Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30127
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.6  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.5  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   6.5  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   6.5  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   8.5  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    23   8.5  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = -1

Query: 456 GELTTVTPGAIFTLLMYFSPKKLRISIIELPSVVTQLMGK*AYTARILYWKPL-VTPLIM 280
           GE  T++   + +L ++F    L + II   S+V  L+GK    A IL    + VT +++
Sbjct: 272 GEKVTLSISILISLHVFFL---LVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVL 328

Query: 279 FSTCEQTVPRRQAPFWIRT 223
                     R AP W++T
Sbjct: 329 NVHFRSPQTHRMAP-WVKT 346


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = -1

Query: 456 GELTTVTPGAIFTLLMYFSPKKLRISIIELPSVVTQLMGK*AYTARILYWKPL-VTPLIM 280
           GE  T++   + +L ++F    L + II   S+V  L+GK    A IL    + VT +++
Sbjct: 272 GEKVTLSISILISLHVFFL---LVVEIIPPTSLVVPLLGKYLIFAMILVSISICVTVVVL 328

Query: 279 FSTCEQTVPRRQAPFWIRT 223
                     R AP W++T
Sbjct: 329 NVHFRSPQTHRMAP-WVKT 346


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 14/67 (20%), Positives = 32/67 (47%)
 Frame = +2

Query: 248  RRGTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 427
            R  T    +  M++ + K     +  +  H  +  V  +  +I++IRN+LG+  + + + 
Sbjct: 952  RYSTALRDLTQMMRDIRKSRFSHLHKLTTHMALR-VKHKFTNIMQIRNYLGKLRVNQEEC 1010

Query: 428  APGVTVV 448
               ++VV
Sbjct: 1011 RLSLSVV 1017


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 242 ACRRGTVCSHVENMIKGVTKGFQYKMR 322
           AC    +  HVE  + G   GF+ ++R
Sbjct: 240 ACAEAYLTPHVERYLDGFRSGFRDQLR 266


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 242 ACRRGTVCSHVENMIKGVTKGFQYKMR 322
           AC    +  HVE  + G   GF+ ++R
Sbjct: 240 ACAEAYLTPHVERYLDGFRSGFRDQLR 266


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 378 LRYVTSWVRNTSEG 419
           +RY+ SWV N + G
Sbjct: 84  VRYINSWVHNQTHG 97


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 20/77 (25%), Positives = 33/77 (42%)
 Frame = -1

Query: 567 ELSDILILDCSRLLDESSRAETSSKELPSMISSSFCFGELTTVTPGAIFTLLMYFSPKKL 388
           E   +L LD +RL        T +K + S++   F         P   + L  YF    L
Sbjct: 209 ETMGVLALD-TRLGVLRPEQTTGAKAIISLVQKIFDLMYRLEFEPE--YVLWKYFQTPSL 265

Query: 387 RISIIELPSVVTQLMGK 337
           ++ + EL ++   +MGK
Sbjct: 266 KLLMQELDNLTNLVMGK 282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,376
Number of Sequences: 2352
Number of extensions: 15770
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)