Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30110
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    26   1.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    26   1.3  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 22/76 (28%), Positives = 34/76 (44%)
 Frame = +1

Query: 439 TSSSTLQRSVNYRQKQQDRQCQAHFNKATVCAX*TCSMKPPKRAPLPSNSTKTT*RLF*D 618
           T+SS+   S + +   Q +Q Q H       +    S +P   +   S+S+  T      
Sbjct: 9   TASSSTTSSSSSKPSPQQQQ-QLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSG 67

Query: 619 EPNATRSSANTRRPLK 666
           EP A  SS+N+RR  K
Sbjct: 68  EPRAAGSSSNSRRNSK 83


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 22/76 (28%), Positives = 34/76 (44%)
 Frame = +1

Query: 439 TSSSTLQRSVNYRQKQQDRQCQAHFNKATVCAX*TCSMKPPKRAPLPSNSTKTT*RLF*D 618
           T+SS+   S + +   Q +Q Q H       +    S +P   +   S+S+  T      
Sbjct: 9   TASSSTTSSSSSKPSPQQQQ-QLHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSG 67

Query: 619 EPNATRSSANTRRPLK 666
           EP A  SS+N+RR  K
Sbjct: 68  EPRAAGSSSNSRRNSK 83


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,821
Number of Sequences: 2352
Number of extensions: 11483
Number of successful extensions: 85
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)