Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30125
(477 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 165 3e-40
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 122 3e-27
UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 115 6e-25
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 112 4e-24
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 102 5e-21
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 100 3e-20
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 95 5e-19
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 95 7e-19
UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 91 2e-17
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 86 3e-16
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 74 1e-12
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 70 3e-11
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 69 4e-11
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 69 7e-11
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 68 1e-10
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 68 1e-10
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 66 4e-10
UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zin... 66 5e-10
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 65 7e-10
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 64 2e-09
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 62 6e-09
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 61 1e-08
UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella... 60 3e-08
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 58 8e-08
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 58 1e-07
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 57 2e-07
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 55 7e-07
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 54 1e-06
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 51 2e-05
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 47 2e-04
UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 47 2e-04
UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 46 4e-04
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 46 4e-04
UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bactero... 42 0.007
UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 41 0.012
UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobact... 36 0.61
UniRef50_Q9AA22 Cluster: Putative uncharacterized protein; n=1; ... 35 0.81
UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;... 34 1.4
UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus carot... 33 3.3
UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococc... 33 3.3
UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10; Chlorob... 33 3.3
UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin... 33 4.3
UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8; Euteleos... 33 4.3
UniRef50_A3EJX7 Cluster: Putative uncharacterized protein; n=1; ... 32 5.7
UniRef50_A7RK59 Cluster: Predicted protein; n=1; Nematostella ve... 32 7.5
UniRef50_UPI0000E1E883 Cluster: PREDICTED: similar to Evin1; n=1... 31 10.0
UniRef50_UPI0000DB6F56 Cluster: PREDICTED: similar to CG6131-PA;... 31 10.0
UniRef50_Q8YEE0 Cluster: OLIGOPEPTIDE TRANSPORT ATP-BINDING PROT... 31 10.0
UniRef50_Q6A6N2 Cluster: 30S ribosomal protein S3; n=27; Bacteri... 31 10.0
UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9; Mycoplas... 31 10.0
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 165 bits (402), Expect = 3e-40
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = +3
Query: 3 QAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 182
QAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHS
Sbjct: 101 QAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS 160
Query: 183 GDPCNDYVNTATRHVLLRQGVLGIRSK 263
GDP N YV+TA RHVLLRQGVLGI+ K
Sbjct: 161 GDPVNYYVDTAVRHVLLRQGVLGIKVK 187
Score = 65.3 bits (152), Expect = 7e-10
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +2
Query: 254 QVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 376
+VKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 185 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 225
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 122 bits (295), Expect = 3e-27
Identities = 56/87 (64%), Positives = 69/87 (79%)
Frame = +3
Query: 3 QAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 182
QAE+L+ KL+ GL +RRA YGVLRF M +GA+G EVV+SGKLR RAKS K+ DG MIHS
Sbjct: 102 QAEALKAKLLSGLPIRRAAYGVLRFAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHS 161
Query: 183 GDPCNDYVNTATRHVLLRQGVLGIRSK 263
G P D+++ A RHVL+RQGVLGI+ K
Sbjct: 162 GQPTRDFIDIAIRHVLMRQGVLGIKVK 188
>UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein -
Ostreococcus tauri
Length = 145
Score = 115 bits (276), Expect = 6e-25
Identities = 53/73 (72%), Positives = 61/73 (83%)
Frame = +3
Query: 45 VRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRH 224
VR ACYGVLR+IMESGA+G EVVVSGKLRGQRAK+MKF DG MI SG+P DY+ + TRH
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 225 VLLRQGVLGIRSK 263
LLRQG +G+R K
Sbjct: 90 ALLRQGTIGMRVK 102
Score = 37.5 bits (83), Expect = 0.15
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 254 QVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 367
+VKIML D +G++GP P PD +++ PK++ +P
Sbjct: 100 RVKIMLDHDPKGRDGPSTPIPDTVVIHTPKEDEDMAKP 137
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 112 bits (269), Expect = 4e-24
Identities = 51/87 (58%), Positives = 65/87 (74%)
Frame = +3
Query: 3 QAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 182
QAESLR+KL+ L VRRA G++R++MESGA+GCEV + GK++GQRAKSM F DG MI S
Sbjct: 152 QAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKS 211
Query: 183 GDPCNDYVNTATRHVLLRQGVLGIRSK 263
G +V+TATRH LR G +G+ K
Sbjct: 212 GTAHKHFVDTATRHCHLRAGTIGVNVK 238
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 102 bits (244), Expect = 5e-21
Identities = 44/85 (51%), Positives = 60/85 (70%)
Frame = +3
Query: 3 QAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 182
Q ESLRYKLI + RRA Y ++RF+M++GARGCEV +SGKLRG RA + K+ +G M+ S
Sbjct: 102 QLESLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAISGKLRGARASTSKYKEGYMVKS 161
Query: 183 GDPCNDYVNTATRHVLLRQGVLGIR 257
GD +V A H+ ++Q +GIR
Sbjct: 162 GDVTKQFVTQAVGHIPMKQATIGIR 186
Score = 33.9 bits (74), Expect = 1.9
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2
Query: 254 QVKIMLPWDQQGKNGPKKPQPDHILVTEPKD 346
+V IML D G +GPK+ QPD I V E KD
Sbjct: 186 RVLIMLAQDPSGISGPKESQPDVIKVHEAKD 216
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 99.5 bits (237), Expect = 3e-20
Identities = 40/87 (45%), Positives = 64/87 (73%)
Frame = +3
Query: 3 QAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 182
Q E++ YKL+ + VR A +++ +++ GA+GCE+++SGKL+ QRAK+MKF G MI +
Sbjct: 114 QVEAMNYKLLKDVPVRLAANYIIKSVIQDGAKGCEIIISGKLKQQRAKTMKFKQGYMICT 173
Query: 183 GDPCNDYVNTATRHVLLRQGVLGIRSK 263
G P NDY++ A RHV +QG++G++ K
Sbjct: 174 GQPKNDYIDVAVRHVFFKQGIMGVKVK 200
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 95.5 bits (227), Expect = 5e-19
Identities = 47/77 (61%), Positives = 55/77 (71%)
Frame = +3
Query: 78 IMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIR 257
+ ESGA+G E +VSGKL+GQRAKS KFVD MIHS D N YV+T+ HVLLRQGVLG +
Sbjct: 80 VQESGAKGYEAMVSGKLQGQRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVLGSK 139
Query: 258 SKSCCRGTSKARTARRS 308
+SC GT A RS
Sbjct: 140 CRSCFPGTQAVTLALRS 156
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 95.1 bits (226), Expect = 7e-19
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +3
Query: 3 QAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 182
QA +R K++GG+ RRA L+ + A+GC+++VSGKL+GQRAKS+KF DG++IHS
Sbjct: 112 QANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSGKLKGQRAKSVKFQDGVLIHS 171
Query: 183 GDPCNDYVNTATRHVLLRQGVLGIR 257
GD DY+NT V +QGV+GI+
Sbjct: 172 GDAVKDYINTGYATVETKQGVIGIQ 196
Score = 39.9 bits (89), Expect = 0.028
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 254 QVKIMLPWDQQGKNGPKKPQPDHILVTEPKD 346
QV+IMLP+D +G GP P PD I + EP +
Sbjct: 196 QVRIMLPYDPEGVLGPNYPLPDRITILEPSE 226
>UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia
ATCC 50803
Length = 217
Score = 90.6 bits (215), Expect = 2e-17
Identities = 39/83 (46%), Positives = 60/83 (72%)
Frame = +3
Query: 9 ESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGD 188
++LR KL + +RRA Y ++R M +GA GCEV+V+GKLR QRA++ KF +G +I +G
Sbjct: 109 DNLRAKLEEAMPIRRAAYSIIRTAMRAGAAGCEVIVAGKLRAQRARANKFKEGCLISTGH 168
Query: 189 PCNDYVNTATRHVLLRQGVLGIR 257
P ++ ATRH+ +RQGV+G++
Sbjct: 169 PKRIFLAEATRHIKMRQGVIGVK 191
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 86.2 bits (204), Expect = 3e-16
Identities = 47/91 (51%), Positives = 57/91 (62%)
Frame = +3
Query: 3 QAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 182
QAESLR+KL+GGL VRRA YGVL F+MESG +GCEV+ +I S
Sbjct: 155 QAESLRFKLLGGLVVRRAGYGVLSFVMESGTKGCEVI----------------GWYIISS 198
Query: 183 GDPCNDYVNTATRHVLLRQGVLGIRSKSCCR 275
G P DY+N+ RHVLL+QGVL I+ K R
Sbjct: 199 GQPVKDYINSVVRHVLLKQGVLSIKVKIIVR 229
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 74.1 bits (174), Expect = 1e-12
Identities = 37/85 (43%), Positives = 51/85 (60%)
Frame = +3
Query: 3 QAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 182
QA L L G+ RRA Y LR IM +GARG E+ +SGKL G+RAKS++F G +
Sbjct: 95 QAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKV 154
Query: 183 GDPCNDYVNTATRHVLLRQGVLGIR 257
G+P V+ LL+ GV+G++
Sbjct: 155 GNPAETLVSKGYAQALLKLGVIGVK 179
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 69.7 bits (163), Expect = 3e-11
Identities = 36/83 (43%), Positives = 49/83 (59%)
Frame = +3
Query: 6 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 185
A L L G RRA Y L IME+GA+GCE+ +SGKL +RA++ KFV G ++H+G
Sbjct: 95 ASLLARALERGWYFRRAGYRFLYRIMEAGAKGCEIEISGKLVSERARTEKFVAGTIVHTG 154
Query: 186 DPCNDYVNTATRHVLLRQGVLGI 254
DP V + + GVLG+
Sbjct: 155 DPAESMVQKGFDIAIKKLGVLGV 177
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 69.3 bits (162), Expect = 4e-11
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +3
Query: 27 LIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV 206
L+ G+ RRA L IM +GARG E+V+SGKL QR ++ KF G + SG+P + V
Sbjct: 104 LVRGVRFRRAALVALNRIMAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELV 163
Query: 207 NTATRHVLLRQGVLGIR 257
+ A HVLL+ G+ G++
Sbjct: 164 DEAIVHVLLKLGMYGVK 180
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 68.5 bits (160), Expect = 7e-11
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +3
Query: 36 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 215
G+ R+ + +R +M SGA+G ++VSGKL G+R+++ KF+DG M H G+P VN +
Sbjct: 105 GMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKS 164
Query: 216 TRHVLLRQGVLGIRSK 263
+ L+ G++G+ K
Sbjct: 165 HQLAKLKLGIVGVTVK 180
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 67.7 bits (158), Expect = 1e-10
Identities = 34/86 (39%), Positives = 49/86 (56%)
Frame = +3
Query: 6 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 185
AE L L G R+A +R IMESGA GCEV+V+GKL G R+++ KF +G + H G
Sbjct: 96 AERLANALERGWYFRKAGSSTIRRIMESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCG 155
Query: 186 DPCNDYVNTATRHVLLRQGVLGIRSK 263
+P V + + G +G++ K
Sbjct: 156 EPSETIVEKGYALAIKKLGTIGVQVK 181
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 67.7 bits (158), Expect = 1e-10
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +3
Query: 6 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 185
A L + G R+A + LR +M +GA GCEVV+SGKL G R++ KFVDG + HSG
Sbjct: 96 ASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTGARSRVEKFVDGYIKHSG 155
Query: 186 DPCNDYVNTATRHVLLRQGVLGIR 257
+P + V+ + + G LG +
Sbjct: 156 NPVEEVVDEGFAVAVKKLGTLGCK 179
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 66.1 bits (154), Expect = 4e-10
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +3
Query: 6 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 185
A L L G+ RRA YG LR IM +GA+G +++SGKL G RA++ KF++G + + G
Sbjct: 104 ARRLASALERGIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCG 163
Query: 186 DPCNDYVNTATRHVLLRQGVLGI 254
+P ++Y+ + + G +G+
Sbjct: 164 EPGDEYMIEGYVQAVTKPGAIGV 186
>UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zinnia
elegans|Rep: Putative ribosomal protein S3 - Zinnia
elegans (Zinnia)
Length = 143
Score = 65.7 bits (153), Expect = 5e-10
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +3
Query: 135 QRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIRSK 263
QRAKSMKF DG M+ SG P +Y+++A RHVLLRQGVLGI+ K
Sbjct: 2 QRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVK 44
Score = 42.7 bits (96), Expect = 0.004
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +2
Query: 254 QVKIMLPWDQQGKNGPKKPQPDHILVTEPK 343
+VKIML WD GK GPK P PD++++ PK
Sbjct: 42 KVKIMLDWDPTGKLGPKTPLPDNVVIHMPK 71
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 65.3 bits (152), Expect = 7e-10
Identities = 33/83 (39%), Positives = 47/83 (56%)
Frame = +3
Query: 6 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 185
A + L G+ RR Y +R IM +GA+G EV +SGK+RG R+ + KF DG + G
Sbjct: 95 AHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCG 154
Query: 186 DPCNDYVNTATRHVLLRQGVLGI 254
+P +V V L+ GVLG+
Sbjct: 155 EPSVKHVREGFATVQLKPGVLGV 177
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/73 (46%), Positives = 45/73 (61%)
Frame = +3
Query: 36 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 215
G RRA Y LR IM +GA G +V VSGKLRG+RA+ K++ G + SG+ + A
Sbjct: 111 GFHFRRAAYTTLRRIMGAGAIGAQVKVSGKLRGERARFEKYIAGKVYKSGNQVVRLTDRA 170
Query: 216 TRHVLLRQGVLGI 254
HVLL+ GV G+
Sbjct: 171 IAHVLLKVGVEGV 183
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 62.1 bits (144), Expect = 6e-09
Identities = 43/87 (49%), Positives = 49/87 (56%)
Frame = +3
Query: 3 QAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 182
QAESLRYKL+GGLA+ L QRAKSMKF DG +I S
Sbjct: 101 QAESLRYKLLGGLAM--------------------------LCAQRAKSMKFKDGYLISS 134
Query: 183 GDPCNDYVNTATRHVLLRQGVLGIRSK 263
G P DY++ A RHV LRQGVLGI+ K
Sbjct: 135 GQPVKDYIDLAVRHV-LRQGVLGIKVK 160
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 61.3 bits (142), Expect = 1e-08
Identities = 31/86 (36%), Positives = 51/86 (59%)
Frame = +3
Query: 6 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 185
A+ L L G R+A + + IMESGA G E+V+SGK+ G R++ KF G + H+G
Sbjct: 96 ADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNG 155
Query: 186 DPCNDYVNTATRHVLLRQGVLGIRSK 263
+P + V++ +++ G +G+R K
Sbjct: 156 EPAEEIVDSGVGVAVMKLGTIGVRVK 181
>UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 262
Score = 59.7 bits (138), Expect = 3e-08
Identities = 27/72 (37%), Positives = 44/72 (61%)
Frame = +3
Query: 48 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 227
R + LRF++ SG RGC + + G R +R K+ KF GL+ HSG ND++++ + ++
Sbjct: 158 RSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDSDSFYL 217
Query: 228 LLRQGVLGIRSK 263
++G LGI K
Sbjct: 218 NKKRGTLGINIK 229
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 58.4 bits (135), Expect = 8e-08
Identities = 28/69 (40%), Positives = 43/69 (62%)
Frame = +3
Query: 48 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 227
RR +LR +ME+GA G E+++SGKLR +RA+ K G + +GD + V+ A
Sbjct: 113 RRVAMAMLRRVMEAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGDMVDYVVDRAVGKA 172
Query: 228 LLRQGVLGI 254
LL++GV G+
Sbjct: 173 LLKRGVYGV 181
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 57.6 bits (133), Expect = 1e-07
Identities = 30/73 (41%), Positives = 43/73 (58%)
Frame = +3
Query: 36 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 215
G+ RR + +R +ME+GA+G E+VVSGKL +RA+ K G + G + V A
Sbjct: 116 GVRFRRVMFVAIRQLMEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDAKNRVRRA 175
Query: 216 TRHVLLRQGVLGI 254
HVLL+ G+ GI
Sbjct: 176 VVHVLLKPGIYGI 188
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/73 (41%), Positives = 41/73 (56%)
Frame = +3
Query: 36 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 215
G RRA + +R IM SGA G EV+VSGKL +RAK K +G + SG ++ A
Sbjct: 107 GYHFRRAAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRA 166
Query: 216 TRHVLLRQGVLGI 254
+L+ GV G+
Sbjct: 167 IGIAMLKPGVYGV 179
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 55.2 bits (127), Expect = 7e-07
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +3
Query: 36 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 215
G+ RRA LR + E+ +G EV++SGKL +R++ K+ G++I +G + V A
Sbjct: 104 GIRFRRAAIIALRQLQEANVQGAEVIISGKLTTERSRFEKYTTGIVIKAGQDALEKVQEA 163
Query: 216 TRHVLLRQGVLGIR 257
VLL+ G+ +R
Sbjct: 164 VIPVLLKPGIFSVR 177
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 54.4 bits (125), Expect = 1e-06
Identities = 25/73 (34%), Positives = 42/73 (57%)
Frame = +3
Query: 36 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 215
G RRA + +R IM +GA G E+++SGKL +RA+ K +G++ SG ++ A
Sbjct: 107 GYHFRRAAFISMRRIMNAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRA 166
Query: 216 TRHVLLRQGVLGI 254
+L+ G+ G+
Sbjct: 167 IAIAMLKPGIFGV 179
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/86 (31%), Positives = 49/86 (56%)
Frame = +3
Query: 6 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 185
A+ + L G + R+A L +++GA+G + +SGK+ G+RA+ KF+ G + +SG
Sbjct: 95 AKKIALSLEKGWSYRKAGNTSLNRTIQAGAKGVLIKISGKISGERARYQKFIYGNVKYSG 154
Query: 186 DPCNDYVNTATRHVLLRQGVLGIRSK 263
+P + + T L+ G+LG+ K
Sbjct: 155 EPGSKGMITGFSTAKLKVGILGVTVK 180
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 47.2 bits (107), Expect = 2e-04
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = +3
Query: 6 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 185
A L L G RRA + + IM++GARGC +++SGK+ G R + KF G + G
Sbjct: 100 ASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLIILSGKISGPRHRVQKFQQGHIKFCG 159
Query: 186 DPCNDYVNTATRHVLLRQGVLG 251
+ +++ + + G +G
Sbjct: 160 ETALQFMDEGFSTAVKKLGTVG 181
>UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 278
Score = 46.8 bits (106), Expect = 2e-04
Identities = 23/84 (27%), Positives = 49/84 (58%)
Frame = -2
Query: 254 DS*YSLPEKHMSGSSVDVIIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDE 75
D+ +L +H+S +V+ ++ ++RVDHE++ L G+ ++Q +N T T H +
Sbjct: 87 DTQNTLSHQHVSDGNVNKVVGWLTRVDHETVRVLLRLGSSSSQFTGDDNLHTLSTSSHGK 146
Query: 74 TENTIASTTYSETSDKLVS*RFGL 3
+++T+ +++ +T +L FGL
Sbjct: 147 SQHTVGGSSHWQTVQQLGFQGFGL 170
>UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P -
Nanoarchaeum equitans
Length = 230
Score = 46.0 bits (104), Expect = 4e-04
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +3
Query: 42 AVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATR 221
A RR L IM +GA G E+V++G+L GQR K+ +F G + +G ++ A
Sbjct: 108 AYRRLAQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTGTIGQFELDRAFN 167
Query: 222 HVLLRQGVLGI 254
L+ GV GI
Sbjct: 168 IAYLKPGVAGI 178
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 46.0 bits (104), Expect = 4e-04
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 36 GLAVRRACYGVLRFIMES-GARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNT 212
G A RRA ++ IME A G ++ +SGKLRG R+ K G++ +G + V
Sbjct: 106 GTAFRRATMWTIQQIMEKKDAMGVQITISGKLRGDRSAFEKHTSGILPRAGHYADVIVLD 165
Query: 213 ATRHVLLRQGVLGIR 257
HV G++GIR
Sbjct: 166 DVVHVKTPMGLIGIR 180
>UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19;
Bacteroidetes|Rep: 30S ribosomal protein S3 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 246
Score = 41.9 bits (94), Expect = 0.007
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 6 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIH 179
AE++ +L G +A RRA + M GA G ++ VSG+L G + A+S F +G +H
Sbjct: 116 AENIARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQVSGRLNGAEMARSEMFKEGRTPLH 175
Query: 180 SGDPCNDYVNTATRHVLLRQGVLGIRSKSC 269
+ DY A L + G+LGI+ C
Sbjct: 176 TLRADIDY---ALAEALTKVGLLGIKVWIC 202
>UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2;
Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus
radiodurans
Length = 249
Score = 41.1 bits (92), Expect = 0.012
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = +3
Query: 42 AVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIHSGDPCNDYVNTA 215
A RRA + +MESGARG +V++SG+L G ++A++ K ++G + +H+ DY
Sbjct: 130 AFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEGRVPLHTLRADIDYGTAL 189
Query: 216 TRHVLLRQGVLGIR 257
R G+LGI+
Sbjct: 190 AR---TTYGILGIK 200
>UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobacter
sp. BAL39|Rep: 30S ribosomal protein S3 - Pedobacter sp.
BAL39
Length = 281
Score = 35.5 bits (78), Expect = 0.61
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +3
Query: 6 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIH 179
AE + +L ++ RRA + M GA G +++ SG+L G + A+S ++ +G + +H
Sbjct: 116 AEGVAKQLEARISFRRAMKSTIAATMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLH 175
Query: 180 SGDPCNDYVNTATRHVLLRQGVLGIRSKSC 269
+ DY A L G +G++ C
Sbjct: 176 TFRADIDY---ALAEALTTYGKIGVKVWIC 202
>UniRef50_Q9AA22 Cluster: Putative uncharacterized protein; n=1;
Caulobacter vibrioides|Rep: Putative uncharacterized
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 1026
Score = 35.1 bits (77), Expect = 0.81
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -3
Query: 415 DRLRQRRGREGAHFAGRLEGHGLVLGLCHQD 323
DR R+ GR+GA GRL G GL +G+ H +
Sbjct: 491 DRRRRPAGRDGAPVIGRLAGGGLAIGVAHAE 521
>UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;
n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 328
Score = 34.3 bits (75), Expect = 1.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 2 PGRISKIQAYRRSRCTSCLLWCSPFHH 82
PGR +A RRSRC+ C W HH
Sbjct: 240 PGRDWSAEASRRSRCSRCCTWSGDIHH 266
>UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus
carota|Rep: Glycine-rich protein - Daucus carota
(Carrot)
Length = 111
Score = 33.1 bits (72), Expect = 3.3
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +2
Query: 62 WCSPFHHGIWCPWL*SCCIWQAAWSTCQINEVCRW 166
W P G WC W C IW S C+ RW
Sbjct: 32 WWIPPRRGRWCWWRCRCWIWSRLRSWCRSRRRIRW 66
>UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococcus
oeni PSU-1|Rep: 30S ribosomal protein S3 - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 267
Score = 33.1 bits (72), Expect = 3.3
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +3
Query: 39 LAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNT 212
+A RRA G ++ + +GA+G +VSG+L G A+ ++ +G + +H+ DY
Sbjct: 135 VAFRRAMRGAIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEGTVPLHTLRADIDY--- 191
Query: 213 ATRHVLLRQGVLGIRS 260
+ + G LGI++
Sbjct: 192 SWDEAMTSYGNLGIKT 207
>UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10;
Chlorobiaceae|Rep: 30S ribosomal protein S3 - Chlorobium
tepidum
Length = 253
Score = 33.1 bits (72), Expect = 3.3
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +3
Query: 9 ESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIHS 182
E++ Y+L ++ RRA ++ M +GA G + +G+L G + A++ ++ +G + +H+
Sbjct: 120 ENIAYQLENRVSFRRAMKMAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHT 179
Query: 183 GDPCNDYVNTATRHVLLRQGVLGIR 257
DY + T H + G +GI+
Sbjct: 180 LRANVDYA-SVTAHTI--AGAIGIK 201
>UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin H
- Ostreococcus tauri
Length = 322
Score = 32.7 bits (71), Expect = 4.3
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +3
Query: 30 IGGLAVRRACYGVLR----FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMI 176
+ GL R CYG R F+M+ GC+ S +L R K++ VD LM+
Sbjct: 146 LSGLKFRLVCYGATRPLDGFLMDVEDGGCKGATSKQLIECRKKALDIVDRLML 198
>UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8;
Euteleostomi|Rep: Transmembrane protein 56 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 264
Score = 32.7 bits (71), Expect = 4.3
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 57 CYGVLRFI-MESGARGCEVVVSGKLRGQRAKSMK 155
C +L I M ARGC V++GKL+G++A S K
Sbjct: 222 CLDILNIIWMYKIARGCYKVITGKLKGRKADSKK 255
>UniRef50_A3EJX7 Cluster: Putative uncharacterized protein; n=1;
Vibrio cholerae V51|Rep: Putative uncharacterized
protein - Vibrio cholerae V51
Length = 232
Score = 32.3 bits (70), Expect = 5.7
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 209 HCYQTCASQARSTRNQVKIMLPWDQQ-GKNGPKKPQPDHILVTEPKDEPVPLEPTSE 376
H Y+TC R RN+ I+ WD++ G PK +PD + +++ + + V + P E
Sbjct: 36 HYYRTCEDIGRGDRNESCILF-WDRKLGGPKPKFIRPDGLEISDKEFDSVLVYPIHE 91
>UniRef50_A7RK59 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 672
Score = 31.9 bits (69), Expect = 7.5
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 203 RQHCYQTCASQARSTRNQ--VKIMLPWDQQGKNGPKKPQPDHILVTEPKDE 349
++ YQT SQ+R T N K LP+ ++G P DH T P+ E
Sbjct: 402 KEPIYQTLDSQSRETTNHGNTKNSLPYCDMTEDGYLMPVDDHTYPTPPQSE 452
>UniRef50_UPI0000E1E883 Cluster: PREDICTED: similar to Evin1; n=1;
Pan troglodytes|Rep: PREDICTED: similar to Evin1 - Pan
troglodytes
Length = 194
Score = 31.5 bits (68), Expect = 10.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 365 ARGARARPWALSPGCGLVVASSGRSCLAGPTAT 267
A G R W+ S G G+V +SG+ L GP T
Sbjct: 17 AAGRPRRGWSCSRGSGVVATTSGQQTLLGPEGT 49
>UniRef50_UPI0000DB6F56 Cluster: PREDICTED: similar to CG6131-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG6131-PA
- Apis mellifera
Length = 286
Score = 31.5 bits (68), Expect = 10.0
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 181 LETLAMITSTLLPDMCFSGKEY*ESGQNHVAVGPARQE-RPEEATTRPHPGDRA 339
+ T+A + + +C SG++Y + G N+V A + RP T R +P D A
Sbjct: 1 MRTVATVLLLVAAILCVSGQQYQQPGANYVDEYSAYESPRPAHPTPRSYPVDSA 54
>UniRef50_Q8YEE0 Cluster: OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN
OPPD; n=33; Proteobacteria|Rep: OLIGOPEPTIDE TRANSPORT
ATP-BINDING PROTEIN OPPD - Brucella melitensis
Length = 550
Score = 31.5 bits (68), Expect = 10.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 293 NGPKKPQPDHILVTEPKDEPVPLEPTSEV 379
+ P+ P H+L EPK EP +PT++V
Sbjct: 255 DNPQHPYTKHLLAAEPKGEPPLADPTTKV 283
>UniRef50_Q6A6N2 Cluster: 30S ribosomal protein S3; n=27;
Bacteria|Rep: 30S ribosomal protein S3 -
Propionibacterium acnes
Length = 269
Score = 31.5 bits (68), Expect = 10.0
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +3
Query: 6 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIH 179
A+ + +L +A RRA + M +GA G + SG+L G + ++S + +G + +H
Sbjct: 116 AQGIAEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLH 175
Query: 180 SGDPCNDYVNTATRHVLLRQGVLGIRSKSCCRGTSKARTARRSHNQ 317
+ DY R R GV K GT R A+++ Q
Sbjct: 176 TLRADIDYGFFEARTTFGRIGVKVWIYKGDVTGTRAERAAQKAARQ 221
>UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9;
Mycoplasma|Rep: 30S ribosomal protein S3 - Mycoplasma
mobile
Length = 225
Score = 31.5 bits (68), Expect = 10.0
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 6 AESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDGLM 173
AE + KL R A +R M+SGA+G + VSG+L G A+S + +G M
Sbjct: 121 AEQIAIKLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSEGEM 177
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,594,774
Number of Sequences: 1657284
Number of extensions: 9042031
Number of successful extensions: 29764
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 28201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29658
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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