Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30110
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 36 0.027
U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical pr... 34 0.11
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 33 0.14
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 32 0.44
Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical pr... 31 1.0
U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z92832-6|CAB07375.2| 572|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical ... 29 4.1
AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical ... 29 4.1
U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine... 28 5.4
Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical ... 28 7.1
Z48334-6|CAA88313.1| 655|Caenorhabditis elegans Hypothetical pr... 27 9.4
U00035-4|AAA50646.2| 482|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF314467-1|AAG41979.1| 655|Caenorhabditis elegans APC6 protein. 27 9.4
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 353 KAVE--TYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALTIDKNN 487
KA E Y +L +++K +GNE FK G + A+ YNEA+ D N
Sbjct: 127 KAAERLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN 173
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 90 DYRRVVFCMDRCLDYSPSCTKCKLTKAECLALLGRCQEAQEIANDLLRLDSQDTE 254
+++R + D C+ K + KA CL + +AQ D L++D + E
Sbjct: 189 EFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEE 243
>U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical
protein C33H5.8 protein.
Length = 297
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/30 (40%), Positives = 24/30 (80%)
Frame = +2
Query: 380 KLLKQKKEEGNEAFKMGRWQQALALYNEAL 469
K+ ++ KE+GNEAFK ++ +A+ +Y+++L
Sbjct: 6 KIAQRLKEQGNEAFKKKKYHKAMTIYSKSL 35
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 320 QQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQAL 448
++ L+LNPDHKK +YK K + + + + + W + L
Sbjct: 233 RECLKLNPDHKKCYTSYKSLKKIVKSLDSMKASIEQQEWTKCL 275
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 600 VKALLRRAKCYTELGEYEEAVKDYER 677
V+ L++RA+ Y EY+ A+ DYE+
Sbjct: 326 VETLIQRAEAYMADEEYDMAIADYEK 351
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +2
Query: 299 EQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALTID 478
E++ ++ L+LNPDHK YK+ + + + E + + W L + + D
Sbjct: 225 EESLNVIRECLKLNPDHKSCYPFYKKLRKVVKSLESMKKKVENSDWMACLEEGQKTMKFD 284
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 287 EDRDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLK 391
ED D A + +Q+ +NPDH++A E + AK LK
Sbjct: 339 EDYDS-AIEDYQKATEVNPDHREAKEGLEHAKRLK 372
Score = 29.1 bits (62), Expect = 3.1
Identities = 25/86 (29%), Positives = 34/86 (39%)
Frame = +2
Query: 248 YRAIYVRGLCLYFEDRDEQAFKHFQQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKM 427
Y+AIY R R + A ++VL L PD A + + GN K
Sbjct: 60 YQAIYRRATTYLAMGRGKAAIVDLERVLELKPDFYGA------------RIQRGNILLKQ 107
Query: 428 GRWQQALALYNEALTIDKNNRTVNAK 505
G + A A +N L D +N V K
Sbjct: 108 GELEAAEADFNIVLNHDSSNNDVQEK 133
>Z71266-7|CAA95845.1| 987|Caenorhabditis elegans Hypothetical protein
R06C7.8 protein.
Length = 987
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 383 LLKQKKEEGNEAFKMGRWQQALALYNEALTIDKNNR 490
L+K E NE F+ W+QA++ +NEA + N +
Sbjct: 952 LIKSFSEIWNEKFEASGWRQAVSKFNEACDLAANQK 987
>U28739-8|AAB93452.2| 419|Caenorhabditis elegans Hypothetical
protein C17G10.2 protein.
Length = 419
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +2
Query: 398 KEEGNEAFKMGRWQQALALYNEALTIDKNNRTVNAKLTSTRPPSVRXEHAQ*NRRSVHRC 577
KEEGN+ FK +++ A Y+ + + +R +NA L R + +H R ++ C
Sbjct: 99 KEEGNKHFKFKKYRWATDCYSNGIKENSPDRKLNAVLYFNR--AAAQKHLGNLRSAIKDC 156
Query: 578 PRTRR 592
R+
Sbjct: 157 SMGRK 161
>Z92832-6|CAB07375.2| 572|Caenorhabditis elegans Hypothetical
protein F31D4.7 protein.
Length = 572
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 219 NDLLRLDSQDTELYTSGDYVCILKTETNKRLNTF 320
N R+D+ +++ + DY+ +K T++RL TF
Sbjct: 183 NRTARVDAMMKKIFNNSDYLIYIKGNTSQRLTTF 216
>AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical
protein ZK484.4a protein.
Length = 919
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 30 RALETLKRLHEDAQ---RALDANDYRRVVFCMDRCLDYSPSCTKCKLTKAECLALLGRCQ 200
+A E L +L E A R++ + V+F + SP+ TKC + +LL +
Sbjct: 523 KARENLNKLLEKANTPIRSVTRPIRKSVLFGSAGSMSSSPATTKCARGTSSRTSLLNKFS 582
Query: 201 EAQEIANDLLRLDSQD 248
E +E L +D+ D
Sbjct: 583 EMEEKKKSPLAVDTSD 598
>AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical
protein ZK484.4b protein.
Length = 873
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 30 RALETLKRLHEDAQ---RALDANDYRRVVFCMDRCLDYSPSCTKCKLTKAECLALLGRCQ 200
+A E L +L E A R++ + V+F + SP+ TKC + +LL +
Sbjct: 523 KARENLNKLLEKANTPIRSVTRPIRKSVLFGSAGSMSSSPATTKCARGTSSRTSLLNKFS 582
Query: 201 EAQEIANDLLRLDSQD 248
E +E L +D+ D
Sbjct: 583 EMEEKKKSPLAVDTSD 598
>U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small
glutamine-rich tetratricorepeat protein protein 1
protein.
Length = 337
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 398 KEEGNEAFKMGRWQQALALYNEALTIDKN 484
KEEGN+ K +++ A+ YN A+ ++++
Sbjct: 109 KEEGNDLMKASQFEAAVQKYNAAIKLNRD 137
>Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical
protein T05A10.3 protein.
Length = 406
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +2
Query: 320 QQVLRLNPDHKKAVETYKRAKLLKQKKEEGNEAFKMGRWQQALALYNEALTIDKNNRTVN 499
++ LRL + ++ E KR + +++++EE + ++ R ++ L +E ++ R
Sbjct: 255 EESLRLE-EIRRIEEEKKRIEEIRRQEEE-QQRIELERREEERRLESERRAEEERKREEE 312
Query: 500 AKLTSTRPPSVRXEHAQ*NRRSVHRCPRTRRKLRKGSSE 616
AKL R EH + HR + R++ K E
Sbjct: 313 AKLQEQRRREQEDEHKR-RMEEYHRREQERQEALKRREE 350
>AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical
protein Y39B6A.2 protein.
Length = 496
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 594 NYVKALLRRAKCYTELGEYEEAVKDYE 674
+YVK RRA LG +++A+ DY+
Sbjct: 94 SYVKGFYRRATANMALGRFKKALTDYQ 120
>Z48334-6|CAA88313.1| 655|Caenorhabditis elegans Hypothetical
protein F10B5.6 protein.
Length = 655
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 54 LHEDAQRALDANDYRRVVFCMDRCLDYSPSCTKCKLTKAECLALLGRCQEAQEIANDLLR 233
L E AQRA + +R D D +C + + CL +L + E+ + L+
Sbjct: 277 LMERAQRAYEMGRFRETKKITDELFDLFGPHPECIILRIHCLTMLKDSRSLLELGHQLVS 336
Query: 234 LD 239
D
Sbjct: 337 DD 338
>U00035-4|AAA50646.2| 482|Caenorhabditis elegans Hypothetical
protein R01H2.4 protein.
Length = 482
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 445 SSTLQRSVNYRQKQQDRQCQAHFNKATVCAX*TCSMKPPK 564
SS Q S N R++++D CQ NKA+ S PK
Sbjct: 152 SSKAQSSGNCRKQKKDEACQTGNNKASASLIPVLSSPVPK 191
>AF314467-1|AAG41979.1| 655|Caenorhabditis elegans APC6 protein.
Length = 655
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +3
Query: 54 LHEDAQRALDANDYRRVVFCMDRCLDYSPSCTKCKLTKAECLALLGRCQEAQEIANDLLR 233
L E AQRA + +R D D +C + + CL +L + E+ + L+
Sbjct: 277 LMERAQRAYEMGRFRETKKITDELFDLFGPHPECIILRIHCLTMLKDSRSLLELGHQLVS 336
Query: 234 LD 239
D
Sbjct: 337 DD 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,853,686
Number of Sequences: 27780
Number of extensions: 272833
Number of successful extensions: 862
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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