Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30116
         (469 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98880-3|CAI42375.1| 2341|Homo sapiens v-ros UR2 sarcoma virus o...    29   8.0  
Z98880-2|CAI42374.1| 2347|Homo sapiens v-ros UR2 sarcoma virus o...    29   8.0  
M34353-1|AAA60278.1| 2347|Homo sapiens ROS1 protein.                   29   8.0  
AL132671-5|CAI23379.1| 2341|Homo sapiens v-ros UR2 sarcoma virus...    29   8.0  
AL132671-4|CAI23378.1| 2347|Homo sapiens v-ros UR2 sarcoma virus...    29   8.0  

>Z98880-3|CAI42375.1| 2341|Homo sapiens v-ros UR2 sarcoma virus
            oncogene homolog 1 (avian) protein.
          Length = 2341

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +1

Query: 145  WLITEHNATQ*HTMPNYAEA*LSIMPHNALLCCNWKTPLRTN 270
            W    H  T    M N  E   S++P N  L  NWK PL  N
Sbjct: 1638 WCTESHPVTV--EMFNTPEKPYSLVPENTSLQFNWKAPLNVN 1677


>Z98880-2|CAI42374.1| 2347|Homo sapiens v-ros UR2 sarcoma virus
            oncogene homolog 1 (avian) protein.
          Length = 2347

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +1

Query: 145  WLITEHNATQ*HTMPNYAEA*LSIMPHNALLCCNWKTPLRTN 270
            W    H  T    M N  E   S++P N  L  NWK PL  N
Sbjct: 1644 WCTESHPVTV--EMFNTPEKPYSLVPENTSLQFNWKAPLNVN 1683


>M34353-1|AAA60278.1| 2347|Homo sapiens ROS1 protein.
          Length = 2347

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +1

Query: 145  WLITEHNATQ*HTMPNYAEA*LSIMPHNALLCCNWKTPLRTN 270
            W    H  T    M N  E   S++P N  L  NWK PL  N
Sbjct: 1644 WCTESHPVTV--EMFNTPEKPYSLVPENTSLQFNWKAPLNVN 1683


>AL132671-5|CAI23379.1| 2341|Homo sapiens v-ros UR2 sarcoma virus
            oncogene homolog 1 (avian) protein.
          Length = 2341

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +1

Query: 145  WLITEHNATQ*HTMPNYAEA*LSIMPHNALLCCNWKTPLRTN 270
            W    H  T    M N  E   S++P N  L  NWK PL  N
Sbjct: 1638 WCTESHPVTV--EMFNTPEKPYSLVPENTSLQFNWKAPLNVN 1677


>AL132671-4|CAI23378.1| 2347|Homo sapiens v-ros UR2 sarcoma virus
            oncogene homolog 1 (avian) protein.
          Length = 2347

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +1

Query: 145  WLITEHNATQ*HTMPNYAEA*LSIMPHNALLCCNWKTPLRTN 270
            W    H  T    M N  E   S++P N  L  NWK PL  N
Sbjct: 1644 WCTESHPVTV--EMFNTPEKPYSLVPENTSLQFNWKAPLNVN 1683


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,837,552
Number of Sequences: 237096
Number of extensions: 785866
Number of successful extensions: 1278
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)