Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30139
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.9  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.7  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   6.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.7  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 235  RRGEGPAVTSYPSTRDKLSAGDYTYVEGERVVVDGNV 345
            R+ E      YP  R    +   T++EG +  V  NV
Sbjct: 1114 RKIESLEKMQYPDLRSPAVSNVTTFMEGSKATVKNNV 1150


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 235  RRGEGPAVTSYPSTRDKLSAGDYTYVEGERVVVDGNV 345
            R+ E      YP  R    +   T++EG +  V  NV
Sbjct: 1114 RKIESLEKMQYPDLRSPAVSNVTTFMEGSKATVKNNV 1150


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 274 CWGMTSRPAPRHAVGCK 224
           CW +TS P P + +  +
Sbjct: 323 CWSLTSSPPPPYQISAQ 339


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 513 TPIILHNIFACYYCLIIL 460
           TPII HN+    Y L ++
Sbjct: 167 TPIIFHNLTLITYSLCVI 184


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 513 TPIILHNIFACYYCLIIL 460
           TPII HN+    Y L ++
Sbjct: 167 TPIIFHNLTLITYSLCVI 184


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 410 PVSNSMRAKPNQYAVPGPRL 351
           P+ N + A  N Y+VP P +
Sbjct: 385 PLINILYANMNSYSVPEPTI 404


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 98  QHHTVVSQRGLQSVTY 51
           QHH +V   G   VTY
Sbjct: 187 QHHKIVLDMGKNCVTY 202


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 531 HMVFF*TPIILHNIFACYYCLIILVL 454
           H++F+   IIL  I+  YY  I+  +
Sbjct: 225 HLLFYCVLIILLCIYYFYYAFILFTV 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,933
Number of Sequences: 336
Number of extensions: 2344
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)