Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30121
(725 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 38 0.008
SB_10655| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_54793| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 30 2.2
SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 30 2.2
SB_47423| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_22760| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_32455| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_32588| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043) 29 5.1
SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06) 29 5.1
SB_3026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_17094| Best HMM Match : NapE (HMM E-Value=7.7) 28 6.7
SB_44438| Best HMM Match : Phosphorylase (HMM E-Value=1e-22) 28 6.7
SB_20856| Best HMM Match : Transposase_11 (HMM E-Value=2.3) 28 6.7
SB_46547| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_7492| Best HMM Match : Laminin_G_2 (HMM E-Value=0.0025) 28 8.9
SB_33579| Best HMM Match : Laminin_G_2 (HMM E-Value=3.2e-34) 28 8.9
SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 28 8.9
SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 1841
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = +2
Query: 281 KLISSQSGPQEYRFDGRGYAT-MAGRGYLTPQSNQVLLFFRTYAPNGLIY----LVGEGG 445
+++ ++ P+ Y FDG YA + + N V+L FRT PNGL+ G+ G
Sbjct: 749 RILKRETDPEGY-FDGSAYAEYLLNDEKVDSNKNTVMLEFRTIQPNGLLLHGKSTGGDYG 807
Query: 446 YFFSLLMQDGRVYLQVSLG 502
+F++ + G++ SLG
Sbjct: 808 DYFTIELIGGKLRFATSLG 826
>SB_10655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 774
Score = 35.1 bits (77), Expect = 0.058
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 60 TPRKADLPGHHTIFNLDKEKSKLYVGGVPSDAKLQG-ISFPAFEGQIEELMIGDTPVGLW 236
T K +P +FN D S + +GG P L I P++ G I+ L I VGLW
Sbjct: 242 TDLKLSVPNPTLMFNKD---SHMILGGKPDGVTLPPEIDTPSYVGSIDSLSINHYRVGLW 298
Query: 237 N 239
N
Sbjct: 299 N 299
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 541 YNDGKWHKLDARRFLAKCSLTVDNEVLK 624
YNDGKWH + + + +VD EV K
Sbjct: 518 YNDGKWHHVHLDKNGLDITFSVDQEVKK 545
>SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 317 RFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLVGE--GGYFFSLLMQDGRVYL 487
RF G GYA ++ N + L F+T P+GL+ G+ GY+F L + G ++L
Sbjct: 1105 RFRGDGYAGLSSG---ITDMNSLSLKFKTLQPSGLLVYSGDVSTGYYFFLALFHGNLFL 1160
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 538 AYNDGKWHKLDARRFLAKCSLTVDNEVLKAESNSPSADIPS 660
+Y+DG+W+ L R LA +LTV + +S S ++PS
Sbjct: 989 SYSDGRWYNLRLTRGLANATLTVTPVNSQGVIDSVSINLPS 1029
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 120 SKLYVGGVPSDAKLQGISFPAFEGQIEELMIGDTPVGLWNFVSANN*R 263
S LY+GG+P + + + F G I+ +++ P+ LW N R
Sbjct: 796 SPLYIGGLP-EGVMPNQTQRFFRGCIDNVVVNQKPLSLWKPKQVNGNR 842
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 320 FDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLVGEGGY--FFSLLMQDGR 478
F G GY G +N++ L+FRT P+GLI + + ++++++G+
Sbjct: 1339 FPGNGYYKFPGSYVREGTTNEIELWFRTQYPDGLILFLSDSSQADLLAVVLREGK 1393
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Frame = +1
Query: 445 IFLLITDARWKGLLAGVIRQHKDLII-----------VGTTRAYNDGKWHKLDARRFLAK 591
+ L ++D+ LLA V+R+ K I V ++D +WH+L R +
Sbjct: 1372 LILFLSDSSQADLLAVVLREGKPWFIFDCQTGPAAFTVSAAVTFDDNQWHRLQLTRKDSV 1431
Query: 592 CSLTVDNEVLKAESNSPSADIPSLDT 669
+LTVD + S+S ++ S+ T
Sbjct: 1432 GTLTVDGIYTASGSSSGASTFISMGT 1457
>SB_54793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 573 SPVPCQVLSDRGQRGAQSGVQFAQRRHTELRH 668
+PV C L R + +SG QRRH ++RH
Sbjct: 270 APVTCSSLLSRDRSSRRSGSARIQRRHGDMRH 301
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 428 GISSRSERTCGRREALD*IEASNNLGQPSWHIHGHRTCTLEGQTARR 288
G + E CG+R D +NN+ Q S IHG+ TL+G R
Sbjct: 684 GTNKLYECKCGQRHCGDKSNLTNNVCQFSHCIHGNCMVTLDGHRCAR 730
>SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 683
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 544 NDGKWHKLDARRFLAKCSLTVDNEVLKAESNSPSADIPSLDTMNFGGNNKGILQVAG 714
+D +WH+ + +R LT+D E LK + P PSL N G +G + + G
Sbjct: 325 SDARWHRAEIKRARRNVKLTLD-ERLKVDGTCP----PSLTAFNMQG-GEGRVYIGG 375
>SB_47423| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 855
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 538 AYNDGKWHKLDARRFLAKCSLTVDNEVLKAESNSPSADIPSLDTMNFG 681
+++D KWHKL RR L + ++VDN + E SA + + M G
Sbjct: 603 SFSDLKWHKLVIRRELEETVVSVDN--ITTEPIKCSAQLSKMVAMYAG 648
>SB_22760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 570
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 120 SKLYVGGVPSDAKLQGISFPAFEGQIEELMIGDTPVG 230
S LYVGG P D L ++FP G E+ G+ VG
Sbjct: 140 SALYVGGFPLDISLNSLAFP---GSFYEIYNGNRFVG 173
>SB_32455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -3
Query: 534 GCANYYQILVLPNDTCK*TLPSCISNEKKYPPSPTRYIKP--FGAYVRKKRST 382
G +++Y I + P DTC + IS K+ PPS ++ G KRST
Sbjct: 235 GTSDHYTISIAPADTCSLVKNTNISTWKRDPPSRPSQLRQGVRGVQAVPKRST 287
>SB_32588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1135
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Frame = +2
Query: 320 FDGRGYATMAGRGY---LTPQSNQVLLFFRTYAPNGLIYLVG-----EGGYFFSLLMQDG 475
FDG YA + N + L FRT PNGL+ L G E G +F++ + G
Sbjct: 27 FDGNAYAEYLLHDQDEKIDSPKNTIELQFRTIQPNGLL-LHGSSSGEEYGDYFTIELIGG 85
Query: 476 RVYLQVSLG 502
++ +SLG
Sbjct: 86 KLRFAISLG 94
>SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043)
Length = 811
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = -1
Query: 725 RSLDPATCSIPLLFPPKFIVSKLGMSALGELDSAL-STSLSTVREHLARNRRASNLCHLP 549
R++D ATC P F +K S+ ++DS + + +HL+ N SN +
Sbjct: 437 RAMDSATCEHDKSSSPDFTAAKYKYSSATDMDSVICEQEECSCLDHLSANAEYSNKREME 496
Query: 548 SLYARVVPTIIKSLCCLMTP 489
+ V T ++ C+ P
Sbjct: 497 GVTC-VESTRLELTSCVSPP 515
>SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)
Length = 2009
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -1
Query: 626 ALSTSLSTVREHLARNRRASNLCHLPSLYARVVPTIIKSLCCLMTPASKPFHL 468
A STS +TVR RA +L H P AR T + CC+ + HL
Sbjct: 1028 AASTSYATVRLIYPIRHRALHLPHTP---ARAASTPYATACCIYPIRHRALHL 1077
>SB_3026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 915
Score = 28.7 bits (61), Expect = 5.1
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Frame = -1
Query: 686 FPPKFIVSKL--GMSALGELDSALSTSLSTVREHLARNRRASNLCHLPSLYARVVP---T 522
F P+ + L + A GE + + + T +LA N+ ++ L+A V P
Sbjct: 338 FVPQMATAALYGNLFAFGETEHNWTEFIETYERYLAANKIRVSI-----LFANVGPKAYN 392
Query: 521 IIKSLCCLMTPASKPFHLASVMRRNILLPR 432
IIKSLC PA K F + ++ P+
Sbjct: 393 IIKSLCLPEKPAEKTFEFITKAVKHHFKPK 422
>SB_17094| Best HMM Match : NapE (HMM E-Value=7.7)
Length = 219
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 70 RLTYPDIILSSTWTKKSPSCTWVECLPMPNSRVLVFQPSKVK 195
R + PD+ L S +K P V C P+ R + P K+K
Sbjct: 97 RASSPDLSLKSKRARKFPRLLLVTCPPLCPLRAMFCLPQKIK 138
>SB_44438| Best HMM Match : Phosphorylase (HMM E-Value=1e-22)
Length = 398
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 215 SNHQLFYLTFEGWKTNTLEFGIGRHST 135
+NH L E W TN LE+ + RH T
Sbjct: 361 TNHTLLPEALERWNTNMLEYILPRHLT 387
>SB_20856| Best HMM Match : Transposase_11 (HMM E-Value=2.3)
Length = 449
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 41 NGTDTIHSKEG*LTRTSYYLQPGQRKVQVVRGWSAFRCQTPGY 169
N DT+ ++ R + + G R V V+RG+ R ++P +
Sbjct: 200 NFADTLRARRPPALRQPVHAKKGYRNVHVIRGYDTARDESPSH 242
>SB_46547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1058
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = -1
Query: 662 KLGMSALGELDSALSTSLSTVREHLARNRRASNLCHLPSLYARVVPTIIKSLCCLMTPAS 483
+LG+ A G+ + + ++S + +R N+ + L +++ + LC +TP S
Sbjct: 728 QLGIDAAGQAGAIVEAAISYTGDVTDPSRTKYNIDYYMDLASKLAKSGTHILCIKVTPTS 787
Query: 482 KPF-HLASVMRRNILLPRPGISSRSE 408
K LA M +N L R + E
Sbjct: 788 KVVGDLAQFMVQNNLDKRDVLEKADE 813
>SB_7492| Best HMM Match : Laminin_G_2 (HMM E-Value=0.0025)
Length = 87
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 547 DGKWHKLDARRFLAKCSLTVD-NEVLKAESNSPSADIPSLDTMNFGG 684
DGKWH+++ + S+ VD N+ ++ +S + D + GG
Sbjct: 26 DGKWHRVNLNKIRNTASIQVDGNDPVEVKSPGSLGNTNLYDPLYVGG 72
>SB_33579| Best HMM Match : Laminin_G_2 (HMM E-Value=3.2e-34)
Length = 1071
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 374 SNQVLLFFRTYAPNGLIYLVGE-GGYFFSLLMQDGRVYLQVSLGNTRI 514
+N + L F+T PNGL++ G G ++ +Q ++ + +L T++
Sbjct: 49 ANNLTLSFKTIHPNGLLFFTGNLGVQHIAVYLQHCKLIVNATLCPTQV 96
>SB_32282| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 897
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Frame = +1
Query: 478 GLLAGVIRQHKDL-----IIVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKAESNSP 642
GL+ G++ DL ++ +T +DG WH + R L VD+E+ ++
Sbjct: 780 GLIDGILEVRYDLGVGRETVIRSTATLDDGYWHSVKFVRKSLAAYLKVDDEIKAGIASDS 839
Query: 643 SADIPSLDTMNFGG 684
+ D + GG
Sbjct: 840 QYRQLNSDVLFIGG 853
>SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1455
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -1
Query: 500 LMTPASKPFHLASV--MRRNILLPRPGISSRSERTCGRREALD*IEASNNLGQPSWHIHG 327
L++ K FH V + +N+L P + + E C + ++ P+WHIHG
Sbjct: 1255 LVSDVVKEFHSVPVTLLAKNVLAITPFVGTLCE--CTSPDVSTSLQEHYRFNGPAWHIHG 1312
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,945,591
Number of Sequences: 59808
Number of extensions: 616430
Number of successful extensions: 1481
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1478
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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