Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30121
         (725 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0311 - 2753062-2753232,2753340-2753381,2754490-2754667,275...    29   2.8  
01_06_0356 + 28662956-28664043,28664255-28665139,28665227-286658...    29   3.8  
11_08_0011 + 27612206-27615110,27615211-27615538,27615989-276160...    29   5.0  
06_01_1112 - 9157776-9158149,9158248-9161158                           29   5.0  
05_05_0036 - 21758409-21758531,21758891-21759206,21759964-217611...    29   5.0  
04_04_0326 - 24407201-24407374,24407397-24407460,24408266-244086...    29   5.0  
03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298     28   6.6  
11_08_0009 + 27600881-27602592,27602665-27603008,27603159-276038...    28   8.7  
08_02_1168 + 24853895-24854216,24854264-24854286,24856102-248561...    28   8.7  

>08_01_0311 -
           2753062-2753232,2753340-2753381,2754490-2754667,
           2755021-2755118,2755964-2756098,2756280-2756444,
           2756529-2756693,2757082-2757299,2758508-2758811
          Length = 491

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = -1

Query: 566 NLCHLPSLYARVVPTIIKSLCCLMTPASKPFHLASVMRRNILLPRPGISSRS 411
           NL HL     R  P +   + CL  P  +   L   +  ++ LP P + +R+
Sbjct: 31  NLAHLAGEVGRAEPPVRLRVTCLADPHPESLQLGLQLAADLALPAPQVYTRT 82


>01_06_0356 +
           28662956-28664043,28664255-28665139,28665227-28665840,
           28665929-28666338
          Length = 998

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 82  PDIILSSTWTKKSPSCTWV 138
           P+ IL+S WT  +P C+W+
Sbjct: 43  PNGILASNWTASAPFCSWI 61


>11_08_0011 +
           27612206-27615110,27615211-27615538,27615989-27616059,
           27616962-27617118,27617676-27617709
          Length = 1164

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 82  PDIILSSTWTKKSPSCTWV 138
           PD IL+  WT  +P C WV
Sbjct: 51  PDNILAGNWTPGTPFCQWV 69


>06_01_1112 - 9157776-9158149,9158248-9161158
          Length = 1094

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 82  PDIILSSTWTKKSPSCTWV 138
           PD IL+  WT  +P C WV
Sbjct: 51  PDNILAGNWTAGTPFCQWV 69


>05_05_0036 -
           21758409-21758531,21758891-21759206,21759964-21761121,
           21761236-21761333
          Length = 564

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 319 VRWPWICHDGWPRLFDASI*SSASLLPHVRSE 414
           VR+ W+C+D   RL D S+ S  S    ++ E
Sbjct: 416 VRFEWVCYDSAKRLLDKSLYSVLSDFAQIQDE 447


>04_04_0326 -
           24407201-24407374,24407397-24407460,24408266-24408689,
           24408885-24409057,24409178-24409275,24409723-24409853,
           24410053-24410174,24411091-24411245,24411976-24412081,
           24412328-24412419,24412499-24412620,24413444-24413544,
           24413636-24413849,24414173-24414311,24415228-24415584
          Length = 823

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = +1

Query: 292 LAVWPSRVQVRWPWICHDGWPRLFDASI*SSASLLPHVRSERLDIPGRGRR 444
           LAV PS      PW CH    R+ +A   +S    P  R E   +  +  R
Sbjct: 731 LAVTPSMFTDHLPWRCHYAMQRVLEAQTAASCPDSPESRIELFSVQLKANR 781


>03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298
          Length = 439

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 527 AQPEHTMMVNGINWTLAGSLPSAL*PWTTRCSKRSPIRPAPTY 655
           +QP H        WTL GSL +     +TR   R P+R  P +
Sbjct: 54  SQPRHFCRACRRYWTLGGSLRNVPIGGSTRKRPRPPVRRPPVH 96


>11_08_0009 +
           27600881-27602592,27602665-27603008,27603159-27603806,
           27603908-27604296
          Length = 1030

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 64  QGRLTYPDIILSSTWTKKSPSCTWV 138
           +G L+ P  IL++ WT  +P C W+
Sbjct: 50  KGELSDPYNILATNWTAGTPFCRWM 74


>08_02_1168 +
           24853895-24854216,24854264-24854286,24856102-24856181,
           24856286-24856369,24856843-24857074
          Length = 246

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 491 PASKPFHLASVMRRNILLPRPGISSRSERTCGRREA 384
           P + P+ +         LPR G     +R CGRREA
Sbjct: 18  PGALPYRIPLSSPHLPFLPRSGRGEGRQRRCGRREA 53


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,257,892
Number of Sequences: 37544
Number of extensions: 564251
Number of successful extensions: 1496
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)