Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30119
         (363 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    20   6.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    20   6.8  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    20   6.8  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory
          receptor candidate 55 protein.
          Length = 402

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -2

Query: 74 RSNYFWFSWY 45
          +S+YF+FS+Y
Sbjct: 52 KSDYFYFSFY 61


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory
          receptor candidate 11 protein.
          Length = 344

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -2

Query: 74 RSNYFWFSWY 45
          +S+YF+FS+Y
Sbjct: 52 KSDYFYFSFY 61


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 168 QKQELQRVQQEGRYLQPMKPLAPVFHSS 85
           Q+Q    +      L+P   L+P+FHS+
Sbjct: 94  QQQAGANMAAAANLLRPHPYLSPLFHSA 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,931
Number of Sequences: 336
Number of extensions: 863
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)