Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30113
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    31   0.010
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    31   0.010
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.2  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +2

Query: 308 NLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNL 469
           NL K       K     +   +  PGE+L ++G +G GK+T L  L      NL
Sbjct: 79  NLIKRKDSPVQKKHILKNVFGVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNL 132


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 0.010
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +2

Query: 308 NLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNL 469
           NL K       K     +   +  PGE+L ++G +G GK+T L  L      NL
Sbjct: 79  NLIKRKDSPVQKKHILKNVFGVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNL 132


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 685 AFYILQIGFSFHLFC 641
           A+Y+ + G S+HL C
Sbjct: 574 AYYVCRSGLSYHLSC 588



 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 719  RHFPEESCSGLHVPCVH 769
            +++P ESCS  +V CV+
Sbjct: 1211 QYYPHESCSSFYV-CVN 1226


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 747 VCMCHVC 767
           VC+CHVC
Sbjct: 923 VCICHVC 929


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 233 LRDGGYLVIRSDFDA 189
           L D GY VI S++DA
Sbjct: 457 LLDNGYRVILSNYDA 471


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/22 (27%), Positives = 11/22 (50%)
 Frame = +2

Query: 50  RNVSTKRSRGNRQANSYRYCEC 115
           RN+   R +G  +   + +C C
Sbjct: 559 RNLDLNRPQGGEELAQFNFCGC 580


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 682 FYILQIGFSFHLFCLIVDRQFPLQL 608
           FY + I F+ HL  L+    F + L
Sbjct: 59  FYCVSITFNVHLLFLLCSGYFTVHL 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,702
Number of Sequences: 336
Number of extensions: 4093
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)