Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30125
(477 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal prote... 153 5e-38
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 30 0.99
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 29 1.7
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 28 4.0
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 28 4.0
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF047655-7|AAC04404.1| 561|Caenorhabditis elegans Hypothetical ... 27 5.3
Z81461-2|CAB03835.1| 135|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z31590-7|CAA83463.1| 361|Caenorhabditis elegans Hypothetical pr... 27 7.0
U53148-2|AAB37078.1| 360|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical pr... 27 9.2
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 27 9.2
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 27 9.2
AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein. 27 9.2
>U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 3 protein.
Length = 247
Score = 153 bits (372), Expect = 5e-38
Identities = 77/109 (70%), Positives = 85/109 (77%), Gaps = 4/109 (3%)
Frame = +3
Query: 3 QAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHS 182
Q ESLRYKL+GGLAVRRACYGVLRFIMESGA+G EV+VSGKLRGQRAK+MKFVDGLMIHS
Sbjct: 103 QCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHS 162
Query: 183 GDPCNDYVNTATRHVLLRQGVLGIRSKSCC----RGTSKARTARRSHNQ 317
G P NDY+ A RHV LRQGV+GI+ K RG + R A H Q
Sbjct: 163 GHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGQNGPRNALPDHVQ 211
Score = 55.6 bits (128), Expect = 2e-08
Identities = 21/41 (51%), Positives = 32/41 (78%)
Frame = +2
Query: 254 QVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 376
+VKIMLP+D +G+NGP+ PDH+ + EP++E +P EP S+
Sbjct: 187 KVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQ 227
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 29.9 bits (64), Expect = 0.99
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 439 SYILSDSGDRLRQRRGREGAHFAGRLEGH 353
+Y+ +GD LR R REG+ F +E H
Sbjct: 27 NYVHLSAGDLLRAERQREGSEFGALIESH 55
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +2
Query: 203 RQHCYQTCASQARSTRNQVKIMLPWDQQGKNGPKKPQPDHILVTE 337
R+ C +S + K L W K+ P++ DH+L+ E
Sbjct: 313 RKSIEDLCTKIHKSLQKDFKCALVWGASAKHNPQRVGRDHVLIDE 357
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +2
Query: 203 RQHCYQTCASQARSTRNQVKIMLPWDQQGKNGPKKPQPDHILVTE 337
R+ C +S + K L W K+ P++ DH+L+ E
Sbjct: 313 RKSIEDLCTKIHKSLQKDFKCALVWGASAKHNPQRVGRDHVLIDE 357
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 436 YILSDSGDRLRQRRGREGAHFAGRLEGH 353
Y+ +GD LR R R G+ + +EGH
Sbjct: 28 YVHLSAGDLLRAERERAGSEYGALIEGH 55
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 308 PQPDHILVTEPKDEPVPL---EPTSE 376
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 308 PQPDHILVTEPKDEPVPL---EPTSE 376
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 308 PQPDHILVTEPKDEPVPL---EPTSE 376
P+P+ ++++EP EPVP+ EP E
Sbjct: 468 PEPEPVVISEPVPEPVPIVVEEPPKE 493
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 308 PQPDHILVTEPKDEPVPL---EPTSE 376
P+P+ ++++EP EPVP+ EP E
Sbjct: 468 PEPEPVVISEPVPEPVPIVVEEPPKE 493
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 308 PQPDHILVTEPKDEPVPL---EPTSE 376
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 308 PQPDHILVTEPKDEPVPL---EPTSE 376
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>AF047655-7|AAC04404.1| 561|Caenorhabditis elegans Hypothetical
protein C17B7.10 protein.
Length = 561
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 150 MKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI-RSKSCCRGTSKARTAR 302
++ +DGLM DP ++ + + L+R GV + S +C R +S + +R
Sbjct: 74 LQIIDGLMFQLPDPSDETFSKCSEFKLIRTGVAELFLSIACDRRSSHSPLSR 125
>Z81461-2|CAB03835.1| 135|Caenorhabditis elegans Hypothetical
protein C04F12.4 protein.
Length = 135
Score = 27.1 bits (57), Expect = 7.0
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +3
Query: 111 VVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA--TRHVLLRQGVLGIRSKSCCRGTS 284
+ SGK +G+ A + +DG + P +D T + + L + VL +R +G
Sbjct: 15 IASGKDQGKLAAIVNVIDGNRVQIDGPSSDVTRTVRNLKDLQLTKFVLKLRVGQRTKGVK 74
Query: 285 KARTARR--SHNQTTSW 329
A A + + Q T W
Sbjct: 75 AAFDAAKVTENFQKTQW 91
>Z31590-7|CAA83463.1| 361|Caenorhabditis elegans Hypothetical
protein R01H10.6 protein.
Length = 361
Score = 27.1 bits (57), Expect = 7.0
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -2
Query: 200 IIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTIASTTYSETSDKL 24
++ R + +E+IY L TT+ FTTT H + NTI+S + + + K+
Sbjct: 89 LVTRNRGISNEAIYVLAKVSATTTKFEFI--FTTTNPASHSKLFNTISSISRAYETTKM 145
>U53148-2|AAB37078.1| 360|Caenorhabditis elegans Hypothetical
protein C26F1.6 protein.
Length = 360
Score = 27.1 bits (57), Expect = 7.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 22 TSLSEVSLYVVLAMVFSVSSWNLVPVVVKLLYLASC 129
T++ V LY V M SVS W LV + + YLA C
Sbjct: 77 TAMIMVYLYPVTIMFQSVSVWLLVSITID-RYLAVC 111
>Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical
protein DY3.7 protein.
Length = 922
Score = 26.6 bits (56), Expect = 9.2
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 165 GLMIHSGDPCNDY 203
GL++H G PCN+Y
Sbjct: 691 GLILHPGSPCNNY 703
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +3
Query: 126 LRGQRAKSMKFVDGLMIHSG 185
LRG R K+ FV+G+++++G
Sbjct: 272 LRGSRIKNTTFVEGIVVYAG 291
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +3
Query: 126 LRGQRAKSMKFVDGLMIHSG 185
LRG R K+ FV+G+++++G
Sbjct: 272 LRGSRIKNTTFVEGIVVYAG 291
>AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein.
Length = 922
Score = 26.6 bits (56), Expect = 9.2
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 165 GLMIHSGDPCNDY 203
GL++H G PCN+Y
Sbjct: 691 GLILHPGSPCNNY 703
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,103,618
Number of Sequences: 27780
Number of extensions: 210206
Number of successful extensions: 655
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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