Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30142
         (388 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     26   0.15 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    26   0.15 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           26   0.15 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.26 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   0.60 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   0.60 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.3  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   5.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    20   9.8  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    20   9.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   9.8  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 25.8 bits (54), Expect = 0.15
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 155 WPWSRRSWTSAASCGTPAPGL 217
           +PW R+   + AS GT APG+
Sbjct: 211 YPWMRKVHVAGASNGTFAPGM 231



 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 188 PRSSTNADSTATVYSPGLG 132
           P  + N D  ++V SPG G
Sbjct: 137 PNVTPNCDVKSSVCSPGSG 155


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 25.8 bits (54), Expect = 0.15
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 155 WPWSRRSWTSAASCGTPAPGL 217
           +PW R+   + AS GT APG+
Sbjct: 211 YPWMRKVHVAGASNGTFAPGM 231



 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 188 PRSSTNADSTATVYSPGLG 132
           P  + N D  ++V SPG G
Sbjct: 137 PNVTPNCDVKSSVCSPGSG 155


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 25.8 bits (54), Expect = 0.15
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 155 WPWSRRSWTSAASCGTPAPGL 217
           +PW R+   + AS GT APG+
Sbjct: 211 YPWMRKVHVAGASNGTFAPGM 231



 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 188 PRSSTNADSTATVYSPGLG 132
           P  + N D  ++V SPG G
Sbjct: 137 PNVTPNCDVKSSVCSPGSG 155


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.26
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = -3

Query: 212 LGPVFHSWPRSSTNADSTATVYS--PGLGTLTSCWAEKKSRTGATVCTAVSTGGTLVSST 39
           +G  FH W +S   A S ++  S  P   T TS      SR+  T C++V T  +  S  
Sbjct: 60  VGKGFHPWKKSPQGAPSPSSTPSSLPTQRTSTSN-PTYSSRSVMTSCSSVPTTASYGSDL 118

Query: 38  VF 33
            F
Sbjct: 119 YF 120


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 0.60
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 235 HDDPSPKCPIRTTAEEGFDPEILLM 309
           H+D + + P R     G DPE LL+
Sbjct: 290 HEDATERFPGRLAVNTGQDPESLLI 314


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 0.60
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 235 HDDPSPKCPIRTTAEEGFDPEILLM 309
           H+D + + P R     G DPE LL+
Sbjct: 290 HEDATERFPGRLAVNTGQDPESLLI 314


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 291 IKTFLCCCANWTLRTRIVVSLDDNRSPGA 205
           + +F C C + TL     +++DD R PGA
Sbjct: 241 VNSFSCSCPSGTLGYICEINVDDCR-PGA 268


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 138 AGHADQLLGGEEVSDGRDR 82
           A H DQ +G E++   RD+
Sbjct: 932 AYHGDQWVGFEDIKSVRDK 950


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 107 KKSRTGATVCTAVSTGGTLVSSTVFSLVLGCWVAV 3
           KK    +TV  AV  GGT  +     ++ GC + V
Sbjct: 256 KKFAYNSTVKVAVIYGGTSTNHQRGRILGGCHILV 290


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 127 SVPSPGLYT 153
           S+P PGLYT
Sbjct: 71  SLPLPGLYT 79


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 14/62 (22%), Positives = 27/62 (43%)
 Frame = -3

Query: 248 LGSS*ALMTIEVLGPVFHSWPRSSTNADSTATVYSPGLGTLTSCWAEKKSRTGATVCTAV 69
           LG     M + ++  +F     +STN      + + G   L   ++ +K +TG  +   +
Sbjct: 250 LGFQDIYMIVYIIVVIFWYTVNASTNIFLCDEICNEGQTILGISYSLEKLKTGDEIQDLI 309

Query: 68  ST 63
           ST
Sbjct: 310 ST 311


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 14/62 (22%), Positives = 27/62 (43%)
 Frame = -3

Query: 248 LGSS*ALMTIEVLGPVFHSWPRSSTNADSTATVYSPGLGTLTSCWAEKKSRTGATVCTAV 69
           LG     M + ++  +F     +STN      + + G   L   ++ +K +TG  +   +
Sbjct: 250 LGFQDIYMIVYIIVVIFWYTVNASTNIFLCDEICNEGQTILGISYSLEKLKTGDEIQDLI 309

Query: 68  ST 63
           ST
Sbjct: 310 ST 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,722
Number of Sequences: 336
Number of extensions: 1149
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)