Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30107
(776 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 119 2e-27
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 119 2e-27
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 119 2e-27
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 119 2e-27
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 119 2e-27
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 53 2e-07
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 53 2e-07
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 31 0.64
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 30 1.5
At5g65910.1 68418.m08296 BSD domain-containing protein contains ... 30 2.0
At4g15610.1 68417.m02381 integral membrane family protein contai... 30 2.0
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 30 2.0
At2g41700.1 68415.m05151 ABC transporter family protein similar ... 30 2.0
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 29 2.6
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 29 2.6
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 29 2.6
At2g17820.1 68415.m02064 histidine kinase 1 99% identical to GP:... 29 2.6
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 3.4
At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 4.5
At5g57160.1 68418.m07140 DNA ligase IV identical to DNA ligase I... 28 6.0
At3g62680.1 68416.m07041 proline-rich family protein contains pr... 28 6.0
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim... 28 6.0
At4g36550.1 68417.m05190 U-box domain-containing protein low sim... 28 7.9
At2g29050.1 68415.m03531 rhomboid family protein contains PFAM d... 28 7.9
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 119 bits (287), Expect = 2e-27
Identities = 56/89 (62%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 ELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAA 432
EL+MKSI+PVVMAG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL+A
Sbjct: 49 ELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSA 108
Query: 433 GFAIGIVGDAGVRGTAQQPRLFVGMILFL 519
G AIGIVGDAGVR AQQP+LFVGMIL L
Sbjct: 109 GMAIGIVGDAGVRANAQQPKLFVGMILIL 137
Score = 55.2 bits (127), Expect = 5e-08
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +2
Query: 143 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAA 238
PFFG +GAA+A++FS +GAAYGTAKSG G+A+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVAS 42
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3
Query: 510 LILIFAEVLGLYGLIVAIYL 569
LILIFAE L LYGLIV I L
Sbjct: 135 LILIFAEALALYGLIVGIIL 154
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 119 bits (287), Expect = 2e-27
Identities = 56/89 (62%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 ELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAA 432
EL+MKSI+PVVMAG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL+A
Sbjct: 49 ELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSA 108
Query: 433 GFAIGIVGDAGVRGTAQQPRLFVGMILFL 519
G AIGIVGDAGVR AQQP+LFVGMIL L
Sbjct: 109 GMAIGIVGDAGVRANAQQPKLFVGMILIL 137
Score = 55.2 bits (127), Expect = 5e-08
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +2
Query: 143 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAA 238
PFFG +GAA+A++FS +GAAYGTAKSG G+A+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVAS 42
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3
Query: 510 LILIFAEVLGLYGLIVAIYL 569
LILIFAE L LYGLIV I L
Sbjct: 135 LILIFAEALALYGLIVGIIL 154
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 119 bits (287), Expect = 2e-27
Identities = 56/89 (62%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 ELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAA 432
EL+MKSI+PVVMAG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL+A
Sbjct: 49 ELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSA 108
Query: 433 GFAIGIVGDAGVRGTAQQPRLFVGMILFL 519
G AIGIVGDAGVR AQQP+LFVGMIL L
Sbjct: 109 GMAIGIVGDAGVRANAQQPKLFVGMILIL 137
Score = 55.2 bits (127), Expect = 5e-08
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +2
Query: 143 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAA 238
PFFG +GAA+A++FS +GAAYGTAKSG G+A+
Sbjct: 11 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVAS 42
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3
Query: 510 LILIFAEVLGLYGLIVAIYL 569
LILIFAE L LYGLIV I L
Sbjct: 135 LILIFAEALALYGLIVGIIL 154
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 119 bits (287), Expect = 2e-27
Identities = 56/89 (62%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 ELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAA 432
EL+MKSI+PVVMAG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL+A
Sbjct: 51 ELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSA 110
Query: 433 GFAIGIVGDAGVRGTAQQPRLFVGMILFL 519
G AIGIVGDAGVR AQQP+LFVGMIL L
Sbjct: 111 GMAIGIVGDAGVRANAQQPKLFVGMILIL 139
Score = 55.2 bits (127), Expect = 5e-08
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +2
Query: 143 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAA 238
PFFG +GAA+A++FS +GAAYGTAKSG G+A+
Sbjct: 13 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVAS 44
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3
Query: 510 LILIFAEVLGLYGLIVAIYL 569
LILIFAE L LYGLIV I L
Sbjct: 137 LILIFAEALALYGLIVGIIL 156
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 119 bits (287), Expect = 2e-27
Identities = 56/89 (62%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 ELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPA-NYPLYKGFIHLGAGLAVGFSGLAA 432
EL+MKSI+PVVMAG++ IYGL++AV+I+ + A +Y L+ G+ HL +GLA G +GL+A
Sbjct: 50 ELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSA 109
Query: 433 GFAIGIVGDAGVRGTAQQPRLFVGMILFL 519
G AIGIVGDAGVR AQQP+LFVGMIL L
Sbjct: 110 GMAIGIVGDAGVRANAQQPKLFVGMILIL 138
Score = 55.2 bits (127), Expect = 5e-08
Identities = 22/32 (68%), Positives = 29/32 (90%)
Frame = +2
Query: 143 PFFGVMGAASAIIFSALGAAYGTAKSGTGIAA 238
PFFG +GAA+A++FS +GAAYGTAKSG G+A+
Sbjct: 12 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVAS 43
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3
Query: 510 LILIFAEVLGLYGLIVAIYL 569
LILIFAE L LYGLIV I L
Sbjct: 136 LILIFAEALALYGLIVGIIL 155
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Frame = +1
Query: 268 KSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLYK------GFIHLGAGLAVGFSGLA 429
K++I V+ +AIYG++VA+++ L+ + +Y G+ +G+ VGF+ L
Sbjct: 65 KNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLV 124
Query: 430 AGFAIGIVGDAGVRGTAQQPRLFVGMIL 513
G +GI+G + AQ LFV +++
Sbjct: 125 CGLCVGIIGSSCALSDAQNSTLFVKILV 152
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Frame = +1
Query: 268 KSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLYK------GFIHLGAGLAVGFSGLA 429
K++I V+ +AIYG++VA+++ L+ + +Y G+ +G+ VGF+ L
Sbjct: 63 KNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANLV 122
Query: 430 AGFAIGIVGDAGVRGTAQQPRLFVGMIL 513
G +GI+G + AQ LFV +++
Sbjct: 123 CGLCVGIIGSSCALSDAQNSTLFVKILV 150
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 31.5 bits (68), Expect = 0.64
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 473 PRTPASPTMPMAKPAARPENPTAKPAP 393
P+ +PT P KPA P P KPAP
Sbjct: 53 PKPKPAPTPPKPKPAPAPTPPKPKPAP 79
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = -1
Query: 473 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPL*RG*LAGSWRAPAIRTATTRP*MAIIP 294
P+ +PT P KP P P KPAP P + A + P + A T P P
Sbjct: 42 PKPTPAPTPPKPKPKPAPTPPKPKPAPAPTPPKPKPAPAPTPPKPKPKPAPTPPNPKPTP 101
Query: 293 AMT 285
A T
Sbjct: 102 APT 104
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 473 PRTPASPTMPMAKPAARPENPTAKPAP 393
P+ +PT P KP P P KPAP
Sbjct: 86 PKPKPAPTPPNPKPTPAPTPPKPKPAP 112
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 473 PRTPASPTMPMAKPAARPENPTAKPAP 393
P+ +PT P KP P P KP P
Sbjct: 31 PKPAPAPTPPKPKPTPAPTPPKPKPKP 57
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 473 PRTPASPTMPMAKPAARPENPTAKPAPK 390
P+ +PT P KPA P PT P PK
Sbjct: 97 PKPTPAPTPPKPKPAPAPA-PTPAPKPK 123
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 473 PRTPASPTMPMAKPAARPENPTAKPAP 393
P A P MPMA P P P+ P+P
Sbjct: 78 PMPMAPPPMPMASPPMMPMTPSTSPSP 104
>At5g65910.1 68418.m08296 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 432
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = -1
Query: 701 NPMQVGPATGDDHPCARLQTQIMS---IEARSTGDGSGVCSGRLFCVQVDGDDKSVKTQY 531
NP++ D HP + QI+ IE RST S S R VQVD +D +
Sbjct: 289 NPVESSDVETDKHPIESKEIQIVDKSVIEERSTSTAS---SSRFINVQVDDEDDDDADDW 345
Query: 530 FSENKNKII 504
++ + +
Sbjct: 346 LNDEETSSV 354
>At4g15610.1 68417.m02381 integral membrane family protein contains
TIGRFAM TIGR01569 : plant integral membrane protein
TIGR01569; contains Pfam PF04535 : Domain of unknown
function (DUF588)
Length = 193
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 160 GGGVCY-HLQRLGSCLWN--CQVRNWYCRHVGDEAELIMKSIIPVVMAGIIAIYGL 318
GGGV Y L+ W C + + +CRHVG + + + + +++ II++ L
Sbjct: 133 GGGVAYLGLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSL 188
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 473 PRTPASPTMPMAKPAARPENPTAKPAPKWMNP 378
P TP PT P P + P+ PT KP P P
Sbjct: 125 PSTPKPPTKP---PPSTPKPPTTKPPPSTPKP 153
>At2g41700.1 68415.m05151 ABC transporter family protein similar to
ATP-binding cassette transporter ABCA1 GI:18031705 from
[Arabidopsis thaliana]
Length = 1822
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 409 VGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILFLFSLKYWVFTDLSSPST 567
+ FS + A FA+ IV + V+ QQ V ++ + S W F PST
Sbjct: 1118 IAFSFIPASFAVPIVKEREVKAKHQQLISGVSVLSYWLSTYVWDFISFLFPST 1170
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 508 ILFLFSLKYWVFTDLSSPSTCTQNKRPEHTPLPSP 612
I F+L FT L++ + C N P+H P+PSP
Sbjct: 9 IALFFALNIIFFT-LTAATDCGCNPSPKHKPVPSP 42
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 473 PRTPASPTMPMAKPAARPENPTAKPAP 393
P+TPAS + P+A RP P P P
Sbjct: 108 PQTPASVSAPVAPAPTRPPPPAPTPTP 134
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 473 PRTPASPTMPMAKPAARPENPTAKPAP 393
P+TPAS + P+A RP P P P
Sbjct: 108 PQTPASVSAPVAPAPTRPPPPAPTPTP 134
>At2g17820.1 68415.m02064 histidine kinase 1 99% identical to
GP:4586626
Length = 1207
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -3
Query: 462 CISHDAYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGT-SNQDSHDQTVDGNNTRHD 286
C S D+ ET + + S + + P +K +L++ T SN DS ++ N +
Sbjct: 966 CSSDDS-SETSGEKQVDKSVKPSTLHSPVLKN---YLIDATTSNDDSTSASMTQKNPEEE 1021
Query: 285 DRNDRLHDQLSL 250
D DRL+ ++L
Sbjct: 1022 DWKDRLYSGIAL 1033
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -1
Query: 476 VPRTPAS-----PTMPMAKPAARPENPTAKPAPKWMNPL 375
VP TP PT P+ KP+ P P KP+P P+
Sbjct: 431 VPTTPVHKPTPVPTTPVQKPSPVPTTPVQKPSPVPTTPV 469
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -1
Query: 476 VPRTPAS-----PTMPMAKPAARPENPTAKPAPKWMNPL 375
VP TP PT P+ KP+ P P +P+P P+
Sbjct: 442 VPTTPVQKPSPVPTTPVQKPSPVPTTPVHEPSPVLATPV 480
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 479 AVPRTPASPTMPMAKPAARPENPTAKPAP 393
A P TP + P P PE+P + PAP
Sbjct: 132 APPTTPITSPSPPTNPPPPPESPPSLPAP 160
>At5g57160.1 68418.m07140 DNA ligase IV identical to DNA ligase IV
GI:9651815 from [Arabidopsis thaliana]; identical to
cDNA DNA ligase IV, GI:9651814
Length = 1219
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 645 LKTRTGMVVAGSGSNLHRVSEHPSHSCILH 734
LK R ++V G N+HR S PS S ++H
Sbjct: 371 LKGRLEVLVPEGGLNVHRPSGEPSWSIVVH 400
>At3g62680.1 68416.m07041 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 313
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 508 ILFLFSLKYWVFTDLSSPSTCTQNKRPEHTP-LPSPV 615
I + SL D SPS+ K PEH P LPSPV
Sbjct: 10 ICLILSLVTITTADYYSPSSPPVYKSPEHKPTLPSPV 46
>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
similar to PRLI-interacting factor L [Arabidopsis
thaliana] GI:11139268; contains Pfam profile PF02492:
Cobalamin synthesis protein/P47K
Length = 444
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 390 VDEPFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHD 262
VD +V G+ G+ LE + + D D ++ HD +D HD
Sbjct: 283 VDLDYVLGIGGFDLERIESSVNEDDKGDHHDHDHDHHHDHNHD 325
>At4g36550.1 68417.m05190 U-box domain-containing protein low
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 577
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 470 RTPASPTMPMAKPAARPENPTAKPAPK 390
RT ASPT + P PE P+PK
Sbjct: 534 RTTASPTSQVVTPVTHPEPVKITPSPK 560
>At2g29050.1 68415.m03531 rhomboid family protein contains PFAM
domain PF01694, Rhomboid family
Length = 389
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 172 CYHLQRLGSCLWNCQVRNWYCR--HVGDEAEL 261
C++L + + LW+C+ +N YC +G + L
Sbjct: 328 CHYLSCIPTSLWSCKSQNVYCESSQIGQQMNL 359
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,200,153
Number of Sequences: 28952
Number of extensions: 441772
Number of successful extensions: 1518
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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