Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30111
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    25   0.91 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   6.4  

>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 14/58 (24%), Positives = 25/58 (43%)
 Frame = +1

Query: 34  ERTLPKTHSSTLESTIIKAGNVTFGQLLVNQKIELLTLYSIGSHKTLLNDILDK*QVK 207
           E TLP       ++     GN    +  VN  +++  LY    ++ L++   +K  VK
Sbjct: 70  EETLPSLPDRKFQTVTSIEGNTFKTETQVNDSLKVTRLYEFSDNELLVHISTNKSDVK 127


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 295 HFFVQM-HRLPPLIIDDSLSFYVKLTQYYW 381
           HF+  + H  PP ++ +SL+F     ++Y+
Sbjct: 230 HFYFMLNHNYPPFMLSNSLNFPQIRGEFYF 259


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 295 HFFVQM-HRLPPLIIDDSLSFYVKLTQYYW 381
           HF+  + H  PP ++ +SL+F     ++Y+
Sbjct: 230 HFYFMLNHNYPPFMLSNSLNFPQIRGEFYF 259


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 25  TLGERTLPKTHSSTLESTIIKAGNVTFGQLLVNQKIELLTLYSI 156
           TLG R L           +  +GNV  G LLV   ++ L+L +I
Sbjct: 219 TLGRRILRLDAIDEASIAVGASGNVFAGYLLVFIGLQSLSLTNI 262


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,876
Number of Sequences: 438
Number of extensions: 3101
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)