Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30128
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 99 3e-21
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 99 3e-21
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 71 5e-13
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 64 6e-11
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 64 6e-11
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 64 8e-11
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 62 4e-10
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 48 4e-06
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 48 4e-06
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 48 4e-06
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 48 4e-06
Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z68296-6|CAE17754.1| 195|Caenorhabditis elegans Hypothetical pr... 31 0.51
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 30 1.6
U97001-6|AAB52257.2| 374|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z48795-6|CAA88730.1| 203|Caenorhabditis elegans Hypothetical pr... 28 6.3
U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm recept... 28 6.3
U64608-9|AAX88815.1| 319|Caenorhabditis elegans Egg laying defe... 28 6.3
U64608-8|AAO91671.1| 316|Caenorhabditis elegans Egg laying defe... 28 6.3
U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying defe... 28 6.3
U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying defe... 28 6.3
AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain pr... 28 6.3
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 27 8.3
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 98.7 bits (235), Expect = 3e-21
Identities = 46/91 (50%), Positives = 61/91 (67%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DW RN++W DS TIEVANL+ ++ L QN+S PRGIAV P++G +FWTDW + N
Sbjct: 1563 DWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNVSQPRGIAVDPRKGVMFWTDWGQ-N 1621
Query: 181 PKIEWANMDGTERSVLLGSPDVKLPTLWPST 273
P IE A+MDGT+R ++ VK WP+T
Sbjct: 1622 PCIERASMDGTDRQII-----VKTKIYWPNT 1647
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +1
Query: 1 DWSARNIFWT--DSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNR 174
DW N+++ D+++ IEV+ LD RK+L + + P IAV P ++W D +
Sbjct: 2211 DWINYNMYFINHDAERTNIEVSKLDGTYRKILLTTKT-ETPSSIAVDPVSRYLYWADQGQ 2269
Query: 175 SNPKIEWANMDGTERSVLLGS 237
P I+ + +DG+ R V++ S
Sbjct: 2270 -KPTIQRSFLDGSRREVIVSS 2289
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +1
Query: 19 IFWTDSKKLT--------IEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNR 174
+FW+DS T IE +NL RKV+ S ++IS P IAV + KI+W D NR
Sbjct: 2584 LFWSDSGYKTSGGLYEPRIERSNLAGGSRKVIVS-ESISLPAAIAVDFRNQKIYWADVNR 2642
Query: 175 SNPKIEWANMDGTERSVLLGSPDVKLPTLW 264
N IE A+ DG R V+ K +W
Sbjct: 2643 LN--IEVADYDGQNRKVIASGYRAKSLDIW 2670
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DW R ++ + ++ +I V LD + K L I P+ I VHP +G +F+T+W+
Sbjct: 3398 DWVGRKLYMLNRQERSIRVCELDGRFCKTLIR-DRIQQPKAIVVHPGKGYLFFTEWS-LQ 3455
Query: 181 PKIEWANMDGT 213
P I +DG+
Sbjct: 3456 PYIGRIALDGS 3466
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/79 (32%), Positives = 44/79 (55%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DW ++ +S I+V++ D + R VL + ++ P IA+ P RG++F+T +
Sbjct: 479 DWITNTLYIIESGSRRIDVSSYDGERRTVLLA-DGLTLPLDIALDPLRGEMFFT----NQ 533
Query: 181 PKIEWANMDGTERSVLLGS 237
K+E A MDGT R L+ +
Sbjct: 534 LKLEAAAMDGTNRRTLVNT 552
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLH-SRQIETIAEN--CRYPFGLAINGDKLYWSDW 425
N++A+D++ DRV FAD+ L I ++ S + + +A + ++P LAI D +Y+SD
Sbjct: 1646 NTIALDYTTDRVYFADSKLDFIDFVNYDGSGRTQVLASSKFVQHPHALAIFEDMMYYSDR 1705
Query: 426 RTLKIEI 446
R K+++
Sbjct: 1706 RLQKLQV 1712
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETIAENCR---YPFGLAINGDKLYWSDW 425
+ + +D + RV + D + ++ ID +A+ +PFGLA+ LYW+DW
Sbjct: 558 SGIVVDITAKRVYWVDPKVDRLESIDYQGNDRRIVAQGMNVVPHPFGLALFDQYLYWTDW 617
Query: 426 RTLKI 440
L +
Sbjct: 618 TRLGV 622
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETI-AENCRYPFGLAINGDKLYWSDWRT 431
N++AID+ DR+ + DA L I +D I A+ + + + D LYW+DW
Sbjct: 3485 NAIAIDYFSDRLFWGDAHLNEIGFMDFDGNGRRHIPAQRTSHVSSMVVFDDYLYWADWNL 3544
Query: 432 LKI 440
++
Sbjct: 3545 REV 3547
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNI-SNPRGIAVHPQRGKIFWTDWNR 174
D +A+ ++W D K +E + R+++ N+ +P G+A+ Q ++WTDW R
Sbjct: 563 DITAKRVYWVDPKVDRLESIDYQGNDRRIVAQGMNVVPHPFGLALFDQY--LYWTDWTR 619
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Frame = +3
Query: 276 SRDRVCFADAGLQV-IKCIDLHSRQIETIAENCRY-PFGLAIN---GDKLYWSDWRTLKI 440
S R+C++DAGL I+C D+ + I ++ + P +AI+ G+++YW D + ++
Sbjct: 4341 SAGRICYSDAGLHAKIECADMDGTHRQIIVKDLVFSPTSMAIDEGKGNRIYWVDPKYRRV 4400
Query: 441 EIID 452
+ ++
Sbjct: 4401 DAVN 4404
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETIAENCRYPFGLAINGDKLYWSDWRTL 434
+ +AID++ +R+C+ D L+ I C+D + + + + P + I + +Y+ R
Sbjct: 894 SEMAIDFAENRLCWGDTLLKTISCMDFDGKNVVKLDIDNPIPVAITIMNEYIYYVHQRPY 953
Query: 435 KI 440
I
Sbjct: 954 SI 955
Score = 35.1 bits (77), Expect = 0.041
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTK-VRKVLFSVQN----ISNPRGIAVHPQRGKIFWTD 165
DW+ RN+ + TIE+ K R V+ S + P IAV +G +FW D
Sbjct: 1890 DWNGRNLVVGNKITQTIEIIRTQGKQYRSVILSNDQSPTAVVTPVAIAVDADKGYVFWLD 1949
Query: 166 --WNRSNPKIEWANMDGTERSVL 228
++ K+ A +DG+ V+
Sbjct: 1950 RGGGAADAKVARAGLDGSNPLVI 1972
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 261 VAIDWSRDRVCFADAGLQVIKCIDLHSRQIE-TIAENCRYPFGLAINGDKLYWSDWRTLK 437
+AID + RV F++A I + + +++ R P GLA GD+L+++D
Sbjct: 1983 IAIDTTNTRVYFSEAKAGRISSVTYDGQDRHYVLSDGGRQPNGLAFYGDRLFYADSAFDS 2042
Query: 438 IEI 446
IE+
Sbjct: 2043 IEV 2045
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFS 96
D+ + I+W D +L IEVA+ D + RKV+ S
Sbjct: 2629 DFRNQKIYWADVNRLNIEVADYDGQNRKVIAS 2660
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 103 NISNPRGIAVHPQRGKIFWTDWNRSNPKIEWANMDGTERSVLL 231
++ P + P G+I ++D + KIE A+MDGT R +++
Sbjct: 4329 HLQQPTALITAPSAGRICYSDAGL-HAKIECADMDGTHRQIIV 4370
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 339 SRQIETIAENCRYPFGLAIN--GDKLYWSDWRTLKIEIIDTITQAR 470
SR++ ++E+ P +A++ K+YW+D L IE+ D Q R
Sbjct: 2611 SRKV-IVSESISLPAAIAVDFRNQKIYWADVNRLNIEVADYDGQNR 2655
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 98.7 bits (235), Expect = 3e-21
Identities = 46/91 (50%), Positives = 61/91 (67%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DW RN++W DS TIEVANL+ ++ L QN+S PRGIAV P++G +FWTDW + N
Sbjct: 1563 DWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNVSQPRGIAVDPRKGVMFWTDWGQ-N 1621
Query: 181 PKIEWANMDGTERSVLLGSPDVKLPTLWPST 273
P IE A+MDGT+R ++ VK WP+T
Sbjct: 1622 PCIERASMDGTDRQII-----VKTKIYWPNT 1647
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +1
Query: 1 DWSARNIFWT--DSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNR 174
DW N+++ D+++ IEV+ LD RK+L + + P IAV P ++W D +
Sbjct: 2211 DWINYNMYFINHDAERTNIEVSKLDGTYRKILLTTKT-ETPSSIAVDPVSRYLYWADQGQ 2269
Query: 175 SNPKIEWANMDGTERSVLLGS 237
P I+ + +DG+ R V++ S
Sbjct: 2270 -KPTIQRSFLDGSRREVIVSS 2289
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +1
Query: 19 IFWTDSKKLT--------IEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNR 174
+FW+DS T IE +NL RKV+ S ++IS P IAV + KI+W D NR
Sbjct: 2584 LFWSDSGYKTSGGLYEPRIERSNLAGGSRKVIVS-ESISLPAAIAVDFRNQKIYWADVNR 2642
Query: 175 SNPKIEWANMDGTERSVLLGSPDVKLPTLW 264
N IE A+ DG R V+ K +W
Sbjct: 2643 LN--IEVADYDGQNRKVIASGYRAKSLDIW 2670
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DW R ++ + ++ +I V LD + K L I P+ I VHP +G +F+T+W+
Sbjct: 3398 DWVGRKLYMLNRQERSIRVCELDGRFCKTLIR-DRIQQPKAIVVHPGKGYLFFTEWS-LQ 3455
Query: 181 PKIEWANMDGT 213
P I +DG+
Sbjct: 3456 PYIGRIALDGS 3466
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/79 (32%), Positives = 44/79 (55%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DW ++ +S I+V++ D + R VL + ++ P IA+ P RG++F+T +
Sbjct: 479 DWITNTLYIIESGSRRIDVSSYDGERRTVLLA-DGLTLPLDIALDPLRGEMFFT----NQ 533
Query: 181 PKIEWANMDGTERSVLLGS 237
K+E A MDGT R L+ +
Sbjct: 534 LKLEAAAMDGTNRRTLVNT 552
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLH-SRQIETIAEN--CRYPFGLAINGDKLYWSDW 425
N++A+D++ DRV FAD+ L I ++ S + + +A + ++P LAI D +Y+SD
Sbjct: 1646 NTIALDYTTDRVYFADSKLDFIDFVNYDGSGRTQVLASSKFVQHPHALAIFEDMMYYSDR 1705
Query: 426 RTLKIEI 446
R K+++
Sbjct: 1706 RLQKLQV 1712
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETIAENCR---YPFGLAINGDKLYWSDW 425
+ + +D + RV + D + ++ ID +A+ +PFGLA+ LYW+DW
Sbjct: 558 SGIVVDITAKRVYWVDPKVDRLESIDYQGNDRRIVAQGMNVVPHPFGLALFDQYLYWTDW 617
Query: 426 RTLKI 440
L +
Sbjct: 618 TRLGV 622
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETI-AENCRYPFGLAINGDKLYWSDWRT 431
N++AID+ DR+ + DA L I +D I A+ + + + D LYW+DW
Sbjct: 3485 NAIAIDYFSDRLFWGDAHLNEIGFMDFDGNGRRHIPAQRTSHVSSMVVFDDYLYWADWNL 3544
Query: 432 LKI 440
++
Sbjct: 3545 REV 3547
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNI-SNPRGIAVHPQRGKIFWTDWNR 174
D +A+ ++W D K +E + R+++ N+ +P G+A+ Q ++WTDW R
Sbjct: 563 DITAKRVYWVDPKVDRLESIDYQGNDRRIVAQGMNVVPHPFGLALFDQY--LYWTDWTR 619
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Frame = +3
Query: 276 SRDRVCFADAGLQV-IKCIDLHSRQIETIAENCRY-PFGLAIN---GDKLYWSDWRTLKI 440
S R+C++DAGL I+C D+ + I ++ + P +AI+ G+++YW D + ++
Sbjct: 4341 SAGRICYSDAGLHAKIECADMDGTHRQIIVKDLVFSPTSMAIDEGKGNRIYWVDPKYRRV 4400
Query: 441 EIID 452
+ ++
Sbjct: 4401 DAVN 4404
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETIAENCRYPFGLAINGDKLYWSDWRTL 434
+ +AID++ +R+C+ D L+ I C+D + + + + P + I + +Y+ R
Sbjct: 894 SEMAIDFAENRLCWGDTLLKTISCMDFDGKNVVKLDIDNPIPVAITIMNEYIYYVHQRPY 953
Query: 435 KI 440
I
Sbjct: 954 SI 955
Score = 35.1 bits (77), Expect = 0.041
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTK-VRKVLFSVQN----ISNPRGIAVHPQRGKIFWTD 165
DW+ RN+ + TIE+ K R V+ S + P IAV +G +FW D
Sbjct: 1890 DWNGRNLVVGNKITQTIEIIRTQGKQYRSVILSNDQSPTAVVTPVAIAVDADKGYVFWLD 1949
Query: 166 --WNRSNPKIEWANMDGTERSVL 228
++ K+ A +DG+ V+
Sbjct: 1950 RGGGAADAKVARAGLDGSNPLVI 1972
Score = 32.7 bits (71), Expect = 0.22
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 261 VAIDWSRDRVCFADAGLQVIKCIDLHSRQIE-TIAENCRYPFGLAINGDKLYWSDWRTLK 437
+AID + RV F++A I + + +++ R P GLA GD+L+++D
Sbjct: 1983 IAIDTTNTRVYFSEAKAGRISSVTYDGQDRHYVLSDGGRQPNGLAFYGDRLFYADSAFDS 2042
Query: 438 IEI 446
IE+
Sbjct: 2043 IEV 2045
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFS 96
D+ + I+W D +L IEVA+ D + RKV+ S
Sbjct: 2629 DFRNQKIYWADVNRLNIEVADYDGQNRKVIAS 2660
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 103 NISNPRGIAVHPQRGKIFWTDWNRSNPKIEWANMDGTERSVLL 231
++ P + P G+I ++D + KIE A+MDGT R +++
Sbjct: 4329 HLQQPTALITAPSAGRICYSDAGL-HAKIECADMDGTHRQIIV 4370
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 339 SRQIETIAENCRYPFGLAIN--GDKLYWSDWRTLKIEIIDTITQAR 470
SR++ ++E+ P +A++ K+YW+D L IE+ D Q R
Sbjct: 2611 SRKV-IVSESISLPAAIAVDFRNQKIYWADVNRLNIEVADYDGQNR 2655
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 71.3 bits (167), Expect = 5e-13
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DW + NI+W DS TI+V + D R + + QN+ N R +A+ + G +FWTDW SN
Sbjct: 1437 DWISGNIYWIDSFLDTIQVVSEDGTKRATVIN-QNMGNARSLAIDVEEGFMFWTDWEESN 1495
Query: 181 PKIEWANMDGTERSVL 228
P+IE A++ G R+++
Sbjct: 1496 PRIERASLAGNNRAII 1511
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDT-KVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRS 177
D+++ N++ TD ++ I V L ++KV+ S N+SNPR IA+H + +FW WN
Sbjct: 679 DFTSDNLYMTDQRRKIITVQRLSNLSIQKVVVS-GNMSNPRAIAIHIAKSYLFWGSWNED 737
Query: 178 N-------PKIEWANMDGTERSVLL 231
N IE + +DG+ER L+
Sbjct: 738 NNDDEKIPAMIERSKLDGSERKTLV 762
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLH-SRQIETIAENCRYPFG----LAINGDKLYWS 419
+++AID +R R+CF D+ + C+D + + + +A P G L NGD++Y+
Sbjct: 2157 SAIAIDENRSRLCFVDSEKAAVDCVDYNGNNEQRNVAMFKAQPMGDIVSLVFNGDEMYFF 2216
Query: 420 DWRTLKIEIIDTITQARGQIDIPRSTIRL 506
D I+ + Q G + + S +++
Sbjct: 2217 DKFNSSGSIVRGLVQQDGSVVLKDSLVKV 2245
Score = 34.7 bits (76), Expect = 0.055
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETI---AENCRYPFGLAINGDKLYWSDW 425
N +A+D RV +ADA I I R + E + FG+ + +Y+SDW
Sbjct: 1524 NGIALDTIAKRVYWADAKSDSIHTITYDGRDHVIVFRDPERLGHCFGIDVYEGHVYFSDW 1583
Query: 426 RTLKIEIID 452
RT I +D
Sbjct: 1584 RTNTISKVD 1592
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLF-SVQNISNPRGIAVHPQRGKIFWTDWNRS 177
D A+ ++W D+K +I D + ++F + + + GI V+ G ++++DW R+
Sbjct: 1529 DTIAKRVYWADAKSDSIHTITYDGRDHVIVFRDPERLGHCFGIDVY--EGHVYFSDW-RT 1585
Query: 178 N 180
N
Sbjct: 1586 N 1586
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +1
Query: 16 NIFWTDSKKLTIEVANLDTKV---RKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSNPK 186
+I+WTD I +D + ++ + S + N GIAV G I+W D
Sbjct: 1396 SIYWTDLSADKIYTGLVDQRTILYQRTIVSY-GVFNAEGIAVDWISGNIYWID--SFLDT 1452
Query: 187 IEWANMDGTERSVLL 231
I+ + DGT+R+ ++
Sbjct: 1453 IQVVSEDGTKRATVI 1467
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Frame = +3
Query: 261 VAIDWSRDRVCFADA-GLQVIKCIDLHSRQIETIAENCR----YPFGLAINGDKLYWSDW 425
+ ID +++ F+D+ ++ +C D E + N +PF L+I D++ ++DW
Sbjct: 2492 LTIDLDSEKLYFSDSKDFKISRC-DFDGSHRELVVSNTDIPSIHPFELSIYDDEIIFTDW 2550
Query: 426 RTLKIEIIDTITQARGQIDIPRST---IRL*VLPTRR 527
+ ++ IT + + +I R+T + L V+ T+R
Sbjct: 2551 VRRSVVGVNKITGSDNR-NINRATDVPVGLVVVDTKR 2586
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 115 PRGIAVHPQRGKIFWTDWNRSNPKIEWANMDGTERSVLLGSPDV 246
P IAV P +GK+FW S+ I+ +N GTE ++ +
Sbjct: 2117 PYEIAVDPPKGKLFWA----SSSCIKSSNYYGTEAKCIVSKSSI 2156
Score = 27.5 bits (58), Expect = 8.3
Identities = 20/94 (21%), Positives = 43/94 (45%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
D + ++++DSK I + D R+++ S +I + + +I +TDW R +
Sbjct: 2495 DLDSEKLYFSDSKDFKISRCDFDGSHRELVVSNTDIPSIHPFELSIYDDEIIFTDWVRRS 2554
Query: 181 PKIEWANMDGTERSVLLGSPDVKLPTLWPSTGRE 282
+ + G++ + + DV + + T RE
Sbjct: 2555 -VVGVNKITGSDNRNINRATDVPVGLVVVDTKRE 2587
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 64.5 bits (150), Expect = 6e-11
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DW +FWTD I V ++ ++VL+S ++ PR IAV P+ G IFWTDW +
Sbjct: 577 DWVHDLLFWTDGGLDQINVLDMKNGKQRVLYS-SDLEEPRAIAVDPEVGLIFWTDWGK-K 634
Query: 181 PKIEWANMDGTERSVLLGSPDVKLP 255
+IE + MDG R+V++ V P
Sbjct: 635 ARIERSGMDGQHRTVIVEGDRVVWP 659
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +3
Query: 186 DRVGEHGRHGKISPPR*PRCEASNSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETIAE 365
+R G G+H + R N +A+D+ RV +ADA ++ I D + I+T+
Sbjct: 638 ERSGMDGQHRTVIVEG-DRVVWPNGLALDYVDKRVYWADAKIKSIFSCDYWGKNIKTVLH 696
Query: 366 N---CRYPFGLAINGDKLYWSDWRTLKIEIIDTITQA 467
+ R+PF +A+ D+L+++DW + ++ T A
Sbjct: 697 SHQYLRHPFSMAVFEDRLFYTDWEHDGVITVNKFTGA 733
Score = 35.5 bits (78), Expect = 0.031
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 19 IFWTD-SKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTD 165
IFWTD KK IE + +D + R V+ + P G+A+ +++W D
Sbjct: 626 IFWTDWGKKARIERSGMDGQHRTVIVEGDRVVWPNGLALDYVDKRVYWAD 675
Score = 35.1 bits (77), Expect = 0.041
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDL-HSRQIETIAENCRYPFGLAINGD--KLYWSDW 425
+ +A+DW D + + D GL I +D+ + +Q + + P +A++ + ++W+DW
Sbjct: 572 DGLAVDWVHDLLFWTDGGLDQINVLDMKNGKQRVLYSSDLEEPRAIAVDPEVGLIFWTDW 631
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 64.5 bits (150), Expect = 6e-11
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DW +FWTD I V ++ ++VL+S ++ PR IAV P+ G IFWTDW +
Sbjct: 579 DWVHDLLFWTDGGLDQINVLDMKNGKQRVLYS-SDLEEPRAIAVDPEVGLIFWTDWGK-K 636
Query: 181 PKIEWANMDGTERSVLLGSPDVKLP 255
+IE + MDG R+V++ V P
Sbjct: 637 ARIERSGMDGQHRTVIVEGDRVVWP 661
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +3
Query: 186 DRVGEHGRHGKISPPR*PRCEASNSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETIAE 365
+R G G+H + R N +A+D+ RV +ADA ++ I D + I+T+
Sbjct: 640 ERSGMDGQHRTVIVEG-DRVVWPNGLALDYVDKRVYWADAKIKSIFSCDYWGKNIKTVLH 698
Query: 366 N---CRYPFGLAINGDKLYWSDWRTLKIEIIDTITQA 467
+ R+PF +A+ D+L+++DW + ++ T A
Sbjct: 699 SHQYLRHPFSMAVFEDRLFYTDWEHDGVITVNKFTGA 735
Score = 35.5 bits (78), Expect = 0.031
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 19 IFWTD-SKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTD 165
IFWTD KK IE + +D + R V+ + P G+A+ +++W D
Sbjct: 628 IFWTDWGKKARIERSGMDGQHRTVIVEGDRVVWPNGLALDYVDKRVYWAD 677
Score = 35.1 bits (77), Expect = 0.041
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDL-HSRQIETIAENCRYPFGLAINGD--KLYWSDW 425
+ +A+DW D + + D GL I +D+ + +Q + + P +A++ + ++W+DW
Sbjct: 574 DGLAVDWVHDLLFWTDGGLDQINVLDMKNGKQRVLYSSDLEEPRAIAVDPEVGLIFWTDW 633
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 64.1 bits (149), Expect = 8e-11
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DWS+RN+++ DS I VA+L+ K +K L + + + NPR + + ++++DW+R N
Sbjct: 1368 DWSSRNVYYADSMNDEIGVASLNGKFKKSLVT-EGLVNPRSVVLDLYGRHLYYSDWHREN 1426
Query: 181 PKIEWANMDGTERSVLLGSPDVKLP 255
P I +MDG V L + DV LP
Sbjct: 1427 PYIGRVDMDGKNNRVFL-NEDVHLP 1450
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETIAENCRYPFGLAINGD-KLYWSDWRT 431
N + I +R +C+ DAG + CI + T+ + +YPFGL + + K YW+DW+
Sbjct: 1451 NGLTILPNRRELCWVDAGNHRLSCIQYNGAGRRTVFSSLQYPFGLTHDEEQKFYWTDWKD 1510
Query: 432 LKIEII 449
+I +
Sbjct: 1511 NRIHSV 1516
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +2
Query: 503 VIGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSXGXSC 625
V G+ P C G + CS+ NG C LCLP G G C
Sbjct: 1536 VFGILAVPKSCVGPSTPCSEDNGGCQ--HLCLP-GQNGAVC 1573
Score = 30.7 bits (66), Expect = 0.89
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 13 RNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDW 168
R + W D+ + + R+ +FS ++ P G+ H + K +WTDW
Sbjct: 1460 RELCWVDAGNHRLSCIQYNGAGRRTVFS--SLQYPFGLT-HDEEQKFYWTDW 1508
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 261 VAIDWSRDRVCFADAGLQVIKCIDLHSR-QIETIAENCRYPFGLAIN--GDKLYWSDW 425
+A+DWS V +AD+ I L+ + + + E P + ++ G LY+SDW
Sbjct: 1365 IAVDWSSRNVYYADSMNDEIGVASLNGKFKKSLVTEGLVNPRSVVLDLYGRHLYYSDW 1422
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 61.7 bits (143), Expect = 4e-10
Identities = 28/85 (32%), Positives = 45/85 (52%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DW RNI++TD I V ++ + ++L +++PR I + P + +FWTDW S
Sbjct: 581 DWLGRNIYYTDRNHDAIAVCDMRGRFNRILLKGTPLNDPRAIVLDPLQALVFWTDWGAS- 639
Query: 181 PKIEWANMDGTERSVLLGSPDVKLP 255
I NMDG+ V+L ++ P
Sbjct: 640 AHIGRMNMDGSNEQVILQDRTIRWP 664
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVI-KCIDLHSRQIETIAENCRYPFGLAINGDKLYWSDWRT 431
N++A+D R+ F DA I C S++ + + R+ F LA+ D +YWSDW
Sbjct: 665 NALAVDAPAQRLYFGDAHRDYIASCNYDGSKRRMVLRGSVRHIFALAVFEDYVYWSDWHN 724
Query: 432 LKIEIIDTIT 461
IE + IT
Sbjct: 725 HTIERVHKIT 734
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 1 DWSARNIFWTD---SKKLTIEVANLDTKV-RKVLFSVQNISNPRGIAVHPQRGKIFWTDW 168
DW N+F+T S I + + R+V+ + + RG+ VHP RG I W D
Sbjct: 475 DWIGGNVFFTQKSPSPSAGISICTMSGMFCRRVIEGKEQGQSYRGLVVHPMRGLIIWIDS 534
Query: 169 NRSNPKIEWANMDGTERSVLL 231
+ +I ANMDG++ +LL
Sbjct: 535 YQKYHRIMMANMDGSQVRILL 555
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/71 (28%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 240 RCEASNSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETIAEN-CRYPFGLAINGDKLYW 416
+ E +++AID+ R V F D Q+I+ +++ +++ + N +P+ +A LYW
Sbjct: 558 KLEVPSALAIDYIRHDVYFGDVERQLIERVNIDTKERRVVISNGVHHPYDMAYFNGFLYW 617
Query: 417 SDW--RTLKIE 443
+DW +LK++
Sbjct: 618 ADWGSESLKVQ 628
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
D+ ++++ D ++ IE N+DTK R+V+ S + +P +A G ++W DW +
Sbjct: 568 DYIRHDVYFGDVERQLIERVNIDTKERRVVIS-NGVHHPYDMAYF--NGFLYWADWGSES 624
Query: 181 PKIE 192
K++
Sbjct: 625 LKVQ 628
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 1 DWSARNIFWTD---SKKLTIEVANLDTKV-RKVLFSVQNISNPRGIAVHPQRGKIFWTDW 168
DW N+F+T S I + + R+V+ + + RG+ VHP RG I W D
Sbjct: 475 DWIGGNVFFTQKSPSPSAGISICTMSGMFCRRVIEGKEQGQSYRGLVVHPMRGLIIWIDS 534
Query: 169 NRSNPKIEWANMDGTERSVLL 231
+ +I ANMDG++ +LL
Sbjct: 535 YQKYHRIMMANMDGSQVRILL 555
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/71 (28%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 240 RCEASNSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETIAEN-CRYPFGLAINGDKLYW 416
+ E +++AID+ R V F D Q+I+ +++ +++ + N +P+ +A LYW
Sbjct: 558 KLEVPSALAIDYIRHDVYFGDVERQLIERVNIDTKERRVVISNGVHHPYDMAYFNGFLYW 617
Query: 417 SDW--RTLKIE 443
+DW +LK++
Sbjct: 618 ADWGSESLKVQ 628
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
D+ ++++ D ++ IE N+DTK R+V+ S + +P +A G ++W DW +
Sbjct: 568 DYIRHDVYFGDVERQLIERVNIDTKERRVVIS-NGVHHPYDMAYF--NGFLYWADWGSES 624
Query: 181 PKIE 192
K++
Sbjct: 625 LKVQ 628
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 1 DWSARNIFWTD---SKKLTIEVANLDTKV-RKVLFSVQNISNPRGIAVHPQRGKIFWTDW 168
DW N+F+T S I + + R+V+ + + RG+ VHP RG I W D
Sbjct: 475 DWIGGNVFFTQKSPSPSAGISICTMSGMFCRRVIEGKEQGQSYRGLVVHPMRGLIIWIDS 534
Query: 169 NRSNPKIEWANMDGTERSVLL 231
+ +I ANMDG++ +LL
Sbjct: 535 YQKYHRIMMANMDGSQVRILL 555
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/71 (28%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 240 RCEASNSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETIAEN-CRYPFGLAINGDKLYW 416
+ E +++AID+ R V F D Q+I+ +++ +++ + N +P+ +A LYW
Sbjct: 558 KLEVPSALAIDYIRHDVYFGDVERQLIERVNIDTKERRVVISNGVHHPYDMAYFNGFLYW 617
Query: 417 SDW--RTLKIE 443
+DW +LK++
Sbjct: 618 ADWGSESLKVQ 628
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
D+ ++++ D ++ IE N+DTK R+V+ S + +P +A G ++W DW +
Sbjct: 568 DYIRHDVYFGDVERQLIERVNIDTKERRVVIS-NGVHHPYDMAYF--NGFLYWADWGSES 624
Query: 181 PKIE 192
K++
Sbjct: 625 LKVQ 628
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 1 DWSARNIFWTD---SKKLTIEVANLDTKV-RKVLFSVQNISNPRGIAVHPQRGKIFWTDW 168
DW N+F+T S I + + R+V+ + + RG+ VHP RG I W D
Sbjct: 475 DWIGGNVFFTQKSPSPSAGISICTMSGMFCRRVIEGKEQGQSYRGLVVHPMRGLIIWIDS 534
Query: 169 NRSNPKIEWANMDGTERSVLL 231
+ +I ANMDG++ +LL
Sbjct: 535 YQKYHRIMMANMDGSQVRILL 555
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/71 (28%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 240 RCEASNSVAIDWSRDRVCFADAGLQVIKCIDLHSRQIETIAEN-CRYPFGLAINGDKLYW 416
+ E +++AID+ R V F D Q+I+ +++ +++ + N +P+ +A LYW
Sbjct: 558 KLEVPSALAIDYIRHDVYFGDVERQLIERVNIDTKERRVVISNGVHHPYDMAYFNGFLYW 617
Query: 417 SDW--RTLKIE 443
+DW +LK++
Sbjct: 618 ADWGSESLKVQ 628
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
D+ ++++ D ++ IE N+DTK R+V+ S + +P +A G ++W DW +
Sbjct: 568 DYIRHDVYFGDVERQLIERVNIDTKERRVVIS-NGVHHPYDMAYF--NGFLYWADWGSES 624
Query: 181 PKIE 192
K++
Sbjct: 625 LKVQ 628
>Z81078-5|CAB03078.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DW RN++ ++ I V +LD + R+ L+ ++ PR I +HP +G +F TDW+ +N
Sbjct: 401 DWIGRNLY--SLRREDILVQSLDGRFRQPLYK-NVMTLPRSITLHPAKGIMFVTDWS-AN 456
Query: 181 PKIEWANMDGT 213
I A+MDG+
Sbjct: 457 AFIAAASMDGS 467
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLHS---RQIETIAENCRYPFGLAINGDKLYWSDW 425
N+VA+D +++ +ADA L I+ ++ R I A + + FGLAI D LYW+DW
Sbjct: 481 NAVAVDIFAEKIYWADAFLDTIESANMDGTGRRVIIADAGSVPHVFGLAIADDYLYWTDW 540
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFS-VQNISNPRGIAVHPQRGKIFWTDW 168
D A I+W D+ TIE AN+D R+V+ + ++ + G+A+ ++WTDW
Sbjct: 486 DIFAEKIYWADAFLDTIESANMDGTGRRVIIADAGSVPHVFGLAIADD--YLYWTDW 540
Score = 35.1 bits (77), Expect = 0.041
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 19 IFWTD-SKKLTIEVANLD-TKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSNPKIE 192
+F TD S I A++D + RK++ + I+ P +AV KI+W D IE
Sbjct: 448 MFVTDWSANAFIAAASMDGSHFRKII--TERITWPNAVAVDIFAEKIYWADAFLDT--IE 503
Query: 193 WANMDGTERSVLL 231
ANMDGT R V++
Sbjct: 504 SANMDGTGRRVII 516
>Z75535-4|CAA99828.2| 722|Caenorhabditis elegans Hypothetical
protein F14B4.1 protein.
Length = 722
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSN 180
DW RN++ ++ I V +LD + R+ L+ ++ PR I +HP +G +F TDW+ +N
Sbjct: 401 DWIGRNLY--SLRREDILVQSLDGRFRQPLYK-NVMTLPRSITLHPAKGIMFVTDWS-AN 456
Query: 181 PKIEWANMDGT 213
I A+MDG+
Sbjct: 457 AFIAAASMDGS 467
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +3
Query: 255 NSVAIDWSRDRVCFADAGLQVIKCIDLHS---RQIETIAENCRYPFGLAINGDKLYWSDW 425
N+VA+D +++ +ADA L I+ ++ R I A + + FGLAI D LYW+DW
Sbjct: 481 NAVAVDIFAEKIYWADAFLDTIESANMDGTGRRVIIADAGSVPHVFGLAIADDYLYWTDW 540
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 1 DWSARNIFWTDSKKLTIEVANLDTKVRKVLFS-VQNISNPRGIAVHPQRGKIFWTDW 168
D A I+W D+ TIE AN+D R+V+ + ++ + G+A+ ++WTDW
Sbjct: 486 DIFAEKIYWADAFLDTIESANMDGTGRRVIIADAGSVPHVFGLAIADD--YLYWTDW 540
Score = 35.1 bits (77), Expect = 0.041
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 19 IFWTD-SKKLTIEVANLD-TKVRKVLFSVQNISNPRGIAVHPQRGKIFWTDWNRSNPKIE 192
+F TD S I A++D + RK++ + I+ P +AV KI+W D IE
Sbjct: 448 MFVTDWSANAFIAAASMDGSHFRKII--TERITWPNAVAVDIFAEKIYWADAFLDT--IE 503
Query: 193 WANMDGTERSVLL 231
ANMDGT R V++
Sbjct: 504 SANMDGTGRRVII 516
>Z68296-6|CAE17754.1| 195|Caenorhabditis elegans Hypothetical
protein C46C2.6a protein.
Length = 195
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 533 CPGAANVCSQRNGNCNAGQLCLPNGSXGXSCL 628
CP + Q +G C G C+P+ S G C+
Sbjct: 60 CPSDYDFIRQHSGRCADGTACIPDSSFGEPCI 91
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 83 KSCSRYRTFLIRGASPYILKEGKSSGL 163
K C Y+ +IR SP IL++GK+ G+
Sbjct: 551 KMCFAYQPEVIREGSPIILRQGKTKGM 577
>U97001-6|AAB52257.2| 374|Caenorhabditis elegans Hypothetical
protein K08B12.1 protein.
Length = 374
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 615 PXLPLGRHSCPALQLPFLCEQTLAAPGHSLGALATPITVSSILECLFALSPGL 457
P + CP P ++ A G SL A+AT + S++ ECL + P +
Sbjct: 71 PVIQKDAFKCPTPYKPTAGKRYTDALGRSLFAVATAVRDSNVTECLRNVRPDI 123
>Z48795-6|CAA88730.1| 203|Caenorhabditis elegans Hypothetical
protein R05H5.7 protein.
Length = 203
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 461 PGERANRHSKIDDTVIGVANAPSECPGAANVCSQRNGNCNAGQLCLPNGSXGXSC 625
P R N + +I N EC C Q++G C++ QLC+ S G C
Sbjct: 76 PVPRFNSFVNTNSIIISNENGFGECRPHHTNC-QQSGQCSSNQLCI--DSNGYCC 127
>U97000-8|AAC47999.1| 347|Caenorhabditis elegans Seven tm receptor
protein 136 protein.
Length = 347
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 484 MSICPLAWVIVSMISIFNVLQSLQYNLSPLM 392
+SI ++ ISI++ + SL++NLSP M
Sbjct: 214 LSIISFLAILYCAISIYSTINSLRHNLSPKM 244
>U64608-9|AAX88815.1| 319|Caenorhabditis elegans Egg laying
defective protein 13,isoform d protein.
Length = 319
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 622 TXSPTSIG*AQLSGVAVTVSLRANVGSPGTL 530
T SPT+I + LSG + SL N GS G L
Sbjct: 112 TPSPTAIPQSPLSGFRLPYSLGTNYGSDGQL 142
>U64608-8|AAO91671.1| 316|Caenorhabditis elegans Egg laying
defective protein 13,isoform b protein.
Length = 316
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 622 TXSPTSIG*AQLSGVAVTVSLRANVGSPGTL 530
T SPT+I + LSG + SL N GS G L
Sbjct: 109 TPSPTAIPQSPLSGFRLPYSLGTNYGSDGQL 139
>U64608-7|AAX88814.1| 422|Caenorhabditis elegans Egg laying
defective protein 13,isoform c protein.
Length = 422
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 622 TXSPTSIG*AQLSGVAVTVSLRANVGSPGTL 530
T SPT+I + LSG + SL N GS G L
Sbjct: 215 TPSPTAIPQSPLSGFRLPYSLGTNYGSDGQL 245
>U64608-6|AAB04597.2| 470|Caenorhabditis elegans Egg laying
defective protein 13,isoform a protein.
Length = 470
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 622 TXSPTSIG*AQLSGVAVTVSLRANVGSPGTL 530
T SPT+I + LSG + SL N GS G L
Sbjct: 263 TPSPTAIPQSPLSGFRLPYSLGTNYGSDGQL 293
>AF097319-1|AAD12252.1| 470|Caenorhabditis elegans Sox domain
protein COG-2 protein.
Length = 470
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -1
Query: 622 TXSPTSIG*AQLSGVAVTVSLRANVGSPGTL 530
T SPT+I + LSG + SL N GS G L
Sbjct: 263 TPSPTAIPQSPLSGFRLPYSLGTNYGSDGQL 293
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 243 CEASNSVAIDWSRDRVCFA--DAGLQVIKCIDLHSRQIETIAENCR 374
C A+ + SR+ C + D G ++K +D ++ T A NCR
Sbjct: 1434 CPATCGTHVQQSRNVTCVSAEDGGRTILKDVDCDVQKRPTSARNCR 1479
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 243 CEASNSVAIDWSRDRVCFA--DAGLQVIKCIDLHSRQIETIAENCR 374
C A+ + SR+ C + D G ++K +D ++ T A NCR
Sbjct: 1434 CPATCGTHVQQSRNVTCVSAEDGGRTILKDVDCDVQKRPTSARNCR 1479
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,184,705
Number of Sequences: 27780
Number of extensions: 331964
Number of successful extensions: 1109
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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