Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30119
         (363 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical pr...    27   4.0  
U80842-13|AAB37943.1|  208|Caenorhabditis elegans Hypothetical p...    27   5.3  
AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical ...    27   5.3  
Z67880-2|CAA91792.2|  505|Caenorhabditis elegans Hypothetical pr...    26   9.3  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    26   9.3  
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ...    26   9.3  
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.    26   9.3  

>Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical
           protein B0395.2 protein.
          Length = 467

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 107 WLQCFIPVFMDRSNYFWFSWYHS 39
           WL CF  +       F+ +W+HS
Sbjct: 302 WLNCFSEMMQFADRQFYLNWWHS 324


>U80842-13|AAB37943.1|  208|Caenorhabditis elegans Hypothetical
           protein ZC239.2 protein.
          Length = 208

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 268 WIRSRLECCINTLHWLI 318
           WIR R+   +N+ HWLI
Sbjct: 138 WIRERILNIVNSTHWLI 154


>AF039043-7|AAY86190.1|  103|Caenorhabditis elegans Hypothetical
           protein F39C12.4 protein.
          Length = 103

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 140 CCTRCSSCFWSTPCSRRMVC 199
           CCT    CF ST CS   VC
Sbjct: 53  CCTN-EECFMSTECSYSAVC 71


>Z67880-2|CAA91792.2|  505|Caenorhabditis elegans Hypothetical
           protein C34E7.1 protein.
          Length = 505

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -1

Query: 213 HLVPAQTILLEQGVLQKQELQRVQQEGRYLQPMKPLAPVFHSS 85
           H VPAQ   +++ + Q   +    Q G+Y        P +H S
Sbjct: 349 HRVPAQQAQMQRAMQQDSSMMMGNQMGQYQYSQMGQPPHYHQS 391


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = +2

Query: 131 RPSCCTRCSSCFWSTPCSRRMVCAG 205
           R  CCTRC +C     C     C G
Sbjct: 105 RTCCCTRCCTCCRPCCCGCGCGCCG 129


>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
            protein.
          Length = 1829

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = -1

Query: 189  LLEQGVLQKQELQRVQQEGRYLQP--MKPLAPVF 94
            L+EQ ++ +++L+R     R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
          Length = 1829

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = -1

Query: 189  LLEQGVLQKQELQRVQQEGRYLQP--MKPLAPVF 94
            L+EQ ++ +++L+R     R+LQP  + PLA  F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,888,646
Number of Sequences: 27780
Number of extensions: 83612
Number of successful extensions: 243
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)