Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30114
(716 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g05780.1 68418.m00636 26S proteasome non-ATPase regulatory su... 125 3e-29
At3g11270.1 68416.m01370 26S proteasome non-ATPase regulatory su... 122 3e-28
At2g39990.1 68415.m04914 eukaryotic translation initiation facto... 58 8e-09
At5g56280.1 68418.m07024 COP9 signalosome subunit 6 / CSN subuni... 42 3e-04
At4g26430.1 68417.m03803 COP9 signalosome subunit 6 / CSN subuni... 42 5e-04
At5g23540.1 68418.m02763 26S proteasome regulatory subunit, puta... 38 0.005
At1g10840.1 68414.m01246 eukaryotic translation initiation facto... 31 0.58
At3g11010.1 68416.m01329 disease resistance family protein / LRR... 31 1.0
At2g15080.2 68415.m01719 disease resistance family protein conta... 31 1.0
At2g15080.1 68415.m01718 disease resistance family protein conta... 31 1.0
At5g25910.1 68418.m03077 disease resistance family protein conta... 30 1.8
At3g28890.1 68416.m03606 leucine-rich repeat family protein cont... 30 1.8
At3g05650.1 68416.m00629 disease resistance family protein conta... 30 1.8
At2g33080.1 68415.m04056 leucine-rich repeat family protein cont... 30 1.8
At5g05850.1 68418.m00643 leucine-rich repeat family protein cont... 29 2.3
At1g22920.2 68414.m02865 COP9 signalosome subunit 5B / CSN subun... 29 2.3
At1g22920.1 68414.m02864 COP9 signalosome subunit 5B / CSN subun... 29 2.3
At1g71230.1 68414.m08220 COP9 signalosome subunit 5A / CSN subun... 29 3.1
At3g25020.1 68416.m03127 disease resistance family protein conta... 29 4.1
At3g11080.1 68416.m01339 disease resistance family protein conta... 29 4.1
At3g24900.1 68416.m03122 disease resistance family protein / LRR... 28 7.1
At3g11520.1 68416.m01404 cyclin, putative (CYC2) similar to cycl... 28 7.1
At3g05660.1 68416.m00630 disease resistance family protein conta... 28 7.1
At5g27060.1 68418.m03229 disease resistance family protein conta... 27 9.4
At5g06940.1 68418.m00784 leucine-rich repeat family protein cont... 27 9.4
At3g25010.1 68416.m03126 disease resistance family protein conta... 27 9.4
At3g24954.1 68416.m03124 leucine-rich repeat family protein cont... 27 9.4
At3g11330.1 68416.m01378 leucine-rich repeat family protein 27 9.4
At2g33060.1 68415.m04054 leucine-rich repeat family protein cont... 27 9.4
At2g33050.1 68415.m04053 leucine-rich repeat family protein cont... 27 9.4
At2g33020.1 68415.m04047 leucine-rich repeat family protein cont... 27 9.4
At1g71150.1 68414.m08210 expressed protein ; expression support... 27 9.4
>At5g05780.1 68418.m00636 26S proteasome non-ATPase regulatory
subunit 7, putative / 26S proteasome regulatory subunit
S12, putative / MOV34 protein, putative contains
similarity to 26s proteasome regulatory subunit s12
(proteasome subunit p40) (mov34 protein) SP:P26516 from
[Mus musculus]; contains Pfam profile PF01398:
Mov34/MPN/PAD-1 family
Length = 308
Score = 125 bits (301), Expect = 3e-29
Identities = 57/107 (53%), Positives = 80/107 (74%), Gaps = 3/107 (2%)
Frame = +2
Query: 221 NRESETSSRCSMGCW---RAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKK 391
NR ++ SS+ +G ++GV+DV+NS+AVPF+EDDKD S+WFLDH+Y E+M+ MFK+
Sbjct: 32 NRVAKDSSKRVVGVLLGSSSRGVVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFHMFKR 91
Query: 392 VNAREKVVGWYHTGPKLHQNDIAINELIRRYCPNSVLVILMLNLKIL 532
+NA+E VVGWY TGPKL +ND+ ++ L Y PN VLVI+ + K L
Sbjct: 92 INAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKEL 138
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +1
Query: 511 DAKPKDLGLPTEAYQAVEEVHDDGTPTS-RTFEHVPSEIXXXXXXXXXXXHLLRDIKGTT 687
D +PK+LG+PT+AY AVEEV ++ T S + F HV +EI HLLRD+K TT
Sbjct: 132 DVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTT 191
Query: 688 VGSLSQRIT 714
+ +L+ +T
Sbjct: 192 ISTLATEVT 200
>At3g11270.1 68416.m01370 26S proteasome non-ATPase regulatory
subunit 7, putative / 26S proteasome regulatory subunit
S12, putative / MOV34 protein, putative contains
similarity to 26S proteasome regulatory subunit S12
(MOV34) SP:P26516 from [Mus musculus]
Length = 310
Score = 122 bits (293), Expect = 3e-28
Identities = 50/88 (56%), Positives = 70/88 (79%)
Frame = +2
Query: 269 AKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGPKLHQ 448
++G +DV+NS+AVPF+EDDKD S+WFLDH+Y E+M+ MFK++NA+E +VGWY TGPKL +
Sbjct: 51 SRGTVDVTNSYAVPFEEDDKDTSIWFLDHNYHESMFHMFKRINAKEHIVGWYSTGPKLRE 110
Query: 449 NDIAINELIRRYCPNSVLVILMLNLKIL 532
ND+ ++ L Y PN VLVI+ + K L
Sbjct: 111 NDLDVHALFNGYVPNPVLVIIDVQPKEL 138
Score = 68.1 bits (159), Expect = 5e-12
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +1
Query: 511 DAKPKDLGLPTEAYQAVEEVHDDGTPTS-RTFEHVPSEIXXXXXXXXXXXHLLRDIKGTT 687
D +PK+LG+PT+AY AVEEV ++ T S + F HVP+EI HLLRD+K TT
Sbjct: 132 DVQPKELGIPTKAYYAVEEVKENATQKSQQVFVHVPTEIAAHEVEEIGVEHLLRDVKDTT 191
Query: 688 VGSLSQRIT 714
+ +L+ +T
Sbjct: 192 ISTLATEVT 200
>At2g39990.1 68415.m04914 eukaryotic translation initiation factor 3
subunit 5 / eIF-3 epsilon / eIF3f (TIF3F1) identical to
SP|O04202 Eukaryotic translation initiation factor 3
subunit 5 (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f)
{Arabidopsis thaliana}; contains Pfam profile PF01398:
Mov34/MPN/PAD-1 family
Length = 293
Score = 57.6 bits (133), Expect = 8e-09
Identities = 28/75 (37%), Positives = 41/75 (54%)
Frame = +2
Query: 275 GVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGPKLHQND 454
G +D+ NS+AVP +E +V D DY NM KVN++E +VGWY TG ++
Sbjct: 64 GTVDIRNSYAVPHNESSDQVAV---DIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGS 120
Query: 455 IAINELIRRYCPNSV 499
I++ R PN +
Sbjct: 121 SLIHDFYAREVPNPI 135
>At5g56280.1 68418.m07024 COP9 signalosome subunit 6 / CSN subunit 6
(CSN6A) identical to CSN complex subunit 6A [Arabidopsis
thaliana] GI:18056665, COP9 complex subunit 6
[Arabidopsis thaliana] GI:15809663; contains Pfam
profile PF01398: Mov34/MPN/PAD-1 family; identical to
cDNA CSN complex subunit 6A (CSN6A) GI:18056664
Length = 317
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +2
Query: 248 CSMGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVVGWYH 427
C +G R + V ++ NSF + +D S LD +LE ++KKV ++GWY
Sbjct: 61 CVIGVQRGRTV-EIFNSFELLYDP-----STQTLDRSFLEKKQELYKKVFPDFYILGWYS 114
Query: 428 TGPKLHQNDIAINELIRRYCPNSVLVIL 511
TG ++D+ I++ + + V V+L
Sbjct: 115 TGSDAEESDMHIHKALMDINESPVYVLL 142
>At4g26430.1 68417.m03803 COP9 signalosome subunit 6 / CSN subunit 6
(CSN6B) identical to COP9 signalosome subunit 6
[Arabidopsis thaliana] GI:17940314, CSN complex subunit
6B [Arabidopsis thaliana] GI:18056667; contains Pfam
profile PF01398: Mov34/MPN/PAD-1 family; supporting cDNA
gi|17940313|gb|AF434762.1|AF434762; identical to cDNA
CSN complex subunit 6B (CSN6B) GI:18056666
Length = 317
Score = 41.5 bits (93), Expect = 5e-04
Identities = 27/88 (30%), Positives = 46/88 (52%)
Frame = +2
Query: 248 CSMGCWRAKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVVGWYH 427
C +G R + V ++ NSF + FD ++ LD +LE ++KKV V+GWY
Sbjct: 61 CVIGLQRGRTV-EIFNSFELIFDP-----ALDTLDRSFLEKKQELYKKVFPDFYVLGWYS 114
Query: 428 TGPKLHQNDIAINELIRRYCPNSVLVIL 511
TG ++D+ I++ + + V V+L
Sbjct: 115 TGSDATESDMHIHKALMDINESPVYVLL 142
>At5g23540.1 68418.m02763 26S proteasome regulatory subunit,
putative similar to 26S proteasome-associated pad1
homolog [Homo sapiens] GI:1923256, 26S proteasome,
non-ATPase subunit [Mus musculus] GI:2505940; contains
Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 308
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 287 VSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGP 436
V + FA+P + SV +DH + NM M K+ E VVGWYH+ P
Sbjct: 68 VVDVFAMP--QSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHP 115
>At1g10840.1 68414.m01246 eukaryotic translation initiation factor 3
subunit 3 / eIF-3 gamma / eIF3h (TIF3H1) identical to
SP|Q9C5Z2 Eukaryotic translation initiation factor 3
subunit 3 (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h)
{Arabidopsis thaliana}; contains Pfam profile PF01398:
Mov34/MPN/PAD-1 family
Length = 337
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 278 VLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVVGWYHT 430
VL+V+N F PF D D+ + +Y M ++VN VGWY +
Sbjct: 59 VLEVTNCF--PFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQS 107
>At3g11010.1 68416.m01329 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 894
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHL 462
P+S+GL +L VLNL NNA H+
Sbjct: 720 PKSIGLLKELHVLNLSNNAFTGHI 743
>At2g15080.2 68415.m01719 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 983
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHLS 459
P+S+GL +L VLNL NNA H++
Sbjct: 811 PKSIGLLKELHVLNLSNNALSGHIA 835
>At2g15080.1 68415.m01718 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 983
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHLS 459
P+S+GL +L VLNL NNA H++
Sbjct: 811 PKSIGLLKELHVLNLSNNALSGHIA 835
>At5g25910.1 68418.m03077 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-5D [Lycopersicon
esculentum] gi|3894393|gb|AAC78596;
Length = 811
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHL 462
PRS+GL +L VLNL NN H+
Sbjct: 643 PRSVGLLKELHVLNLSNNGFTGHI 666
>At3g28890.1 68416.m03606 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-0B
[Lycopersicon esculentum] gi|3894387|gb|AAC78593
Length = 711
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHL 462
P+S+GL +L VLNL NNA H+
Sbjct: 537 PKSIGLLKELLVLNLSNNAFTGHI 560
>At3g05650.1 68416.m00629 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-4A protein
[Lycopersicon esculentum] gi|3097197|emb|CAA73187
Length = 868
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHL 462
PRS+GL +L VLNL +NA H+
Sbjct: 693 PRSIGLLKELHVLNLSSNAFTGHI 716
>At2g33080.1 68415.m04056 leucine-rich repeat family protein
contains leucine rich-repeat domain Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 740
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTH--LSLCHSDEV 438
P+S+GL +L LNL NNA H LSL ++ E+
Sbjct: 619 PKSIGLLKELIALNLSNNAFTCHIPLSLANATEL 652
>At5g05850.1 68418.m00643 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeat domains;
similar to (SP:Q9UQ13) Leucine-rich repeat protein
SHOC-2 (Ras-binding protein Sur-8) (SP:Q9UQ13) {Homo
sapiens}
Length = 506
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHL--SLCHSDEV*VL 429
P S+GL SKL++LN+ N LT L S+CH + VL
Sbjct: 266 PDSIGLLSKLKILNVSCNK-LTTLPDSICHCGSLVVL 301
>At1g22920.2 68414.m02865 COP9 signalosome subunit 5B / CSN subunit
5B (CSN5B) / c-JUN coactivator protein AJH1, putative
(AJH1) COP9 complex subunit CSN5-1; identical to
Arabidopsis homologs of a c-Jun coactivator AJH1
GI:3641314 from [Arabidopsis thaliana]; identical to
cDNA CSN complex subunit 5B (CSN5B) GI:18056662;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 351
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 287 VSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGP 436
V ++FA+P + + + ++Y+ K E VVGWYH+ P
Sbjct: 96 VMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHP 145
>At1g22920.1 68414.m02864 COP9 signalosome subunit 5B / CSN subunit
5B (CSN5B) / c-JUN coactivator protein AJH1, putative
(AJH1) COP9 complex subunit CSN5-1; identical to
Arabidopsis homologs of a c-Jun coactivator AJH1
GI:3641314 from [Arabidopsis thaliana]; identical to
cDNA CSN complex subunit 5B (CSN5B) GI:18056662;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 357
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 287 VSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGP 436
V ++FA+P + + + ++Y+ K E VVGWYH+ P
Sbjct: 96 VMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHP 145
>At1g71230.1 68414.m08220 COP9 signalosome subunit 5A / CSN subunit
5A (CSN5A) / c-JUN coactivator protein AJH2, putative
(AJH2) COP9 complex subunit CSN5-2; identical to c-Jun
coactivator protein AJH2 GI:3641312 from [Arabidopsis
thaliana]; identical to cDNA CSN complex subunit 5A
(CSN5A) GI:18056660; contains Pfam profile PF01398:
Mov34/MPN/PAD-1 family
Length = 358
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 287 VSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAR-EKVVGWYHTGP 436
V ++FA+P + + + ++Y+ Y K+ R E VVGWYH+ P
Sbjct: 96 VMDAFALPVEGTETRVNAQDDAYEYMVE-YSQTNKLAGRLENVVGWYHSHP 145
>At3g25020.1 68416.m03127 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 890
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTH--LSLCHSDEV*VLCGTSQQL 408
P SLGL L LNL NNA H LSL + ++ L +S QL
Sbjct: 717 PESLGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQL 760
>At3g11080.1 68416.m01339 disease resistance family protein contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 943
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA 477
P+S+GL +L VLNL NNA
Sbjct: 771 PKSIGLLKELLVLNLSNNA 789
>At3g24900.1 68416.m03122 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 884
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTH--LSLCHSDEV*VLCGTSQQL 408
P S+GL L LNL NNA H LSL + ++ L +S QL
Sbjct: 719 PESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQL 762
>At3g11520.1 68416.m01404 cyclin, putative (CYC2) similar to cyclin
[Arabidopsis thaliana] GI:1360646; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain; identical to cDNA cyclin box
(cyc2) partial cds GI:456019
Length = 414
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 278 VLDV-SNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNAREKVVGWYHTGPKLHQ 448
VLD S + + D D DK +Y+E+MY +K+V K + HT P++ +
Sbjct: 131 VLDARSKAASKTLDIDYVDKENDLAAVEYVEDMYIFYKEVVNESKPQMYMHTQPEIDE 188
>At3g05660.1 68416.m00630 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 883
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHL 462
PRS+GL +L +LNL +N H+
Sbjct: 704 PRSIGLLKELHILNLSSNGFTGHI 727
>At5g27060.1 68418.m03229 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 957
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHL 462
P+S+GL +L VL+L NNA H+
Sbjct: 783 PKSIGLLKELLVLSLSNNAFSGHM 806
>At5g06940.1 68418.m00784 leucine-rich repeat family protein
contains protein kinase domain, Pfam:PF00069; contains
leucine-rich repeats, Pfam:PF00560
Length = 872
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNN 480
P LGL LQVLNLG+N
Sbjct: 164 PEDLGLLFNLQVLNLGSN 181
>At3g25010.1 68416.m03126 disease resistance family protein contains
leucine rich-repeat (LRR) domains (23 copies)
Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 881
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHLSL 456
P S+GL L LNL NNA H+ L
Sbjct: 718 PESIGLLKALIALNLSNNAFTGHIPL 743
>At3g24954.1 68416.m03124 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 225
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHLSL 456
P S+GL L LNL NNA H+ L
Sbjct: 60 PESIGLLKALIALNLSNNAFTGHIPL 85
>At3g11330.1 68416.m01378 leucine-rich repeat family protein
Length = 499
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHL--SLCHSDEV*VL 429
P S+GL SKL++LN+ N LT L S+C + +L
Sbjct: 260 PDSIGLLSKLKILNVSTNK-LTSLPDSICRCGSLVIL 295
>At2g33060.1 68415.m04054 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-0B
[Lycopersicon esculentum] gi|3894387|gb|AAC78593
Length = 808
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHLSL 456
P S+GL L LNL NNA H+ L
Sbjct: 619 PESIGLLKALIALNLSNNAFTGHIPL 644
>At2g33050.1 68415.m04053 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 800
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHLSL 456
P S+GL +L LNL NNA H+ +
Sbjct: 609 PESIGLLKELIALNLSNNAFTGHIPM 634
>At2g33020.1 68415.m04047 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 864
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 533 PRSLGLASKLQVLNLGNNA*LTHLSL 456
P S+GL L LNL NNA H+ L
Sbjct: 706 PESIGLLKALIALNLSNNAFTGHIPL 731
>At1g71150.1 68414.m08210 expressed protein ; expression supported
by MPSS
Length = 351
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +3
Query: 222 IGNQKRVVGVLWVVGE-PKAS*MYRTASQF 308
+ Q +VG+LW+ GE PKA M T +
Sbjct: 50 LSKQATIVGMLWITGEPPKAEAMKETMEAY 79
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,276,809
Number of Sequences: 28952
Number of extensions: 282321
Number of successful extensions: 837
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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