Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30103
         (480 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    38   0.005
AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical ...    30   0.76 
Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical pr...    30   1.00 
AC090999-25|AAK26157.2|  921|Caenorhabditis elegans Hypothetical...    28   4.0  
Z81525-5|CAB54242.1|  168|Caenorhabditis elegans Hypothetical pr...    27   5.3  
Z69637-3|CAA93468.1|  173|Caenorhabditis elegans Hypothetical pr...    27   7.0  

>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 37.5 bits (83), Expect = 0.005
 Identities = 14/38 (36%), Positives = 26/38 (68%)
 Frame = +3

Query: 141 FEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEK 254
           FE F K++NR+YKD+++ +  + +F K    +++LN K
Sbjct: 43  FEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAK 80



 Score = 28.7 bits (61), Expect = 2.3
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 263 TTFGINKFADYTPEEQQSRLGLRLPAKKT 349
           T FGINKF+D +  E   RL   +P+  T
Sbjct: 88  TQFGINKFSDLSTAEFHGRLSNVVPSNNT 116


>AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2D.1 protein.
          Length = 382

 Score = 30.3 bits (65), Expect = 0.76
 Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
 Frame = +3

Query: 42  FVSVALLIATVVMASSAETDTPR-HYDLNQAKELFEIFV---KEHNREYKDDADRELHYQ 209
           F++    +    + SS+E +    + D +  +++++ FV   K+ +R YK +A+ +L  Q
Sbjct: 7   FLNFQAFLGIFALESSSEPEFFEINIDRDHPEKVYQEFVEFKKKFSRTYKSEAENQLRLQ 66

Query: 210 SFKKHLAEINQLNE 251
           +F K    + +LN+
Sbjct: 67  NFVKSRNNVVRLNK 80


>Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical
           protein C50F4.3 protein.
          Length = 374

 Score = 29.9 bits (64), Expect = 1.00
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 141 FEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNE 251
           FE F+ ++ R YKD+ +++  +Q F      + ++N+
Sbjct: 47  FEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNK 83


>AC090999-25|AAK26157.2|  921|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.18 protein.
          Length = 921

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -3

Query: 295 IISKFVNAKRSIWIFSFNWFISAKCFL 215
           I+ +   +++S+W   F WFIS++ F+
Sbjct: 478 IVVEVKKSRKSMWFEKFRWFISSEGFI 504


>Z81525-5|CAB54242.1|  168|Caenorhabditis elegans Hypothetical
           protein F33A8.7 protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +3

Query: 39  NFVSVAL-LIATVVMASSAE-TDTPRHYDLNQ 128
           N+V V L L+ATVV+++ A+ TD     DLNQ
Sbjct: 7   NYVLVLLVLLATVVLSNQAQDTDVQHRKDLNQ 38


>Z69637-3|CAA93468.1|  173|Caenorhabditis elegans Hypothetical
           protein F35G2.3 protein.
          Length = 173

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +3

Query: 45  VSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYK 179
           V+VALL+  +V     E     HY L    E  E  +KEH +E K
Sbjct: 14  VTVALLMLQIV-----EEKAKAHYQLKLMCESSEEMIKEHQKEMK 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,275,104
Number of Sequences: 27780
Number of extensions: 194763
Number of successful extensions: 633
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)