Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30131
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 157 8e-39
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 70 2e-12
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 70 2e-12
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 62 5e-10
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 61 7e-10
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 60 2e-09
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 56 2e-08
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 56 3e-08
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 56 3e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 56 3e-08
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 55 5e-08
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 3e-06
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 48 5e-06
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 48 7e-06
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 48 9e-06
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 46 3e-05
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 46 4e-05
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 43 3e-04
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 43 3e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 41 8e-04
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_7386| Best HMM Match : Helicase_C (HMM E-Value=0.086) 36 0.040
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 34 0.091
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 33 0.16
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 32 0.37
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 31 0.85
SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26) 31 0.85
SB_11957| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 30 2.0
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_27386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_9093| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 29 3.4
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 29 3.4
SB_35416| Best HMM Match : Cyanate_lyase (HMM E-Value=0.076) 28 6.0
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 28 7.9
SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 28 7.9
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 28 7.9
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 157 bits (381), Expect = 8e-39
Identities = 69/88 (78%), Positives = 79/88 (89%)
Frame = +2
Query: 2 RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 181
RCTYLVLDEADRMLDMGFEPQIR II+QIRPDRQTLMWSATWPKEV+ LA D+L DY+ I
Sbjct: 206 RCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHI 265
Query: 182 NIGSLQLSANHNILQIVDICQEHEKKIN 265
+GSL L+ANH ILQIVD+C++HEK+ N
Sbjct: 266 TVGSLGLTANHKILQIVDVCEDHEKEHN 293
Score = 51.2 bits (117), Expect = 7e-07
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGRS 590
IK+VINFD+PN +EDY+HRIGRT RS
Sbjct: 355 IKFVINFDFPNCTEDYVHRIGRTARS 380
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +2
Query: 602 GHPYAFFTPSNSRQAKDLVSVLQE 673
G Y FFT +N++QAK+LVSVLQE
Sbjct: 384 GTSYTFFTVNNAKQAKELVSVLQE 407
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 313 KTIIFVETKRKAENISRNIRRYG 381
+T+IF ETKR+A+ ++R +R G
Sbjct: 308 QTLIFTETKRRADELTRKLRSDG 330
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 85.4 bits (202), Expect = 4e-17
Identities = 47/87 (54%), Positives = 63/87 (72%), Gaps = 4/87 (4%)
Frame = +2
Query: 11 YLVLDEADRMLDMGFEPQIRKIIEQ-IRPD---RQTLMWSATWPKEVKKLAEDYLGDYIQ 178
+LVLDEADRMLDMGFEPQIR+I++Q P RQTLM+SAT+PKE++ LA D+L +YI
Sbjct: 1002 FLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLENYIF 1061
Query: 179 INIGSLQLSANHNILQIVDICQEHEKK 259
+ +G + S + NI Q V E +K+
Sbjct: 1062 LAVGKVG-STSENITQKVVWVDEFDKR 1087
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/77 (41%), Positives = 50/77 (64%)
Frame = +1
Query: 277 LQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEG 456
L ++ + P T++FVETK+ A+ + + + G+ +HGD++Q+ER+E L F+ G
Sbjct: 1090 LLDLLNASGPQQLTLVFVETKKGADALEMFLAKDGYYCTSIHGDRSQREREEALRTFRCG 1149
Query: 457 RASILVATDVAARGLDV 507
ILVAT VAARGLD+
Sbjct: 1150 DTPILVATAVAARGLDI 1166
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+K+VINFD P E+Y+HRIGRTGR
Sbjct: 1169 VKHVINFDLPTDIEEYVHRIGRTGR 1193
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 83.0 bits (196), Expect = 2e-16
Identities = 41/87 (47%), Positives = 63/87 (72%), Gaps = 4/87 (4%)
Frame = +2
Query: 11 YLVLDEADRMLDMGFEPQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEDYLGDYIQ 178
+L+LDEADRMLDMGFEP IR+I+E + + +RQTLM+SAT+P+E+++LA D+L DY+
Sbjct: 865 FLILDEADRMLDMGFEPAIRRIVESMGMPDKSERQTLMFSATFPEEIQRLAGDFLNDYLF 924
Query: 179 INIGSLQLSANHNILQIVDICQEHEKK 259
+ +G + +I Q V ++EK+
Sbjct: 925 LTVGRVG-GTTSDIEQTVIEVTDNEKR 950
Score = 74.1 bits (174), Expect = 9e-14
Identities = 35/85 (41%), Positives = 57/85 (67%)
Frame = +1
Query: 253 KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDE 432
K ++L +L + G +T++FVE+KR A+ ++ + G+P +HGD+ QQER+E
Sbjct: 949 KRDRLTQILGDAGTD-----RTLVFVESKRSADFLAIFLSGEGFPTTSIHGDRLQQEREE 1003
Query: 433 VLYQFKEGRASILVATDVAARGLDV 507
L F++GR +L+AT+VAARGLD+
Sbjct: 1004 ALDDFRKGRCPVLIATNVAARGLDI 1028
Score = 44.0 bits (99), Expect = 1e-04
Identities = 16/25 (64%), Positives = 22/25 (88%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+K+VINFD P+ ++Y+HRIGRTGR
Sbjct: 1031 VKHVINFDLPSDIDEYVHRIGRTGR 1055
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 81.8 bits (193), Expect = 5e-16
Identities = 42/71 (59%), Positives = 52/71 (73%), Gaps = 8/71 (11%)
Frame = +2
Query: 2 RCTYLVLDEADRMLDMGFEPQIRK--------IIEQIRPDRQTLMWSATWPKEVKKLAED 157
RCTYLVLDEADRM DMGFEPQI K II+ IRPDRQT+M+SAT+P++++ LA
Sbjct: 221 RCTYLVLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPDRQTVMFSATFPRQMEALARK 280
Query: 158 YLGDYIQINIG 190
L I+I +G
Sbjct: 281 ILDKPIEIQVG 291
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/74 (43%), Positives = 51/74 (68%)
Frame = +2
Query: 11 YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 190
YLVLDEADRM+DMGFE +R I + RQTL++SAT PK+++ A+ L + +N+G
Sbjct: 19 YLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNVG 78
Query: 191 SLQLSANHNILQIV 232
+A+ +++Q++
Sbjct: 79 RAG-AASLDVIQVL 91
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = +1
Query: 313 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAA 492
+ +IF E K ++I + G AV +HGDK+Q+ER + +F +G +LVATDVA+
Sbjct: 89 QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVAS 148
Query: 493 RGLD 504
+GLD
Sbjct: 149 KGLD 152
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/74 (43%), Positives = 51/74 (68%)
Frame = +2
Query: 11 YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIG 190
YLVLDEADRM+DMGFE +R I + RQTL++SAT PK+++ A+ L + +N+G
Sbjct: 19 YLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNVG 78
Query: 191 SLQLSANHNILQIV 232
+A+ +++Q++
Sbjct: 79 RAG-AASLDVIQVL 91
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/64 (42%), Positives = 41/64 (64%)
Frame = +1
Query: 313 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAA 492
+ +IF E K ++I + G AV +HGDK+Q+ER + +F +G +LVATDVA+
Sbjct: 89 QVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVAS 148
Query: 493 RGLD 504
+GLD
Sbjct: 149 KGLD 152
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/70 (44%), Positives = 49/70 (70%)
Frame = +2
Query: 47 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 226
MGFEP+I+KI+ IRPDRQT+M SATWP V+++A+ Y+ D +++ +G L L N+++
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVGCLDL----NVIE 56
Query: 227 IVDICQEHEK 256
++ EK
Sbjct: 57 FIEGMAPGEK 66
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGRS 590
I YVIN+D+P EDY+HR+GRTGR+
Sbjct: 111 ITYVINYDFPRHIEDYVHRVGRTGRA 136
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 415 QQERDEVLYQFKEGRASILVATDVAARGLDV 507
Q +R++ L FK G A IL+ATDVA+RGLD+
Sbjct: 78 QYDREQALDDFKTGLARILIATDVASRGLDI 108
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 66.9 bits (156), Expect = 1e-11
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 5/88 (5%)
Frame = +2
Query: 11 YLVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQTLMWSATWPKEVKKLAEDYL-GDYI 175
+L+LDEADRMLD+GF P I K+IE+ + RQTLM+SAT+P E++ LA +L DY+
Sbjct: 629 HLILDEADRMLDLGFGPDIHKLIEESNMTAKESRQTLMFSATFPDEIQHLAGSFLKPDYL 688
Query: 176 QINIGSLQLSANHNILQIVDICQEHEKK 259
+ +G + N +I Q V EK+
Sbjct: 689 FLAVGRVG-GTNLDITQHVITVNGSEKR 715
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/65 (40%), Positives = 43/65 (66%)
Frame = +1
Query: 313 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAA 492
+ +IF TKRK + ++ +R + MHGD Q+ER+ ++ F+ G++ +L++TDV A
Sbjct: 238 QAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWA 297
Query: 493 RGLDV 507
RGLDV
Sbjct: 298 RGLDV 302
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = +2
Query: 14 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 181
LVLDEAD ML+ GF+ QI + + P Q ++ SAT P E+ ++ ++ D I+I
Sbjct: 143 LVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRI 198
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+ VIN+D PN+ E YIHRIGR+GR
Sbjct: 305 VSLVINYDLPNNRELYIHRIGRSGR 329
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = +2
Query: 14 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYI 175
LVLDEADR+LDMGF P + IIE + +RQTL++SAT + VK LA L Y+
Sbjct: 200 LVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSATQTRSVKDLARLSLQSYV 253
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +1
Query: 259 NKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRY--GWPAVCMHGDKTQQERDE 432
+KLN L I + +K ++FV + ++ + I RR G P + ++G + Q +R
Sbjct: 259 DKLNFLFSFIRNHLK--SKILVFVSSCKQVKFIYEGFRRLQPGIPLMALYGKQKQLKRVA 316
Query: 433 VLYQFKEGRASILVATDVAARGL 501
+ +F + +L ATD+AARGL
Sbjct: 317 IYDEFCKKTQCVLFATDIAARGL 339
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 61.3 bits (142), Expect = 7e-10
Identities = 31/71 (43%), Positives = 50/71 (70%)
Frame = +2
Query: 14 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGS 193
LVLDEADRMLDMGF IR+++ ++ RQ L++SAT+ ++K LAE L + ++I + +
Sbjct: 7 LVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV-A 65
Query: 194 LQLSANHNILQ 226
+ +A+ +LQ
Sbjct: 66 RRNTASDQVLQ 76
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Frame = +2
Query: 2 RCTYLVLDEADRMLDMGFEPQIRKII---EQIRPDRQTLMWSATWPKEVKKLAEDYLGDY 172
+ TYLV+DE DRML MG E Q+RKI+ RQTL+WSAT P+ +++LA + +
Sbjct: 233 KITYLVMDEPDRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVLNP 292
Query: 173 IQINIG 190
I I +G
Sbjct: 293 ITIQVG 298
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/67 (32%), Positives = 41/67 (61%)
Frame = +1
Query: 304 PGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATD 483
P I+F + + + ++ +++ + A +H +K Q R +++ F++G+ ILVATD
Sbjct: 331 PYPPVIVFTSSIQNVDYVTELLKQEQFHASGLHSEKPQDYRFKLVKAFRDGKVDILVATD 390
Query: 484 VAARGLD 504
VA+RGLD
Sbjct: 391 VASRGLD 397
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+ +VIN+D P++ E YIHR GRTGR
Sbjct: 401 VTHVINYDLPDTIECYIHRCGRTGR 425
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/65 (35%), Positives = 41/65 (63%)
Frame = +1
Query: 313 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAA 492
+ +IF T+RK + ++ + MHGD +Q+ERD ++ +F+ G + +L+ TD+ A
Sbjct: 332 QAVIFANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIMKEFRSGSSRVLITTDLLA 391
Query: 493 RGLDV 507
RG+DV
Sbjct: 392 RGIDV 396
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +2
Query: 17 VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 181
VLDEAD ML GF+ QI + ++ Q ++ SAT P +V ++ ++ D ++I
Sbjct: 238 VLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRI 292
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHR 569
+ VIN+D P++ E+YIHR
Sbjct: 399 VSLVINYDLPSNRENYIHR 417
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/65 (44%), Positives = 43/65 (66%)
Frame = +1
Query: 313 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAA 492
+T+IF +TK++A ++ N V +HGD Q++R+ L F+EG+ LVATDVAA
Sbjct: 307 RTMIFAQTKKEANELALNSVLKQETQV-LHGDIPQKQREVTLKSFREGKFRCLVATDVAA 365
Query: 493 RGLDV 507
RGLD+
Sbjct: 366 RGLDI 370
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Frame = +2
Query: 11 YLVLDEADRMLDMGFEPQIRKII----EQIRPDR-QTLMWSATWPKEVKKLAEDYL 163
++VLDE DRMLDMGF + +++ + R D+ QTL++SAT P A+ Y+
Sbjct: 222 HVVLDEVDRMLDMGFAESVEEVLAASYAEDREDKPQTLLFSATLPPWAVNTAKKYM 277
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGRS 590
I V+ + P + YIHR GRTGR+
Sbjct: 373 IDLVVQCEPPKDVDAYIHRSGRTGRA 398
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/85 (32%), Positives = 49/85 (57%)
Frame = +2
Query: 2 RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 181
+C LV+DEAD++L M F+ + +II+ + +RQ L++SAT+P V+ E +L +I
Sbjct: 196 KCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEI 255
Query: 182 NIGSLQLSANHNILQIVDICQEHEK 256
N+ + H + Q +E +K
Sbjct: 256 NL--MDELTLHGVTQYYAFVEEKQK 278
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+ VINFD+P +SE Y+HRIGR+GR
Sbjct: 360 VNVVINFDFPKNSETYLHRIGRSGR 384
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/85 (32%), Positives = 49/85 (57%)
Frame = +2
Query: 2 RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 181
+C LV+DEAD++L M F+ + +II+ + +RQ L++SAT+P V+ E +L +I
Sbjct: 196 KCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEI 255
Query: 182 NIGSLQLSANHNILQIVDICQEHEK 256
N+ + H + Q +E +K
Sbjct: 256 NL--MDELTLHGVTQYYAFVEEKQK 278
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+ VINFD+P +SE Y+HRIGR+GR
Sbjct: 360 VNVVINFDFPKNSETYLHRIGRSGR 384
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +2
Query: 17 VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSL 196
V+DE D ML +GFE Q+++I+E++ RQT+++SAT P ++ +A L + I+ GS
Sbjct: 284 VVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFSATIPPSIEAMASRLLNAPVFISAGSP 343
Query: 197 QLSANHNILQIVDICQEHEKK 259
L + Q++ +E KK
Sbjct: 344 SLPTK-AVKQLILWVEEKSKK 363
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+ VINFD P + E+Y+H+IGR GR
Sbjct: 397 VSKVINFDMPPTYEEYVHQIGRAGR 421
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +1
Query: 319 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARG 498
++F++TK A + + G A +HG+ TQ +R E L +FK G ILVATD+AARG
Sbjct: 12 LVFLQTKWMAHKLRIVLGLMGLNADELHGNLTQLQRLEALQKFKNGEVDILVATDLAARG 71
Query: 499 LDV 507
LD+
Sbjct: 72 LDI 74
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +1
Query: 319 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVA 489
+IFV K +E ++ N+R+ + +HGD Q ER +VL QFK+ ILVATDVA
Sbjct: 733 LIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLGQFKKREIPILVATDVA 789
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = +2
Query: 2 RCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 181
R TYLV DEADRM DMGF L++SAT+ K+V+ L D L D +++
Sbjct: 664 RVTYLVFDEADRMFDMGF----------------ALLFSATFKKKVEHLCRDILVDPVRV 707
Query: 182 NIGSL 196
IG L
Sbjct: 708 VIGEL 712
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/47 (51%), Positives = 37/47 (78%)
Frame = +2
Query: 14 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 154
LV+DEADR+L++GFE ++R+II + RQT+++SAT K V+ LA+
Sbjct: 723 LVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFSATQTKNVEDLAK 769
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +1
Query: 313 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAA 492
K ++F + + S + P + +HG + QQ+R ++F ++ IL+ TDVAA
Sbjct: 820 KVMVFFSSCNSVKYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAA 879
Query: 493 RGLDV 507
RGLD+
Sbjct: 880 RGLDI 884
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+ +++ +D + ++YIHR+GRT R
Sbjct: 887 VDWIVQYDPADDPKEYIHRVGRTAR 911
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/62 (32%), Positives = 39/62 (62%)
Frame = +1
Query: 319 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARG 498
+IFV++K +A+ + + G +H D+TQ +RD ++ F+ G+ +L+AT++ RG
Sbjct: 387 LIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRG 446
Query: 499 LD 504
+D
Sbjct: 447 ID 448
Score = 34.7 bits (76), Expect = 0.069
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Frame = +2
Query: 11 YLVLDEADRMLDM---GFEPQIRKIIEQI-RPDRQTLMWSATWPKEVKKLAEDYLGDYIQ 178
+L+LDEAD++ + GF QI I + +PD ++SAT +++ A +L ++++
Sbjct: 285 WLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFSATLSNGIEEWAGLHLDNHVR 344
Query: 179 INIG 190
+ +G
Sbjct: 345 VTVG 348
Score = 34.7 bits (76), Expect = 0.069
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 510 GIKYVINFDYPNSSEDYIHRIG 575
G+ VIN+D+P S+ YIHRIG
Sbjct: 451 GVNLVINYDFPTSAVAYIHRIG 472
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +1
Query: 292 QSQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASIL 471
+ + I+F T + + + + G V +H +Q ER L +FK G IL
Sbjct: 242 RENDDNQSVIVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGERLAALARFKSGTIKIL 301
Query: 472 VATDVAARGLDV 507
VATDVA+RGLD+
Sbjct: 302 VATDVASRGLDI 313
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +2
Query: 11 YLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSAT 124
+LVLDEADR+LD F ++ I + + RQTL++SAT
Sbjct: 153 FLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLFSAT 190
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGRS 590
++ V+N + P +DYIHR+GRT R+
Sbjct: 316 VELVVNSNIPADPKDYIHRVGRTARA 341
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/65 (33%), Positives = 39/65 (60%)
Frame = +1
Query: 313 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAA 492
+ IIFV++ ++ +S + + +PA+C+H Q+ER QFK +LVAT++
Sbjct: 337 QVIIFVKSVQRCTALSHLLLKQNFPAICIHRGMKQEERLARYQQFKNFEKRMLVATNLFG 396
Query: 493 RGLDV 507
RG+D+
Sbjct: 397 RGMDI 401
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+ V N+D P S+ Y+HR+ R GR
Sbjct: 404 VNIVFNYDMPEDSDTYLHRVARAGR 428
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 47.6 bits (108), Expect = 9e-06
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+ +VINFD+PNS DYIHR+GRTGR
Sbjct: 765 VSHVINFDFPNSMVDYIHRVGRTGR 789
Score = 30.3 bits (65), Expect(2) = 0.046
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 403 GDKTQQERDEVLYQFKEGRASILVATDVAARGLD 504
G+ + R E +F+ A ILV TD+A+RGLD
Sbjct: 728 GNSGTRIRCERFEKFQNKTADILVCTDIASRGLD 761
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 8 TYLVLDEADRMLDMGFEPQIRKIIEQI 88
T+LV+DEAD M D F+ +I+ I
Sbjct: 531 THLVIDEADTMFDASFKSLTMEILHTI 557
Score = 23.8 bits (49), Expect(2) = 0.046
Identities = 9/38 (23%), Positives = 23/38 (60%)
Frame = +1
Query: 295 SQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGD 408
S+ PG +TI+F + + ++R++ ++ + +HG+
Sbjct: 651 SKSPG-QTIVFCNSASSCDWLARHLEQHNLSLIRLHGN 687
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/63 (31%), Positives = 39/63 (61%)
Frame = +1
Query: 319 IIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARG 498
++F T+R A ++ + + G + G+ T ++R VL +F+ G+ +L+ T+V+ARG
Sbjct: 348 VVFCHTRRNAAWLAEKMVKEGHAVALLSGEITIEQRIAVLERFRLGKEKLLITTNVSARG 407
Query: 499 LDV 507
+DV
Sbjct: 408 IDV 410
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 6/31 (19%)
Frame = +3
Query: 513 IKYVINFDYPNSS------EDYIHRIGRTGR 587
+ VIN+D P E Y+HRIGRTGR
Sbjct: 413 VTLVINYDMPMDMQGKADFETYLHRIGRTGR 443
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 24/76 (31%)
Frame = +2
Query: 8 TYLVLDEADRMLDMGFEPQIRKIIE-----QIRPD-------------------RQTLMW 115
T V+ ADRM+DMGFEP+++KI+E ++PD RQT+M+
Sbjct: 209 TVSVIGGADRMIDMGFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMF 268
Query: 116 SATWPKEVKKLAEDYL 163
+AT P +V++LA++YL
Sbjct: 269 TATMPPQVERLAKNYL 284
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 388 AVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDV 507
A +HG + Q++R+ L K G ILVATDVA RG+D+
Sbjct: 311 ATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDI 350
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGRS 590
+ +VIN+D + EDY HRIGRTGR+
Sbjct: 353 VSHVINYDMAKTIEDYTHRIGRTGRA 378
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+ VINFD+P +SE Y+HRIGR+GR
Sbjct: 12 VNVVINFDFPKNSETYLHRIGRSGR 36
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+ VINFD+P +SE Y+HRIGR+GR
Sbjct: 12 VNVVINFDFPKNSETYLHRIGRSGR 36
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/68 (33%), Positives = 38/68 (55%)
Frame = +1
Query: 304 PGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATD 483
PG +T++F T ++ +R + +H Q++R + L +FK +L+ATD
Sbjct: 456 PG-RTLVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATD 514
Query: 484 VAARGLDV 507
VAARGLD+
Sbjct: 515 VAARGLDI 522
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 11 YLVLDEADRMLDMGFEPQIRKIIEQI 88
YLV+DEADRM++ G ++ I+E I
Sbjct: 342 YLVIDEADRMVEQGHYEELSSILELI 367
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGRS 590
I++VI++ P E Y+HR GRT R+
Sbjct: 525 IEHVIHYQVPKDPEVYVHRSGRTARA 550
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/58 (31%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +2
Query: 17 VLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGD--YIQIN 184
+LDEAD++LD F+ QI I + ++Q + +SAT+P+ + + Y+ + ++++N
Sbjct: 160 ILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYPEVLANHLKKYMTEPTFVRLN 217
Score = 36.7 bits (81), Expect = 0.017
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+ V+N D P++ E Y+HRIGR GR
Sbjct: 283 VNLVVNMDVPHNGETYLHRIGRAGR 307
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 394 CMHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVVVSNM 522
C G +TQ +R E + + K IL++TD+ ARG+D N+
Sbjct: 243 CTAGSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNL 285
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +1
Query: 412 TQQERDEVLYQFKEGRASILVATDVAARGLDV 507
+QQE++ ++ +FK+G +IL+AT VA GLD+
Sbjct: 983 SQQEQELIIEEFKKGVVNILIATSVAEEGLDI 1014
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 403 GDKTQQERDEVLYQFKEG-RASILVATDVAARGLDV 507
G TQ+E++EV+ +F+ G +I++AT VA GLD+
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDI 632
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +1
Query: 295 SQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILV 474
S E II+ T+ + ++ + R G A H +RD+V ++ EG+ +++
Sbjct: 244 SGEAKGSGIIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVIC 303
Query: 475 ATDVAARGLD 504
AT G+D
Sbjct: 304 ATISFGMGVD 313
>SB_7386| Best HMM Match : Helicase_C (HMM E-Value=0.086)
Length = 100
Score = 35.5 bits (78), Expect = 0.040
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +1
Query: 295 SQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILV 474
S E II+ T+ + ++ + R G A H +RD+V ++ EG+ +++
Sbjct: 26 SGEAKGSGIIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVIC 85
Query: 475 ATDVAARGLD 504
AT G+D
Sbjct: 86 ATISFGMGVD 95
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 34.3 bits (75), Expect = 0.091
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Frame = +2
Query: 47 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQ 226
MGFE I I+ + R+T ++SAT EV+ L L + +++ + +L+ N+ +
Sbjct: 1 MGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVRE-KLTKTKNVQR 59
Query: 227 IVD-------ICQEHEKKIN*MYYCKKLDKVKNLV 310
IC+ HEK + + K KN+V
Sbjct: 60 TPSTLQNFYLICRSHEKFSQLVAFLKARKDKKNMV 94
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 313 KTIIFVETKRKAENISRNIRRY--GWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDV 486
K ++F T S+ + ++ + +HG K + R ++ F++ + ILV TDV
Sbjct: 91 KNMVFFSTCACVNYFSKALTKFLPNVHIMALHG-KMKSNRHKIFDSFRKLESGILVCTDV 149
Query: 487 AARGLDV 507
ARG+D+
Sbjct: 150 MARGVDI 156
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGRSKIQRDIHMLSLPLQ 632
+ +VI +D P+S+ ++HR GRT R + + + LP +
Sbjct: 159 VNWVIQYDPPSSANAFVHRCGRTARIGNEGNAVVFLLPTE 198
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
+ V N+D P S+ Y+HR+ R GR
Sbjct: 31 VNIVFNYDMPEDSDTYLHRVARAGR 55
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 14 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 103
LVLDEAD ML+ GF+ QI + + P Q
Sbjct: 39 LVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 11 YLVLDEADRMLDMGFEPQIRKIIEQI 88
YLV+DEADRM++ G ++ I+E I
Sbjct: 13 YLVIDEADRMVEQGHYEELSSILELI 38
>SB_31989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1498
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -1
Query: 510 HNIKPSSCN---ISCYKNTSTTFLELIQNFISFLLSFIAM 400
H + P CN ++ YKN ST F+E I N S L M
Sbjct: 236 HTLSPGGCNCHLVTIYKNHSTLFIEAIPNIQSQRLGIFLM 275
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 522 VINFDYPNSSEDYIHRIGRTGRS 590
++N D+ EDYIHR+GRT R+
Sbjct: 119 ILNMDF--EKEDYIHRVGRTARA 139
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2
Query: 11 YLVLDEADRMLDMGFEPQ 64
YLV+DEADR+L+M FE +
Sbjct: 110 YLVMDEADRILNMDFEKE 127
>SB_2761| Best HMM Match : zf-TRAF (HMM E-Value=0.26)
Length = 436
Score = 31.1 bits (67), Expect = 0.85
Identities = 22/86 (25%), Positives = 41/86 (47%)
Frame = +1
Query: 175 SDQYRIITTFRKSQHSSNCRYLSRT*KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAEN 354
S QY+ + + + S H + R +T + + L+VLL G E ++ E+K A
Sbjct: 264 SQQYKTLPSEQSSPHKMSQREPLKTPEGDPLDVLLDINGNKSEIATASMDLTESKGAAAG 323
Query: 355 ISRNIRRYGWPAVCMHGDKTQQERDE 432
+ + G A+C +GD + E ++
Sbjct: 324 -ALPLSALG--ALCTYGDMSSDEEED 346
>SB_11957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 59 PQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNIL 223
P I K++E + W TW K +KL Y G+ + G +HN+L
Sbjct: 263 PCISKVVELRDQEFVIKWWKGTWLKSWEKLPSQYAGNSCVLFRGQYCQYRSHNLL 317
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGR 587
++ +I+++ P S E Y+ IGR GR
Sbjct: 857 VRAIIHYNMPKSFESYVQEIGRAGR 881
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 522 VINFDYPNSSEDYIHRIGRTGRS 590
VINF +P ++ ++HR+GR R+
Sbjct: 547 VINFHFPPKAKLFVHRVGRVARA 569
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 442 QFKEGRASILVATDVAARGLDV 507
+F+ + ++V TDVAARG+D+
Sbjct: 520 KFQHKKTMVMVVTDVAARGIDI 541
>SB_27386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 509 WYQICNKF*LS-KFVGGLHPSYWENWTFQNPKGHPYA 616
WY C+ L+ +++ G H Y E + N KGH Y+
Sbjct: 449 WYDDCHSANLNGEYLNGAHEQYAEGIVWYNWKGHGYS 485
>SB_9093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 509 WYQICNKF*LSKFVGGLHPSYWENWTFQNPKGHPYAFFTPSNSRQAKDL 655
+ +IC + F G + E F NP HP FFT S QA L
Sbjct: 7 YQRICVNKMIGTFTEGKQKKFHELTMFCNPLWHPSHFFTSLQSSQAFSL 55
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 397 MHGDKTQQERDEVLYQFKEGRASILVATDVAARGLDVVVSNM 522
+H E+D V+ +F +G + +L++T V G+DV + M
Sbjct: 98 LHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDVPNATM 139
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 421 ERDEVLYQFKEGRASILVATDVAARGLDVVVSN 519
++++VL F++ + ++LVAT V GLDV N
Sbjct: 132 KQEKVLKMFRKHQINLLVATSVVEEGLDVPKCN 164
>SB_35416| Best HMM Match : Cyanate_lyase (HMM E-Value=0.076)
Length = 646
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 214 QHSSNCRYLSRT*KENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRR 375
+ SS +L K K+N LQE G+ +P + +FV + N+ + R
Sbjct: 158 EDSSQEEFLPSPSKVQKVNAALQEKGEQDKPTLERQLFVAESTQLTNLVDQVNR 211
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 20 LDEADRMLDMGFEPQIRKIIEQIR 91
LDEAD+M+D F R+++E I+
Sbjct: 388 LDEADKMIDAYFREMQRRLMEDIK 411
>SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1449
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -2
Query: 635 NLKG*RKHMDVPLDFGTSSSPNTMDVILRRIWIIKIYYIFDTTTSSPRAATSVAT 471
N++ RK++D +F T + NT+D+ I +++Y F T T + T +AT
Sbjct: 479 NVRPCRKYLDAMRNFPTPA--NTIDICSWFGLINQVFYAFATATLQRTSKTRLAT 531
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 513 IKYVINFDYPNSSEDYIHRIGRTGRS 590
+ +VI D+ + +HR+GRT R+
Sbjct: 117 VTHVIQLDFATDAAQMLHRVGRTARA 142
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 307 GAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVL 438
G II+ +++ AE ++ + G A C H D + R +V+
Sbjct: 313 GDSGIIYCFSRKDAEQVAIEMSSRGIKAACYHADMPPESRSQVV 356
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 27.9 bits (59), Expect = 7.9
Identities = 24/110 (21%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Frame = +2
Query: 98 RQTLMWSATWPKEVKKLAEDYLGDYIQINIGSLQLSANHNILQIVD--ICQEHEKKIN*M 271
++ +M +A K++KKL +DY Y Q +L ++ + V + +E +
Sbjct: 22 KELVMKAAVDKKKLKKLGDDYKKQYKQDLTDALDGKLEEDLHEAVAAMLLPGNEADARTL 81
Query: 272 YYC-KKLDKVKNLVRKQ*FLLKPREKLRTYQGTSGDMAGQLFVCMAIKLN 418
Y+ K +D +K +K+ + + ++ + TSGD L M+++++
Sbjct: 82 YFAMKNIDSIKEEYQKK-YGCSLEDDVK--EETSGDFEDLLVALMSVRIS 128
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,572,823
Number of Sequences: 59808
Number of extensions: 440503
Number of successful extensions: 1294
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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