Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30121
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 48 7e-06
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 48 7e-06
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 48 7e-06
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 48 7e-06
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 36 0.029
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 36 0.029
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 36 0.029
Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical pr... 31 1.1
U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein. 31 1.1
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 1.1
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 1.1
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 1.1
AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical... 31 1.1
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 30 1.9
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 30 1.9
Z66523-9|CAE17856.1| 271|Caenorhabditis elegans Hypothetical pr... 29 2.6
U49829-6|AAA93387.1| 498|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 29 4.5
Z68116-2|CAA92173.1| 243|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 7.8
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 7.8
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 28 7.8
U13876-5|AAA21176.2| 449|Caenorhabditis elegans Mammalian bysti... 28 7.8
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 7.8
AF016431-2|AAC24249.2| 148|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +3
Query: 84 GHHTIFNLDKEKSKLYVGGVPSDAKL-QGISFPAFEGQIEELMIGDTPVGLWN 239
G+ ++ NL+++ S+L+VGGVP+ A++ + + F G IE L + P+GLWN
Sbjct: 2820 GNKSVLNLNQQISRLFVGGVPTSARISKDLYNRDFVGDIESLKLHGEPIGLWN 2872
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +2
Query: 257 LKGARQRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLVG 436
+ GA+++ K I+ + DG GY + + ++ ++ L F T++P+GL++ VG
Sbjct: 2881 VNGAQKKPK-ITDNADELVVSLDGEGYTSYKPSHWNPRKATKISLSFLTFSPHGLLFFVG 2939
Query: 437 EGGYFFSLLMQDGRVYLQVSLGN 505
+ F +L + DG V L V LG+
Sbjct: 2940 KDKDFMALELSDGGVKLSVDLGS 2962
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +1
Query: 541 YNDGKWHKLDARRFLAKCSLTVDNEVLKAESNSPSAD--IPSLDTMNFGGNNKGI 699
YNDGKWH + R + +D E E + P D + + + GG G+
Sbjct: 2974 YNDGKWHTVSIVREEKHVKIMIDGETEVLEGDVPGKDSEMSVTEFLYIGGTPSGL 3028
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +3
Query: 84 GHHTIFNLDKEKSKLYVGGVPSDAKL-QGISFPAFEGQIEELMIGDTPVGLWN 239
G+ ++ NL+++ S+L+VGGVP+ A++ + + F G IE L + P+GLWN
Sbjct: 2820 GNKSVLNLNQQISRLFVGGVPTSARISKDLYNRDFVGDIESLKLHGEPIGLWN 2872
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +2
Query: 257 LKGARQRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLVG 436
+ GA+++ K I+ + DG GY + + ++ ++ L F T++P+GL++ VG
Sbjct: 2881 VNGAQKKPK-ITDNADELVVSLDGEGYTSYKPSHWNPRKATKISLSFLTFSPHGLLFFVG 2939
Query: 437 EGGYFFSLLMQDGRVYLQVSLGN 505
+ F +L + DG V L V LG+
Sbjct: 2940 KDKDFMALELSDGGVKLSVDLGS 2962
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +1
Query: 541 YNDGKWHKLDARRFLAKCSLTVDNEVLKAESNSPSAD--IPSLDTMNFGGNNKGI 699
YNDGKWH + R + +D E E + P D + + + GG G+
Sbjct: 2974 YNDGKWHTVSIVREEKHVKIMIDGETEVLEGDVPGKDSEMSVTEFLYIGGTPSGL 3028
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +3
Query: 84 GHHTIFNLDKEKSKLYVGGVPSDAKL-QGISFPAFEGQIEELMIGDTPVGLWN 239
G+ ++ NL+++ S+L+VGGVP+ A++ + + F G IE L + P+GLWN
Sbjct: 634 GNKSVLNLNQQISRLFVGGVPTSARISKDLYNRDFVGDIESLKLHGEPIGLWN 686
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +2
Query: 257 LKGARQRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLVG 436
+ GA+++ K I+ + DG GY + + ++ ++ L F T++P+GL++ VG
Sbjct: 695 VNGAQKKPK-ITDNADELVVSLDGEGYTSYKPSHWNPRKATKISLSFLTFSPHGLLFFVG 753
Query: 437 EGGYFFSLLMQDGRVYLQVSLGN 505
+ F +L + DG V L V LG+
Sbjct: 754 KDKDFMALELSDGGVKLSVDLGS 776
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +1
Query: 541 YNDGKWHKLDARRFLAKCSLTVDNEVLKAESNSPSAD--IPSLDTMNFGGNNKGI 699
YNDGKWH + R + +D E E + P D + + + GG G+
Sbjct: 788 YNDGKWHTVSIVREEKHVKIMIDGETEVLEGDVPGKDSEMSVTEFLYIGGTPSGL 842
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +3
Query: 84 GHHTIFNLDKEKSKLYVGGVPSDAKL-QGISFPAFEGQIEELMIGDTPVGLWN 239
G+ ++ NL+++ S+L+VGGVP+ A++ + + F G IE L + P+GLWN
Sbjct: 2820 GNKSVLNLNQQISRLFVGGVPTSARISKDLYNRDFVGDIESLKLHGEPIGLWN 2872
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +2
Query: 257 LKGARQRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLVG 436
+ GA+++ K I+ + DG GY + + ++ ++ L F T++P+GL++ VG
Sbjct: 2881 VNGAQKKPK-ITDNADELVVSLDGEGYTSYKPSHWNPRKATKISLSFLTFSPHGLLFFVG 2939
Query: 437 EGGYFFSLLMQDGRVYLQVSLGN 505
+ F +L + DG V L V LG+
Sbjct: 2940 KDKDFMALELSDGGVKLSVDLGS 2962
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +1
Query: 541 YNDGKWHKLDARRFLAKCSLTVDNEVLKAESNSPSAD--IPSLDTMNFGGNNKGI 699
YNDGKWH + R + +D E E + P D + + + GG G+
Sbjct: 2974 YNDGKWHTVSIVREEKHVKIMIDGETEVLEGDVPGKDSEMSVTEFLYIGGTPSGL 3028
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +3
Query: 84 GHHTIFNLDKEKSKLYVGGVPSDAKL-QGISFPAFEGQIEELMIGDTPVGLWN 239
G+ ++ NL+++ S+L+VGGVP+ A++ + + F G IE L + P+GLWN
Sbjct: 2820 GNKSVLNLNQQISRLFVGGVPTSARISKDLYNRDFVGDIESLKLHGEPIGLWN 2872
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +2
Query: 257 LKGARQRDKLISSQSGPQEYRFDGRGYATMAGRGYLTPQSNQVLLFFRTYAPNGLIYLVG 436
+ GA+++ K I+ + DG GY + + ++ ++ L F T++P+GL++ VG
Sbjct: 2881 VNGAQKKPK-ITDNADELVVSLDGEGYTSYKPSHWNPRKATKISLSFLTFSPHGLLFFVG 2939
Query: 437 EGGYFFSLLMQDGRVYLQVSLGN 505
+ F +L + DG V L V LG+
Sbjct: 2940 KDKDFMALELSDGGVKLSVDLGS 2962
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +1
Query: 541 YNDGKWHKLDARRFLAKCSLTVDNEVLKAESNSPSAD--IPSLDTMNFGGNNKGI 699
YNDGKWH + R + +D E E + P D + + + GG G+
Sbjct: 2974 YNDGKWHTVSIVREEKHVKIMIDGETEVLEGDVPGKDSEMSVTEFLYIGGTPSGL 3028
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 383 VLLFFRTYAPNGLIYLVGE--GGYFFSLLMQDGRVYLQVSLG 502
+ + F ++PNGL+Y G G F ++ + DG+V +++LG
Sbjct: 2492 ITVIFNAFSPNGLLYFRGSEASGDFVAIYLNDGKVMFKINLG 2533
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 90 HTIFNLDKEKSKLYVGGVPSDAKLQGISFPAFEGQIEELMIGDTPVGLWNFVS 248
++IFN ++ + VG + A G++ F G + L I + P+ LW+F S
Sbjct: 2400 NSIFNTIPGETTIDVGTDETVASDIGLTTHKFSGIVGGLRIDEVPLPLWSFES 2452
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 383 VLLFFRTYAPNGLIYLVGE--GGYFFSLLMQDGRVYLQVSLG 502
+ + F ++PNGL+Y G G F ++ + DG+V +++LG
Sbjct: 2492 ITVIFNAFSPNGLLYFRGSEASGDFVAIYLNDGKVMFKINLG 2533
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 90 HTIFNLDKEKSKLYVGGVPSDAKLQGISFPAFEGQIEELMIGDTPVGLWNFVS 248
++IFN ++ + VG + A G++ F G + L I + P+ LW+F S
Sbjct: 2400 NSIFNTIPGETTIDVGTDETVASDIGLTTHKFSGIVGGLRIDEVPLPLWSFES 2452
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 383 VLLFFRTYAPNGLIYLVGE--GGYFFSLLMQDGRVYLQVSLG 502
+ + F ++PNGL+Y G G F ++ + DG+V +++LG
Sbjct: 2492 ITVIFNAFSPNGLLYFRGSEASGDFVAIYLNDGKVMFKINLG 2533
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 90 HTIFNLDKEKSKLYVGGVPSDAKLQGISFPAFEGQIEELMIGDTPVGLWNFVS 248
++IFN ++ + VG + A G++ F G + L I + P+ LW+F S
Sbjct: 2400 NSIFNTIPGETTIDVGTDETVASDIGLTTHKFSGIVGGLRIDEVPLPLWSFES 2452
>Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 524 LAQPEHTMMVNG--INWTLAGSLPSAL*PWTTRCSKRSPIRPAPTY 655
L + E T++V+G +N T + LP+ P TT S SP++ P Y
Sbjct: 419 LIREEDTLLVDGSHLNMTSSAILPAHQIPSTTTTSTSSPVQEQPWY 464
>U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein.
Length = 494
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 524 LAQPEHTMMVNG--INWTLAGSLPSAL*PWTTRCSKRSPIRPAPTY 655
L + E T++V+G +N T + LP+ P TT S SP++ P Y
Sbjct: 419 LIREEDTLLVDGSHLNMTSSAILPAHQIPSTTTTSTSSPVQEQPWY 464
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 120 SKLYVGGVPSDAKLQGIS--FPAFEGQIEELMIGDTPVGLWNFVSANN*REPDRGI 281
+K+YVGG+PSDA Q + F F G+I ++ + P G + FV ++ R+ + +
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRF-GRIRKVWVARRPPG-FAFVEYDDVRDAEDAV 56
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 120 SKLYVGGVPSDAKLQGIS--FPAFEGQIEELMIGDTPVGLWNFVSANN*REPDRGI 281
+K+YVGG+PSDA Q + F F G+I ++ + P G + FV ++ R+ + +
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRF-GRIRKVWVARRPPG-FAFVEYDDVRDAEDAV 56
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 120 SKLYVGGVPSDAKLQGIS--FPAFEGQIEELMIGDTPVGLWNFVSANN*REPDRGI 281
+K+YVGG+PSDA Q + F F G+I ++ + P G + FV ++ R+ + +
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRF-GRIRKVWVARRPPG-FAFVEYDDVRDAEDAV 56
>AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 524 LAQPEHTMMVNG--INWTLAGSLPSAL*PWTTRCSKRSPIRPAPTY 655
L + E T++V+G +N T + LP+ P TT S SP++ P Y
Sbjct: 419 LIREEDTLLVDGSHLNMTSSAILPAHQIPSTTTTSTSSPVQEQPWY 464
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 523 VGTTRAYNDGKWHKLDARRFLAKCSLTVDN-EVLKAESNSPSADIPSLDTMNFGGNN 690
+ T D WH + RR KC L VD+ ++L ++ ++ S + GG N
Sbjct: 1379 ISTNVTVADNHWHSVSFRRKERKCELWVDSKKILHVVASPGDVNLDSNGLVYLGGAN 1435
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 523 VGTTRAYNDGKWHKLDARRFLAKCSLTVDN-EVLKAESNSPSADIPSLDTMNFGGNN 690
+ T D WH + RR KC L VD+ ++L ++ ++ S + GG N
Sbjct: 1369 ISTNVTVADNHWHSVSFRRKERKCELWVDSKKILHVVASPGDVNLDSNGLVYLGGAN 1425
>Z66523-9|CAE17856.1| 271|Caenorhabditis elegans Hypothetical
protein M05D6.9 protein.
Length = 271
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 602 VREHLARNRRASNLCHLPSLYARVVPTIIK 513
+RE++ RNR L HLP YAR P +I+
Sbjct: 137 LREYVCRNRFPEMLQHLP-CYARAAPALIR 165
>U49829-6|AAA93387.1| 498|Caenorhabditis elegans Hypothetical
protein F27D9.2 protein.
Length = 498
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 10 SKTLNPREPGQWNGYYPLQ---GRLTYPDIILSSTWTKKSPSCTWV 138
SK + PR G + G Y + GR+ P +++S +T PS W+
Sbjct: 419 SKVIGPRPQGTYQGVYQMAGSFGRMLAP-LLMSYVYTLYGPSIPWL 463
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 520 IVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKAESNSP 642
IV + + DG+WH++ R + +TVD+E L+ E+ SP
Sbjct: 3805 IVTSKTSVVDGQWHRIAISRRQRRTRMTVDDEDLQ-EAFSP 3844
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 520 IVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKAESNSP 642
IV + + DG+WH++ R + +TVD+E L+ E+ SP
Sbjct: 3805 IVTSKTSVVDGQWHRIAISRRQRRTRMTVDDEDLQ-EAFSP 3844
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +1
Query: 520 IVGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKAESNSP 642
IV + + DG+WH++ R + +TVD+E L+ E+ SP
Sbjct: 3805 IVTSKTSVVDGQWHRIAISRRQRRTRMTVDDEDLQ-EAFSP 3844
>Z68116-2|CAA92173.1| 243|Caenorhabditis elegans Hypothetical
protein F42F12.3 protein.
Length = 243
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 16 TLNPREPGQWNGYYPLQGRLTYPDII 93
T N G WN YY L+ LTY +I
Sbjct: 112 TYNGTLQGVWNSYYQLEEELTYRHLI 137
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +3
Query: 435 GKEDISSHY*C--KMEGFTCRC 494
G+ D SSH C +GFTCRC
Sbjct: 185 GRHDCSSHATCIDTADGFTCRC 206
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +3
Query: 435 GKEDISSHY*C--KMEGFTCRC 494
G+ D SSH C +GFTCRC
Sbjct: 769 GRHDCSSHATCIDTADGFTCRC 790
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +3
Query: 435 GKEDISSHY*C--KMEGFTCRC 494
G+ D SSH C +GFTCRC
Sbjct: 185 GRHDCSSHATCIDTADGFTCRC 206
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +3
Query: 435 GKEDISSHY*C--KMEGFTCRC 494
G+ D SSH C +GFTCRC
Sbjct: 769 GRHDCSSHATCIDTADGFTCRC 790
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 103 TWTKKSPSCTWVECLPMP 156
TW+ K P+CT V C +P
Sbjct: 394 TWSSKQPNCTKVACTHLP 411
>U13876-5|AAA21176.2| 449|Caenorhabditis elegans Mammalian bystin
(adhesion protein)related protein 1 protein.
Length = 449
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 580 TGERPIYAIYHHCMLGLCQLLSN 512
T ER + ++H C+L LCQ N
Sbjct: 371 TDERDMPVLWHQCLLALCQRYKN 393
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +3
Query: 435 GKEDISSHY*C--KMEGFTCRC 494
G+ D SSH C +GFTCRC
Sbjct: 769 GRHDCSSHATCIDTADGFTCRC 790
>AF016431-2|AAC24249.2| 148|Caenorhabditis elegans Hypothetical
protein C10B5.3 protein.
Length = 148
Score = 27.9 bits (59), Expect = 7.8
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Frame = +1
Query: 361 FDASI*SSA--SLLPHVRSERLDI----PGRGRRIFLLITDARWKGLLAGVIRQHKDLII 522
FDAS+ S + + E +D+ P + ++ DA + A IRQ D+I+
Sbjct: 3 FDASVLKSVLEQFVDEIGEESVDLIEDRPRFAHAVVVVTDDATGELCQASCIRQLDDVIL 62
Query: 523 VGTTRAYNDGKWHKLDARRFLAKCSLTVDNEVLKAESNS 639
T+ A +W + +R L + LT E+L NS
Sbjct: 63 HETSVANVTSEWMDEEIQRALRE--LTESRELLDTPRNS 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,765,460
Number of Sequences: 27780
Number of extensions: 440810
Number of successful extensions: 1184
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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