Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30144
         (399 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...   162   1e-40
Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical pr...    38   0.004
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    28   2.8  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    28   2.8  
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    27   3.7  
Z92782-8|CAB07185.1|  197|Caenorhabditis elegans Hypothetical pr...    27   6.5  

>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score =  162 bits (393), Expect = 1e-40
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = +1

Query: 1   VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIP 180
           VEAKQPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN +EENDEVLV+GFGR GHAVGDIP
Sbjct: 57  VEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIP 116

Query: 181 GVRFKVVKVANVSLLALYKEKKERP 255
           GVRFK+VKVAN SL+AL+K KKERP
Sbjct: 117 GVRFKIVKVANTSLIALFKGKKERP 141


>Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical
           protein T03D8.2 protein.
          Length = 157

 Score = 37.5 bits (83), Expect = 0.004
 Identities = 21/49 (42%), Positives = 33/49 (67%)
 Frame = +1

Query: 10  KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRK 156
           K+PNS  RKC  V+L   G +V A++P  G  ++++E+ +VLV G GR+
Sbjct: 89  KKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLVKG-GRR 133


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 197 TLKRTPGMSPTA*PLRPNPATSTSS 123
           T  RTP  +P A P RP P+ S+++
Sbjct: 38  TTMRTPAATPAAPPTRPTPSRSSAA 62


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 197 TLKRTPGMSPTA*PLRPNPATSTSS 123
           T  RTP  +P A P RP P+ S+++
Sbjct: 167 TTMRTPAATPAAPPTRPTPSRSSAA 191


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 76  TAFVPRDGCLNHIEEN 123
           T FVP+DG LN I+EN
Sbjct: 653 TPFVPKDGVLNVIDEN 668


>Z92782-8|CAB07185.1|  197|Caenorhabditis elegans Hypothetical
           protein F14F8.9 protein.
          Length = 197

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 100 CLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKV 207
           C N + E+DEV+    G+  H+   +P +  K++++
Sbjct: 129 CKNKLIEHDEVVTLIIGKGNHSRHQVPVIYNKLIEI 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,191,056
Number of Sequences: 27780
Number of extensions: 157233
Number of successful extensions: 459
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)