Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30112
         (527 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   0.95 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   5.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   5.1  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.9  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   8.9  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 223 FQPLLLCIRQHACQDQCRLF 164
           F  +L  + +HAC + CR+F
Sbjct: 266 FNTVLELMPKHACSEYCRVF 285


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 33   AGHSRQISTYSSYHEYEHRWQTQGY-VCDDGYQRCWP 140
            AG   + + + +Y+E  H  +TQG+ V  D  +R  P
Sbjct: 1667 AGEYTRAAGFLAYYEICHNIKTQGWTVVQDPNRRMGP 1703



 Score = 21.4 bits (43), Expect = 5.1
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +3

Query: 15   KLNQNVAGHSRQISTYSSYHEYEHRWQTQGYVCDDGYQRCW 137
            +L  N A  +R I     + E   +W   G   D  Y +CW
Sbjct: 1488 RLVNNPAARARFIKHVLQFLE---KWNFDGLDLDWEYPKCW 1525


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 45  RQISTYSSYHEYEHRWQTQGYVCDDG 122
           RQ+  +      +H+ QT G   DDG
Sbjct: 46  RQVKVWFQNRRMKHKRQTLGKQGDDG 71


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 45  RQISTYSSYHEYEHRWQTQGYVCDDG 122
           RQ+  +      +H+ QT G   DDG
Sbjct: 177 RQVKVWFQNRRMKHKRQTLGKQGDDG 202


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 297 QYPFAYLGTSLVSY 256
           Q P+ Y GT+ VSY
Sbjct: 303 QVPYKYDGTNWVSY 316


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 166 KADIDLDKRAGECTEEEVEK 225
           K DI  DK+A +    EVEK
Sbjct: 77  KKDIRADKKALQKLRREVEK 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,597
Number of Sequences: 336
Number of extensions: 2593
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)