 WPTAAYATSSYLHDSTPSWTLSPFQDAASSSSS 256
>AL096706-1|CAI22410.1| 713|Homo sapiens neuregulin 3 protein.
Length = 713
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 231 WPEALYQSDCRRHDSTNSISLSKTDNCCSSIHS 329
WP A Y + HDST S +LS + SS S
Sbjct: 224 WPTAAYATSSYLHDSTPSWTLSPFQDAASSSSS 256
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,110,572
Number of Sequences: 237096
Number of extensions: 1241149
Number of successful extensions: 2144
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2144
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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