Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30118
         (694 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.4  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   8.4  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   8.4  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 458 IEDLEILNDFNSYFNR 505
           I DL + +D N Y NR
Sbjct: 116 ISDLFVFDDLNDYINR 131


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -2

Query: 570 TTYKLRIVPLNEI 532
           TTY LRIV  NEI
Sbjct: 946 TTYHLRIVAENEI 958


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = +2

Query: 299 TAVVSCQSKCNLKLGSVNR 355
           T +  C  +CN  +  +NR
Sbjct: 469 TPIYECNKRCNCDIDCINR 487


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 70  YIRYHNSYNLFNYSSQY*VLFI 5
           Y  Y+N+YN +N    Y + +I
Sbjct: 94  YNNYNNNYNNYNKKLYYNINYI 115


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -2

Query: 636 GV*YVISDFF*NFKSCILRYTKTTYKLRIVPLNEIV 529
           G+ ++ISD    F    L YT   +++  +P+ + +
Sbjct: 373 GLXWIISDRMPVFLLXTLNYTDVXFRILTMPVRDAI 408


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,167
Number of Sequences: 438
Number of extensions: 3041
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)