Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30130
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical p... 31 0.93
Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical p... 31 0.93
Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 30 1.2
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 30 1.2
AL021480-1|CAA16326.1| 133|Caenorhabditis elegans Hypothetical ... 30 1.2
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 30 1.2
Z68012-2|CAA92020.1| 408|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 29 2.8
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 29 2.8
Z81497-2|CAB04078.1| 781|Caenorhabditis elegans Hypothetical pr... 28 4.9
U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical p... 27 8.6
U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical p... 27 8.6
U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical pr... 27 8.6
U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 27 8.6
AF022978-3|AAG24182.2| 403|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z66512-7|CAA91321.1| 730|Caenorhabditis elegans Hypothetical
protein F52H3.1 protein.
Length = 730
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +1
Query: 4 KNTLNHYGNYLAKSWSVNEGCVLCKEKKIQLKE-DNLPSVMMAVFIEQATPFLEDFLDQV 180
K+ LN+ GNYL W+ GC C +++KE + +P + + +FI + PF+E+ L ++
Sbjct: 248 KSHLNYLGNYLGNRWNSQLGCRTCG---LEVKESEEVPLIALNLFISKPIPFIEEVLQKI 304
Query: 181 IDTDYPKNKIHLFIHNNVEYHENEVRNF 264
+ DYPK KI L+I+NN + +++F
Sbjct: 305 AEFDYPKEKIALYIYNNQPFSIKNIQDF 332
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Frame = +3
Query: 255 EKFFGAYSKEYASAKRINSGDFISEAEARNLAKERCINSACDYLFSVDSLSRL-ESNVLR 431
+ F + K Y + + IN I + EARN A E ++ F +D + E V++
Sbjct: 330 QDFLQKHGKSYYTKRVINGVTEIGDREARNEAIEWNKARNVEFAFLMDGDAYFSEPKVIK 389
Query: 432 YLL--SSGYDV--IAPMLTRPGKAWSNFWG 509
L+ S YDV IAPM+ +PGK ++NFWG
Sbjct: 390 DLIQYSKTYDVGIIAPMIGQPGKLFTNFWG 419
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = +2
Query: 506 GALNSAGFYARSADYMDIVYGVIKGVWNVPFI 601
GA+ + G+YARS DYM IV G G WNVPFI
Sbjct: 419 GAIAANGYYARSEDYMAIVKGNRVGYWNVPFI 450
>Z68748-12|CAN86588.1| 792|Caenorhabditis elegans Hypothetical
protein F13H10.4c protein.
Length = 792
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +3
Query: 408 RLESNVLRYLLSS---GYDVIAPMLTRPGKAWSNFWGLSTLLDFMRDPQIIWT*Y 563
R+ S Y L S GY+ + PM+ + + S L ++LD +RDP+I+WT Y
Sbjct: 627 RVTSRAPSYTLVSDAFGYNNLFPMMLKLIPSKSPI--LKSMLDKIRDPKILWTNY 679
>Z68748-10|CAL36500.1| 789|Caenorhabditis elegans Hypothetical
protein F13H10.4b protein.
Length = 789
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +3
Query: 408 RLESNVLRYLLSS---GYDVIAPMLTRPGKAWSNFWGLSTLLDFMRDPQIIWT*Y 563
R+ S Y L S GY+ + PM+ + + S L ++LD +RDP+I+WT Y
Sbjct: 624 RVTSRAPSYTLVSDAFGYNNLFPMMLKLIPSKSPI--LKSMLDKIRDPKILWTNY 676
>Z68748-9|CAL36499.1| 796|Caenorhabditis elegans Hypothetical
protein F13H10.4a protein.
Length = 796
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +3
Query: 408 RLESNVLRYLLSS---GYDVIAPMLTRPGKAWSNFWGLSTLLDFMRDPQIIWT*Y 563
R+ S Y L S GY+ + PM+ + + S L ++LD +RDP+I+WT Y
Sbjct: 631 RVTSRAPSYTLVSDAFGYNNLFPMMLKLIPSKSPI--LKSMLDKIRDPKILWTNY 683
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 252 GEKFFGAY--SKEYASAKRINSGDFISEAEAR-NLAKERCINSACD 380
GEK GAY +K+YAS K +GD+ SEA + A++ I A D
Sbjct: 37 GEKIGGAYDSTKQYASDKVSAAGDYASEAGKKVGDAEDSMIQGAYD 82
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = +1
Query: 133 FIEQATPFLEDFLDQVIDTDYPKNKIHLFIHNNVEYHENEVRNFSEPTLKNMPQQNV*IL 312
FI++ + D ++D D+ +++L + ++ R S + N+PQ +
Sbjct: 855 FIKKYKLEIYDQNQSLLDVDFTSTRLNL-LQPRIQNQPRRSRTVSNSSTSNIPQASASDS 913
Query: 313 E---TSFQKQKQETLQRKDASTVHATICSLWTACLVLKVTFYVICSLL 447
+ TS Q + + +H +LW L FY + LL
Sbjct: 914 KESNTSVPHSSQRQILVPELMDIHPISATLWNVIAALPSIFYRVNQLL 961
>AL021480-1|CAA16326.1| 133|Caenorhabditis elegans Hypothetical
protein Y39E4A.1 protein.
Length = 133
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 277 LKNMPQQNV*ILETSFQKQKQETLQRK--DASTVHATICSLWTACLVLKVTFY 429
++ +P+ + ++ K K + L+ K +A V+ T+ +WT CLVL V Y
Sbjct: 75 VQELPESDPSSIKPRVNKAKIKKLKNKLKNAKIVYWTMLGIWTICLVLFVLVY 127
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 252 GEKFFGAY--SKEYASAKRINSGDFISEAEAR-NLAKERCINSACD 380
GEK GAY +K+YAS K +GD+ SEA + A++ I A D
Sbjct: 37 GEKIGGAYDSTKQYASDKVSAAGDYASEAGKKVGDAEDSMIQGAYD 82
>Z68012-2|CAA92020.1| 408|Caenorhabditis elegans Hypothetical
protein T24D5.2 protein.
Length = 408
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +1
Query: 172 DQVIDTDYPKNKIHLFIHNNVEYHENEVRNFSEPTLKNMPQQNV*ILETSFQKQKQETLQ 351
D ++ + +H+ I NN + RN + L+NM QN+ + ++ F + + +
Sbjct: 152 DSILIRSDGDSTVHMGISNNTLFRN---RNMAIEELRNMLSQNIRVYKSLFVTNRSQQMG 208
Query: 352 RKDASTVHATI 384
D S +TI
Sbjct: 209 EMDLSKCVSTI 219
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 106 NLPSVMMAVFIEQATPFLEDFLDQVIDTDYPK 201
N P ++++ I++ FL ++ ++ +DTDYPK
Sbjct: 64 NAPKDIISMQIQETKAFLSEY-EEFVDTDYPK 94
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 106 NLPSVMMAVFIEQATPFLEDFLDQVIDTDYPK 201
N P ++++ I++ FL ++ ++ +DTDYPK
Sbjct: 64 NAPKDIISMQIQETKAFLSEY-EEFVDTDYPK 94
>Z81497-2|CAB04078.1| 781|Caenorhabditis elegans Hypothetical
protein F10C2.5 protein.
Length = 781
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 501 FW-GLSTLLDFMRDPQIIWT*YMEL*REYGMCPSFTNLLSAE 623
FW G T++ ++D I Y E+ R+YG P F N+ + E
Sbjct: 327 FWPGTLTMVGDVQDASRIMLTYSEVIRKYGFPPEFYNIHNEE 368
>U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical
protein F55C12.1a protein.
Length = 454
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +1
Query: 220 IHNNVEYHENEVRNFSEPTLKNMPQQNV*ILETSFQKQKQETLQRKDASTVHATICSLWT 399
I N +E EN++ ++ ++ M ++ + LE F+K K+E Q D+S+ + +L T
Sbjct: 162 IRNELEKTENKLEE-AQLLVEGMEEERI-QLERQFRKFKEEAQQDIDSSSEMVEVLALET 219
Query: 400 ACLVLKV 420
L KV
Sbjct: 220 EELRRKV 226
>U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical
protein F55C12.1c protein.
Length = 416
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +1
Query: 220 IHNNVEYHENEVRNFSEPTLKNMPQQNV*ILETSFQKQKQETLQRKDASTVHATICSLWT 399
I N +E EN++ ++ ++ M ++ + LE F+K K+E Q D+S+ + +L T
Sbjct: 124 IRNELEKTENKLEE-AQLLVEGMEEERI-QLERQFRKFKEEAQQDIDSSSEMVEVLALET 181
Query: 400 ACLVLKV 420
L KV
Sbjct: 182 EELRRKV 188
>U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical
protein F55C12.1b protein.
Length = 471
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +1
Query: 220 IHNNVEYHENEVRNFSEPTLKNMPQQNV*ILETSFQKQKQETLQRKDASTVHATICSLWT 399
I N +E EN++ ++ ++ M ++ + LE F+K K+E Q D+S+ + +L T
Sbjct: 179 IRNELEKTENKLEE-AQLLVEGMEEERI-QLERQFRKFKEEAQQDIDSSSEMVEVLALET 236
Query: 400 ACLVLKV 420
L KV
Sbjct: 237 EELRRKV 243
>U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical
protein F55C12.1d protein.
Length = 468
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +1
Query: 220 IHNNVEYHENEVRNFSEPTLKNMPQQNV*ILETSFQKQKQETLQRKDASTVHATICSLWT 399
I N +E EN++ ++ ++ M ++ + LE F+K K+E Q D+S+ + +L T
Sbjct: 176 IRNELEKTENKLEE-AQLLVEGMEEERI-QLERQFRKFKEEAQQDIDSSSEMVEVLALET 233
Query: 400 ACLVLKV 420
L KV
Sbjct: 234 EELRRKV 240
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/57 (21%), Positives = 24/57 (42%)
Frame = +1
Query: 103 DNLPSVMMAVFIEQATPFLEDFLDQVIDTDYPKNKIHLFIHNNVEYHENEVRNFSEP 273
D + + V +++ P LEDF+ + P ++ N H N + + +P
Sbjct: 199 DPMQCMSSPVELDEICPTLEDFMSSAASSSTPSTSSAPQMNQNQNTHPNSINHHHQP 255
>AF022978-3|AAG24182.2| 403|Caenorhabditis elegans Hypothetical
protein T01G6.6 protein.
Length = 403
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 187 TDYPKNKIHLFIHNNVEYHENEV 255
TDYP +I F+ N+ ++ NEV
Sbjct: 272 TDYPNEQIQFFLENSDDWVHNEV 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,335,754
Number of Sequences: 27780
Number of extensions: 284018
Number of successful extensions: 839
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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