Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30128
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    50   6e-08
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   2.6  
AY146724-1|AAO12084.1|  151|Anopheles gambiae odorant-binding pr...    23   6.0  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   6.0  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   7.9  

>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 50.0 bits (114), Expect = 6e-08
 Identities = 20/56 (35%), Positives = 36/56 (64%)
 Frame = +1

Query: 1   DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDW 168
           D   R ++WTD+ +  +EV++L+  +R  L   +++  PRGIA+  + G +FW+DW
Sbjct: 128 DSIGRKLYWTDAGRKVLEVSDLEEGIRSALVW-KDLEQPRGIALDYESGYLFWSDW 182



 Score = 23.8 bits (49), Expect = 4.5
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +3

Query: 252 SNSVAIDWSR--DRVCFADAGLQVIKCIDLHSRQIETI-AENCRYPFGLAIN--GDKLYW 416
           SN V +D  R    + +AD    VI        +I+ I +E+     GL I+  G KLYW
Sbjct: 77  SNVVTLDVDRRTGEIYWADTIEDVIMRSTPDGMRIKQIYSESMTSVDGLVIDSIGRKLYW 136

Query: 417 SDWRTLKIEIID 452
           +D     +E+ D
Sbjct: 137 TDAGRKVLEVSD 148


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -1

Query: 244 HLGYRGGLIFPCRPCSPTRS*DCFDSSQSR 155
           H   RGG   PC PC   +  +  DS   R
Sbjct: 713 HNPARGGPFMPCVPCDCNKHAEICDSETGR 742


>AY146724-1|AAO12084.1|  151|Anopheles gambiae odorant-binding
           protein AgamOBP18 protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 330 DLHSRQIETIAENCRYPFGLAIN 398
           D   +QIE + EN R PF L ++
Sbjct: 96  DAAVKQIEILPENYRQPFRLGLD 118


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 500 TVIGVANAPSECPGAANVCSQRNGNCNAGQ 589
           TV+G   A ++ PGA  + S  +G+ N+ +
Sbjct: 56  TVLGGHRANAKLPGAGPIVSSSSGSGNSSK 85


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = -1

Query: 538 GTLARRVGNTYNRIVDLGMSICPLAWVIVSMISIFNVLQSLQYN 407
           G  +   G  YN +   GM+I   AW +    S     + LQ N
Sbjct: 447 GIFSMYTGFVYNDVFSKGMNIFGSAWSVNYNTSTVMTNKELQLN 490


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,830
Number of Sequences: 2352
Number of extensions: 14043
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)